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The map label for this gene is chvD [C]

Identifier: 159185059

GI number: 159185059

Start: 2089478

End: 2091127

Strand: Reverse

Name: chvD [C]

Synonym: Atu2125

Alternate gene names: 159185059

Gene position: 2091127-2089478 (Counterclockwise)

Preceding gene: 159185063

Following gene: 15889405

Centisome position: 73.59

GC content: 59.88

Gene sequence:

>1650_bases
ATGGCACGTCAATTCATCTATCACATGGCTGGGCTGAACAAGTCCTATGGCGCGAAGAAGGTTCTGGAGAACGTCCATCT
CTCCTTCTACCCCGATGCCAAGATCGGTATCCTCGGCCCGAACGGCGCCGGTAAGTCGACCGTTCTCAAAATCATGGCTG
GCCTCGACAAGGAATATACCGGTGAAGCCTGGCTCGCCGAGGGTGCGACGCTCGGTTATCTCGAGCAGGAGCCGAAGCTC
GACGAGAACAAGACCGTGATGGAAAACGTCATGGAAGGCGTGGCGAGCAAGACGGCGATCGTCGACCGCTACAACGAATT
GATGATGAACTATTCCGACGAAACGGCGGATGAGGGCGCAAAGCTCCAGGACATGATCGACAGCCAGAACCTGTGGGATC
TGGAAAATCAGGTCGAAATGGCCATGGATGCGCTGCGTTGCCCGCCCGGCGACTCTGCCGTAACCGGCCTTTCGGGTGGT
GAGCGCCGCCGTGTGGCGCTTTGCAAGCTCTTGCTTTCGCAGCCTGACCTGCTGCTGCTTGACGAACCGACCAACCATCT
GGACGCCGAAACCATCGCCTGGCTCGAAAAGCACCTGCGCGACTATCCCGGCGCCGTGATGATGATCACCCACGACCGCT
ACTTCCTCGACAACGTCACCGGCTGGATTCTCGAACTCGACCGTGGCCGCGGCATTCCCTACGAAGGCAACTACTCCGCC
TATCTGCAGGCAAAAGCCAAGCGCATGCAGCAGGAAGCCCGTGAAGACGCCTCGCGCCAGAAGGCGATCAGCCGCGAGCA
GGAATGGATCGCTTCCAGCCCCAAGGCTCGCCAGACGAAGTCCAAGGCGCGTATCCGCGCTTATGACGAGCTGGTGGAAG
CCGCTGAAAACCGTCGTCCCGGCGACGCGCAGATCGTCATTCCGGTCGCCGAGCGTCTGGGCCGTGTCGTTATCGAAGCG
GAAAACCTCACCAAGTCCTATGGCGATCGGGTTCTCATCGAAAACCTGACCTTCAAGCTGCCTCCGGGCGGCATTGTCGG
TGTCATCGGCCCGAACGGTGCAGGTAAGACCACACTGTTTCGCATGATCACCGGTCAGGAACAGCCAGATAGCGGTTCGG
TGACCGTTGGCGAGACCGTGCACCTCGGATACGTCGACCAGAGCCGCGATACGCTGGCCGGTGACAAAACCGTCTGGGAG
GAAATCTCCGGCGGCAACGACATCATCAAGCTCGGCAAGTTCGAAGTGAACTCGCGCGCCTATTGCGGCGCCTTCAACTT
CAAGGGCGGCGATCAGCAGCAGAAGGTCGGCAATCTCTCGGGTGGTCAGCGCAACCGCGTGCACCTTGCCAAGATGCTGA
AGGCCGGCGGCAACGTGCTACTGCTCGACGAACCGACCAACGACCTTGACACCGAAACGCTGGCAGCCCTTGAAGAAGCG
CTGGAAGCCTTCGCGGGTTGCGCCGTTATCATCAGCCACGACCGCATGTTCCTTGACCGTCTGGCCACCCACATCCTCGC
TTTCGAGGGTGACAGCCATGTGGAATGGTTCGAAGGCAACTTCGAAGATTACGAAAAGGACAAGGTCCGCCGTCTCGGCC
CGGAAAGCATCAAGCCCGGCCGGGTGAGTTACAAGCGCCTGACGCGCTGA

Upstream 100 bases:

>100_bases
ATAATCGTGCCAGAGGTTGCCCCAAGGTCCTATTTACCCTACATAGCGGCAAATTTCCCGATACGTACTCTTAAAAATCC
GATGTGGAGCATTCGCTACA

Downstream 100 bases:

>100_bases
TCCTCTTGTCGAATCTCTTCGGAAAGGCCCGCCGCAAAGCGGGCCTTTTCTCGTGCAATAATTCGACTTGAAGACGGCGC
ATGACACTTTGCGCTTGCAT

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 549; Mature: 548

Protein sequence:

>549_residues
MARQFIYHMAGLNKSYGAKKVLENVHLSFYPDAKIGILGPNGAGKSTVLKIMAGLDKEYTGEAWLAEGATLGYLEQEPKL
DENKTVMENVMEGVASKTAIVDRYNELMMNYSDETADEGAKLQDMIDSQNLWDLENQVEMAMDALRCPPGDSAVTGLSGG
ERRRVALCKLLLSQPDLLLLDEPTNHLDAETIAWLEKHLRDYPGAVMMITHDRYFLDNVTGWILELDRGRGIPYEGNYSA
YLQAKAKRMQQEAREDASRQKAISREQEWIASSPKARQTKSKARIRAYDELVEAAENRRPGDAQIVIPVAERLGRVVIEA
ENLTKSYGDRVLIENLTFKLPPGGIVGVIGPNGAGKTTLFRMITGQEQPDSGSVTVGETVHLGYVDQSRDTLAGDKTVWE
EISGGNDIIKLGKFEVNSRAYCGAFNFKGGDQQQKVGNLSGGQRNRVHLAKMLKAGGNVLLLDEPTNDLDTETLAALEEA
LEAFAGCAVIISHDRMFLDRLATHILAFEGDSHVEWFEGNFEDYEKDKVRRLGPESIKPGRVSYKRLTR

Sequences:

>Translated_549_residues
MARQFIYHMAGLNKSYGAKKVLENVHLSFYPDAKIGILGPNGAGKSTVLKIMAGLDKEYTGEAWLAEGATLGYLEQEPKL
DENKTVMENVMEGVASKTAIVDRYNELMMNYSDETADEGAKLQDMIDSQNLWDLENQVEMAMDALRCPPGDSAVTGLSGG
ERRRVALCKLLLSQPDLLLLDEPTNHLDAETIAWLEKHLRDYPGAVMMITHDRYFLDNVTGWILELDRGRGIPYEGNYSA
YLQAKAKRMQQEAREDASRQKAISREQEWIASSPKARQTKSKARIRAYDELVEAAENRRPGDAQIVIPVAERLGRVVIEA
ENLTKSYGDRVLIENLTFKLPPGGIVGVIGPNGAGKTTLFRMITGQEQPDSGSVTVGETVHLGYVDQSRDTLAGDKTVWE
EISGGNDIIKLGKFEVNSRAYCGAFNFKGGDQQQKVGNLSGGQRNRVHLAKMLKAGGNVLLLDEPTNDLDTETLAALEEA
LEAFAGCAVIISHDRMFLDRLATHILAFEGDSHVEWFEGNFEDYEKDKVRRLGPESIKPGRVSYKRLTR
>Mature_548_residues
ARQFIYHMAGLNKSYGAKKVLENVHLSFYPDAKIGILGPNGAGKSTVLKIMAGLDKEYTGEAWLAEGATLGYLEQEPKLD
ENKTVMENVMEGVASKTAIVDRYNELMMNYSDETADEGAKLQDMIDSQNLWDLENQVEMAMDALRCPPGDSAVTGLSGGE
RRRVALCKLLLSQPDLLLLDEPTNHLDAETIAWLEKHLRDYPGAVMMITHDRYFLDNVTGWILELDRGRGIPYEGNYSAY
LQAKAKRMQQEAREDASRQKAISREQEWIASSPKARQTKSKARIRAYDELVEAAENRRPGDAQIVIPVAERLGRVVIEAE
NLTKSYGDRVLIENLTFKLPPGGIVGVIGPNGAGKTTLFRMITGQEQPDSGSVTVGETVHLGYVDQSRDTLAGDKTVWEE
ISGGNDIIKLGKFEVNSRAYCGAFNFKGGDQQQKVGNLSGGQRNRVHLAKMLKAGGNVLLLDEPTNDLDTETLAALEEAL
EAFAGCAVIISHDRMFLDRLATHILAFEGDSHVEWFEGNFEDYEKDKVRRLGPESIKPGRVSYKRLTR

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=571, Percent_Identity=27.1453590192644, Blast_Score=189, Evalue=8e-48,
Organism=Homo sapiens, GI27881506, Length=522, Percent_Identity=27.5862068965517, Blast_Score=173, Evalue=4e-43,
Organism=Homo sapiens, GI10947137, Length=522, Percent_Identity=27.5862068965517, Blast_Score=173, Evalue=4e-43,
Organism=Homo sapiens, GI10947135, Length=543, Percent_Identity=27.4401473296501, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI69354671, Length=543, Percent_Identity=27.4401473296501, Blast_Score=167, Evalue=3e-41,
Organism=Homo sapiens, GI9955963, Length=249, Percent_Identity=28.1124497991968, Blast_Score=73, Evalue=8e-13,
Organism=Escherichia coli, GI2367384, Length=553, Percent_Identity=55.877034358047, Blast_Score=635, Evalue=0.0,
Organism=Escherichia coli, GI1787182, Length=527, Percent_Identity=35.4838709677419, Blast_Score=318, Evalue=6e-88,
Organism=Escherichia coli, GI1789751, Length=531, Percent_Identity=31.8267419962335, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI1787041, Length=530, Percent_Identity=31.3207547169811, Blast_Score=244, Evalue=1e-65,
Organism=Escherichia coli, GI87081782, Length=539, Percent_Identity=25.2319109461967, Blast_Score=118, Evalue=8e-28,
Organism=Escherichia coli, GI48994943, Length=497, Percent_Identity=23.7424547283702, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI1790190, Length=534, Percent_Identity=24.1573033707865, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788225, Length=241, Percent_Identity=30.7053941908714, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1788472, Length=506, Percent_Identity=22.9249011857708, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI87081709, Length=192, Percent_Identity=29.1666666666667, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1786975, Length=348, Percent_Identity=27.0114942528736, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1788761, Length=234, Percent_Identity=27.3504273504274, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI87081791, Length=195, Percent_Identity=32.8205128205128, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1788165, Length=183, Percent_Identity=30.6010928961749, Blast_Score=80, Evalue=5e-16,
Organism=Escherichia coli, GI1786803, Length=214, Percent_Identity=32.2429906542056, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1789891, Length=231, Percent_Identity=26.8398268398268, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1789593, Length=216, Percent_Identity=27.3148148148148, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1790467, Length=163, Percent_Identity=33.7423312883436, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786398, Length=185, Percent_Identity=32.4324324324324, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1789991, Length=510, Percent_Identity=23.5294117647059, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI48995001, Length=231, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI87081834, Length=218, Percent_Identity=26.1467889908257, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1789864, Length=247, Percent_Identity=27.5303643724696, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1790525, Length=230, Percent_Identity=27.3913043478261, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787164, Length=193, Percent_Identity=26.4248704663212, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1789873, Length=223, Percent_Identity=26.0089686098655, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1786563, Length=192, Percent_Identity=28.6458333333333, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1788450, Length=210, Percent_Identity=26.6666666666667, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787089, Length=246, Percent_Identity=23.1707317073171, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI87082267, Length=223, Percent_Identity=25.5605381165919, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787370, Length=193, Percent_Identity=26.9430051813472, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1786703, Length=221, Percent_Identity=28.9592760180996, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1788644, Length=215, Percent_Identity=26.5116279069767, Blast_Score=62, Evalue=7e-11,
Organism=Escherichia coli, GI1790739, Length=216, Percent_Identity=29.6296296296296, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=548, Percent_Identity=27.007299270073, Blast_Score=210, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17553372, Length=548, Percent_Identity=28.1021897810219, Blast_Score=201, Evalue=8e-52,
Organism=Caenorhabditis elegans, GI17555318, Length=528, Percent_Identity=24.0530303030303, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI115534520, Length=280, Percent_Identity=27.1428571428571, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI212646699, Length=221, Percent_Identity=26.6968325791855, Blast_Score=66, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17511077, Length=205, Percent_Identity=27.8048780487805, Blast_Score=66, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=532, Percent_Identity=28.7593984962406, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6321121, Length=543, Percent_Identity=27.8084714548803, Blast_Score=189, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6323278, Length=378, Percent_Identity=28.3068783068783, Blast_Score=124, Evalue=4e-29,
Organism=Saccharomyces cerevisiae, GI6324314, Length=379, Percent_Identity=27.7044854881267, Blast_Score=119, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6325030, Length=378, Percent_Identity=24.8677248677249, Blast_Score=104, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6324985, Length=185, Percent_Identity=30.2702702702703, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24666836, Length=553, Percent_Identity=27.8481012658228, Blast_Score=208, Evalue=9e-54,
Organism=Drosophila melanogaster, GI24642252, Length=548, Percent_Identity=27.1897810218978, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI18859989, Length=548, Percent_Identity=27.1897810218978, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24641342, Length=572, Percent_Identity=27.0979020979021, Blast_Score=194, Evalue=1e-49,
Organism=Drosophila melanogaster, GI24666092, Length=182, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI161078426, Length=178, Percent_Identity=30.8988764044944, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24648279, Length=178, Percent_Identity=30.8988764044944, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21357907, Length=219, Percent_Identity=28.7671232876712, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 60903; Mature: 60772

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARQFIYHMAGLNKSYGAKKVLENVHLSFYPDAKIGILGPNGAGKSTVLKIMAGLDKEYT
CCHHHHHHHHCCCCCCCHHHHHHHCCEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCC
GEAWLAEGATLGYLEQEPKLDENKTVMENVMEGVASKTAIVDRYNELMMNYSDETADEGA
CCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
KLQDMIDSQNLWDLENQVEMAMDALRCPPGDSAVTGLSGGERRRVALCKLLLSQPDLLLL
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHCCCCEEEE
DEPTNHLDAETIAWLEKHLRDYPGAVMMITHDRYFLDNVTGWILELDRGRGIPYEGNYSA
ECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCEEEEEEECCCCCCCCCCCHH
YLQAKAKRMQQEAREDASRQKAISREQEWIASSPKARQTKSKARIRAYDELVEAAENRRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
GDAQIVIPVAERLGRVVIEAENLTKSYGDRVLIENLTFKLPPGGIVGVIGPNGAGKTTLF
CCCEEEEEHHHHCCEEEEEHHHHHHHHCCEEEEECCEEECCCCCEEEEECCCCCCCHHEE
RMITGQEQPDSGSVTVGETVHLGYVDQSRDTLAGDKTVWEEISGGNDIIKLGKFEVNSRA
EEECCCCCCCCCCEEECCEEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEECCEEECCCE
YCGAFNFKGGDQQQKVGNLSGGQRNRVHLAKMLKAGGNVLLLDEPTNDLDTETLAALEEA
EEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
LEAFAGCAVIISHDRMFLDRLATHILAFEGDSHVEWFEGNFEDYEKDKVRRLGPESIKPG
HHHHCCEEEEEECCHHHHHHHHHHHEEECCCCCCEEECCCCCHHHHHHHHHCCCCCCCCC
RVSYKRLTR
CCCHHHHCC
>Mature Secondary Structure 
ARQFIYHMAGLNKSYGAKKVLENVHLSFYPDAKIGILGPNGAGKSTVLKIMAGLDKEYT
CHHHHHHHHCCCCCCCHHHHHHHCCEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCC
GEAWLAEGATLGYLEQEPKLDENKTVMENVMEGVASKTAIVDRYNELMMNYSDETADEGA
CCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
KLQDMIDSQNLWDLENQVEMAMDALRCPPGDSAVTGLSGGERRRVALCKLLLSQPDLLLL
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHCCCCEEEE
DEPTNHLDAETIAWLEKHLRDYPGAVMMITHDRYFLDNVTGWILELDRGRGIPYEGNYSA
ECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCEEEEEEECCCCCCCCCCCHH
YLQAKAKRMQQEAREDASRQKAISREQEWIASSPKARQTKSKARIRAYDELVEAAENRRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
GDAQIVIPVAERLGRVVIEAENLTKSYGDRVLIENLTFKLPPGGIVGVIGPNGAGKTTLF
CCCEEEEEHHHHCCEEEEEHHHHHHHHCCEEEEECCEEECCCCCEEEEECCCCCCCHHEE
RMITGQEQPDSGSVTVGETVHLGYVDQSRDTLAGDKTVWEEISGGNDIIKLGKFEVNSRA
EEECCCCCCCCCCEEECCEEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEECCEEECCCE
YCGAFNFKGGDQQQKVGNLSGGQRNRVHLAKMLKAGGNVLLLDEPTNDLDTETLAALEEA
EEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
LEAFAGCAVIISHDRMFLDRLATHILAFEGDSHVEWFEGNFEDYEKDKVRRLGPESIKPG
HHHHCCEEEEEECCHHHHHHHHHHHEEECCCCCCEEECCCCCHHHHHHHHHCCCCCCCCC
RVSYKRLTR
CCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]