Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 159185036
Identifier: 159185036
GI number: 159185036
Start: 2029228
End: 2029464
Strand: Reverse
Name: 159185036
Synonym: Atu2067
Alternate gene names: NA
Gene position: 2029464-2029228 (Counterclockwise)
Preceding gene: 15889355
Following gene: 15889350
Centisome position: 71.42
GC content: 54.43
Gene sequence:
>237_bases ATGCTGGAAAAGCAGGAAAAGGCGGCTCTGGCCACACGCATCCGGGACTATCTTACCCGCGAGACGGAAACTGAAATCGG TCTTCTTCAGGCGGAAATCTTCGTGGATTTTCTGGCCGACGAAATGGGGTATGTGTTTTACAATCAGGGCCTTAGGGATG CCCATGCGGCGATCCTGCGGCGTCTTGACGATGCGGCTGCTGATATCGATGTGCTGGAGAAACCGAAGCTGCGCTAA
Upstream 100 bases:
>100_bases AGCTTCCGTTACGGTAACGCCTCACGCGGCCCGCGCCGCGGAGGGCTGCGTCGCCATTTTCTTCGCGCGTGCGCTTATGT GGTCAGATGGTGGAGGATCG
Downstream 100 bases:
>100_bases GGGCGCGGCGCTAGTTCCGCAATATGTCGCGGCTCTTGAGAATGACCGCGCCTTTTTCCCGCATGGCTGCCACCGCGGCT TTGATGCCCTGCGGGTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MLEKQEKAALATRIRDYLTRETETEIGLLQAEIFVDFLADEMGYVFYNQGLRDAHAAILRRLDDAAADIDVLEKPKLR
Sequences:
>Translated_78_residues MLEKQEKAALATRIRDYLTRETETEIGLLQAEIFVDFLADEMGYVFYNQGLRDAHAAILRRLDDAAADIDVLEKPKLR >Mature_78_residues MLEKQEKAALATRIRDYLTRETETEIGLLQAEIFVDFLADEMGYVFYNQGLRDAHAAILRRLDDAAADIDVLEKPKLR
Specific function: Unknown
COG id: COG5460
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8969; Mature: 8969
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEKQEKAALATRIRDYLTRETETEIGLLQAEIFVDFLADEMGYVFYNQGLRDAHAAILR CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH RLDDAAADIDVLEKPKLR HHHHHHHCCHHCCCCCCC >Mature Secondary Structure MLEKQEKAALATRIRDYLTRETETEIGLLQAEIFVDFLADEMGYVFYNQGLRDAHAAILR CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH RLDDAAADIDVLEKPKLR HHHHHHHCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA