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The map label for this gene is yoaB [C]

Identifier: 159185063

GI number: 159185063

Start: 2096349

End: 2096690

Strand: Reverse

Name: yoaB [C]

Synonym: Atu2130

Alternate gene names: 159185063

Gene position: 2096690-2096349 (Counterclockwise)

Preceding gene: 159185064

Following gene: 159185059

Centisome position: 73.79

GC content: 61.4

Gene sequence:

>342_bases
ATGACCATCAAGCGTATCGAGCCGGGCAAGCGCATGAGCGGCGCCGTCGTTCACGGCAACACCGTTTATTTGGCCGGCCA
GGTTGGCGAAGGCACTGGTGTGACGGAACAGAGCAAGTCGGCTCTCGCTGAAGTCGACCGCCTGCTGGCCGCTGCCGGTT
CCGACAAGTCGAAGATCCTGCAGACCATCATCTACCTCTCCGACATGTCCACCTTCGGCGAAATGAACGCCGTCTGGGAA
GGCTGGATCGACCCGGCAAACCCGCCAGCCCGCGCCACCAGCGAAGCAGCGCTGGCAACGCCGGACTACAAGGTTGAGTT
TATCGTAACTGCCGCTCTCTGA

Upstream 100 bases:

>100_bases
CCGGTGCGCGCTCGACGGCAATCTACGAAAAGACCCATCACCTGCGCGGCTGATTTTCCGCGCATCTTTGAATTTTAATG
CCAATCAACAGGAGTTTTCC

Downstream 100 bases:

>100_bases
GCGACGGTTTGATCTATGGGAAGGCCGGGTCGTGGAAGCGGCCCGGCCTTTTTTGATGGGATAATCAAAACATTCGTTTC
GTCATCCTCGGGCTTGTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MTIKRIEPGKRMSGAVVHGNTVYLAGQVGEGTGVTEQSKSALAEVDRLLAAAGSDKSKILQTIIYLSDMSTFGEMNAVWE
GWIDPANPPARATSEAALATPDYKVEFIVTAAL

Sequences:

>Translated_113_residues
MTIKRIEPGKRMSGAVVHGNTVYLAGQVGEGTGVTEQSKSALAEVDRLLAAAGSDKSKILQTIIYLSDMSTFGEMNAVWE
GWIDPANPPARATSEAALATPDYKVEFIVTAAL
>Mature_112_residues
TIKRIEPGKRMSGAVVHGNTVYLAGQVGEGTGVTEQSKSALAEVDRLLAAAGSDKSKILQTIIYLSDMSTFGEMNAVWEG
WIDPANPPARATSEAALATPDYKVEFIVTAAL

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=115, Percent_Identity=40.8695652173913, Blast_Score=91, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 11955; Mature: 11824

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKRIEPGKRMSGAVVHGNTVYLAGQVGEGTGVTEQSKSALAEVDRLLAAAGSDKSKIL
CCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
QTIIYLSDMSTFGEMNAVWEGWIDPANPPARATSEAALATPDYKVEFIVTAAL
HHHHHHHCCCCHHCCHHHHHCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECC
>Mature Secondary Structure 
TIKRIEPGKRMSGAVVHGNTVYLAGQVGEGTGVTEQSKSALAEVDRLLAAAGSDKSKIL
CCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
QTIIYLSDMSTFGEMNAVWEGWIDPANPPARATSEAALATPDYKVEFIVTAAL
HHHHHHHCCCCHHCCHHHHHCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]