Click here to switch to the map view.

The map label for this gene is yoaV [H]

Identifier: 159185040

GI number: 159185040

Start: 2038211

End: 2039122

Strand: Direct

Name: yoaV [H]

Synonym: Atu2079

Alternate gene names: 159185040

Gene position: 2038211-2039122 (Clockwise)

Preceding gene: 159185039

Following gene: 15889364

Centisome position: 71.73

GC content: 62.17

Gene sequence:

>912_bases
ATGGATGCCCGTGAATGGGCGATGCTGATAGCACTTTCGCTGCTATGGGGCGGATCATTCTTTTTCATCGGCGTCGCGGT
GAAGGAATTGCCCCCCGTCACCATCGTCACCTTGCGCGTCAGCCTTGCGGCCGTGGCGCTGCTGGTCGTCTGCCGCATCA
TGGGCCTTCGTCTGCCGCGTGAATGGGCGGTGTGGCGCGCCTTTTTCGGCATGGGCCTGCTCAACAACATCATTCCCTTC
TGCCTGATCGTCTGGGGCCAGACCCAGATCGCCAGCGGTCTCGCCTCGATCCTCAATGCCACGACGCCGCTCTTCACCGT
CATCGTCGCCCACTTTCTGACCGCCGACGAAAAGATGACCGGCAACAAGCTCGCCGGCGTGCTAATCGGTTTTGTCGGCG
TGGCGACCATGATCGGACCGGCAGCCTTTGGCGGATCATCCGGCCTGTGGGGCCAGATCGCCATTCTCGGCGCGGCCATC
TCCTATTCCTTCGCGGGCATCTTCGGCCGTCGCTTTAAGGCCATGGGCGTGCCGCCGCTGATGACCGCCACCGGGCAGAT
ATCCTCGTCGACATTGATGCTTATCCCCGCCGCACTCCTCATCGACAAACCCTGGACACTCGCCATGCCAGGCCTTGGCA
CCTGGGGGGCGCTGATCGGCATCGCCCTGCTATCGACAGCGCTTGCCTATCTCATCTTCTTCCGCATTCTTGCCAGCGCC
GGCGCCACCAACCTCGCCCTTGTCACCTTCCTCATACCGGTCAGCGCCATTTTACTTGGCTCGCTCATTCTCGGCGAGCA
GCTGGAAATCAAGCACTTCGCGGGCATGGCGATGATCGCCGCCGGACTGGCCGCCATCGATGGAAGGTTACCGGTGAAAC
TTCGAAGCCTGCTGCGCAACGCGCCCGCTTGA

Upstream 100 bases:

>100_bases
AGATAAACTCAACCGATATCGGGTGGATGGCAGCACCCCGATCTGCGACCATGTCAATATTCATACCCCGTGGGAGACGA
AGATGGCGATACAGAAACAG

Downstream 100 bases:

>100_bases
CAGGGTCGCGGGGCAAAAGCATTCTGCGCGCATGATCGCAACGAAACACAACATCACCCGTCGCCATACAATGACCGGCC
ATTCGGCAGGGGAAGGTATG

Product: ABC transporter, membrane spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MDAREWAMLIALSLLWGGSFFFIGVAVKELPPVTIVTLRVSLAAVALLVVCRIMGLRLPREWAVWRAFFGMGLLNNIIPF
CLIVWGQTQIASGLASILNATTPLFTVIVAHFLTADEKMTGNKLAGVLIGFVGVATMIGPAAFGGSSGLWGQIAILGAAI
SYSFAGIFGRRFKAMGVPPLMTATGQISSSTLMLIPAALLIDKPWTLAMPGLGTWGALIGIALLSTALAYLIFFRILASA
GATNLALVTFLIPVSAILLGSLILGEQLEIKHFAGMAMIAAGLAAIDGRLPVKLRSLLRNAPA

Sequences:

>Translated_303_residues
MDAREWAMLIALSLLWGGSFFFIGVAVKELPPVTIVTLRVSLAAVALLVVCRIMGLRLPREWAVWRAFFGMGLLNNIIPF
CLIVWGQTQIASGLASILNATTPLFTVIVAHFLTADEKMTGNKLAGVLIGFVGVATMIGPAAFGGSSGLWGQIAILGAAI
SYSFAGIFGRRFKAMGVPPLMTATGQISSSTLMLIPAALLIDKPWTLAMPGLGTWGALIGIALLSTALAYLIFFRILASA
GATNLALVTFLIPVSAILLGSLILGEQLEIKHFAGMAMIAAGLAAIDGRLPVKLRSLLRNAPA
>Mature_303_residues
MDAREWAMLIALSLLWGGSFFFIGVAVKELPPVTIVTLRVSLAAVALLVVCRIMGLRLPREWAVWRAFFGMGLLNNIIPF
CLIVWGQTQIASGLASILNATTPLFTVIVAHFLTADEKMTGNKLAGVLIGFVGVATMIGPAAFGGSSGLWGQIAILGAAI
SYSFAGIFGRRFKAMGVPPLMTATGQISSSTLMLIPAALLIDKPWTLAMPGLGTWGALIGIALLSTALAYLIFFRILASA
GATNLALVTFLIPVSAILLGSLILGEQLEIKHFAGMAMIAAGLAAIDGRLPVKLRSLLRNAPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI87081929, Length=277, Percent_Identity=27.4368231046931, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788269, Length=265, Percent_Identity=27.5471698113208, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31832; Mature: 31832

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAREWAMLIALSLLWGGSFFFIGVAVKELPPVTIVTLRVSLAAVALLVVCRIMGLRLPR
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCH
EWAVWRAFFGMGLLNNIIPFCLIVWGQTQIASGLASILNATTPLFTVIVAHFLTADEKMT
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC
GNKLAGVLIGFVGVATMIGPAAFGGSSGLWGQIAILGAAISYSFAGIFGRRFKAMGVPPL
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
MTATGQISSSTLMLIPAALLIDKPWTLAMPGLGTWGALIGIALLSTALAYLIFFRILASA
HHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GATNLALVTFLIPVSAILLGSLILGEQLEIKHFAGMAMIAAGLAAIDGRLPVKLRSLLRN
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC
APA
CCC
>Mature Secondary Structure
MDAREWAMLIALSLLWGGSFFFIGVAVKELPPVTIVTLRVSLAAVALLVVCRIMGLRLPR
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCH
EWAVWRAFFGMGLLNNIIPFCLIVWGQTQIASGLASILNATTPLFTVIVAHFLTADEKMT
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC
GNKLAGVLIGFVGVATMIGPAAFGGSSGLWGQIAILGAAISYSFAGIFGRRFKAMGVPPL
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
MTATGQISSSTLMLIPAALLIDKPWTLAMPGLGTWGALIGIALLSTALAYLIFFRILASA
HHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GATNLALVTFLIPVSAILLGSLILGEQLEIKHFAGMAMIAAGLAAIDGRLPVKLRSLLRN
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC
APA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]