Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is cheW [H]
Identifier: 159185039
GI number: 159185039
Start: 2035226
End: 2035693
Strand: Direct
Name: cheW [H]
Synonym: Atu2075
Alternate gene names: 159185039
Gene position: 2035226-2035693 (Clockwise)
Preceding gene: 15889354
Following gene: 159185040
Centisome position: 71.62
GC content: 60.04
Gene sequence:
>468_bases ATGTCCAACGCCATCAAGCAATCCGGCGCATATCTCGAAATCGTTTCCTTCCATCTGAGCGATCAGGAATTCTGCATCGA CATCATGGCGATCCGCGAAATTCGCGGTTGGGCGCCGGTTACCCCGATGCCGCACACGCCGCCTTATGTTCTCGGCCTCA TCAACCTGCGCGGCGCCGTTATTCCCGTCATCGACATGGCCGGCCGCCTCGGCATGAAAATGACCGAACCGTCCGAACGC TCCGCCATCATCGTCACCGATATCGGCGGCAAGCTGGTCGGACTTCTGGTGGAACAGGTCTCCGACATGATGACCATCCG CTCGGAAGACCTGCAGCCCGCGCCCGATATCATTCCGGAAGAGCAGCGTAGCTTCTGCCGCGGCATCGTGGCGCTGGAAA AGAGCATGGTCTGCTTCCTCAACCTCGACACCGTCATTGCGGACGAGTTGGCGCGCGAAGCGGCCTGA
Upstream 100 bases:
>100_bases TTCAATCCTCGACATGATGTCTCCCGGTCCATTCCGGCCACCGCATAAAGCTCAATCCTGCGTGGGCCTGTTAGAGAGCC ATCAGAGGAAACCTGCCGTC
Downstream 100 bases:
>100_bases TCATGTCACCGAGTTTTCAAAATTAACGGGCAGGTTCTGCGGCTCGACCTGAGGGACGCGCCAACGTCGCAAACCCCTCC TCCGTCATGCTCGGGCCTGT
Product: chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSNAIKQSGAYLEIVSFHLSDQEFCIDIMAIREIRGWAPVTPMPHTPPYVLGLINLRGAVIPVIDMAGRLGMKMTEPSER SAIIVTDIGGKLVGLLVEQVSDMMTIRSEDLQPAPDIIPEEQRSFCRGIVALEKSMVCFLNLDTVIADELAREAA
Sequences:
>Translated_155_residues MSNAIKQSGAYLEIVSFHLSDQEFCIDIMAIREIRGWAPVTPMPHTPPYVLGLINLRGAVIPVIDMAGRLGMKMTEPSER SAIIVTDIGGKLVGLLVEQVSDMMTIRSEDLQPAPDIIPEEQRSFCRGIVALEKSMVCFLNLDTVIADELAREAA >Mature_154_residues SNAIKQSGAYLEIVSFHLSDQEFCIDIMAIREIRGWAPVTPMPHTPPYVLGLINLRGAVIPVIDMAGRLGMKMTEPSERS AIIVTDIGGKLVGLLVEQVSDMMTIRSEDLQPAPDIIPEEQRSFCRGIVALEKSMVCFLNLDTVIADELAREAA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=137, Percent_Identity=30.6569343065693, Blast_Score=100, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 17011; Mature: 16880
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAIKQSGAYLEIVSFHLSDQEFCIDIMAIREIRGWAPVTPMPHTPPYVLGLINLRGAV CCCCHHHCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEHHHHCCHH IPVIDMAGRLGMKMTEPSERSAIIVTDIGGKLVGLLVEQVSDMMTIRSEDLQPAPDIIPE HHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH EQRSFCRGIVALEKSMVCFLNLDTVIADELAREAA HHHHHHHHHHHHHHCEEEEEECHHHHHHHHHHHCC >Mature Secondary Structure SNAIKQSGAYLEIVSFHLSDQEFCIDIMAIREIRGWAPVTPMPHTPPYVLGLINLRGAV CCCHHHCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEHHHHCCHH IPVIDMAGRLGMKMTEPSERSAIIVTDIGGKLVGLLVEQVSDMMTIRSEDLQPAPDIIPE HHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH EQRSFCRGIVALEKSMVCFLNLDTVIADELAREAA HHHHHHHHHHHHHHCEEEEEECHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7623670; 11481430 [H]