Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185030
Identifier: 159185030
GI number: 159185030
Start: 2022516
End: 2023136
Strand: Direct
Name: 159185030
Synonym: Atu2058
Alternate gene names: NA
Gene position: 2022516-2023136 (Clockwise)
Preceding gene: 159185029
Following gene: 159185032
Centisome position: 71.18
GC content: 58.45
Gene sequence:
>621_bases ATGCATGGCCGCCGCACCTCGCCGCCGGAAATCGGCTGCTATCTCAGCCATGTCGCCTGCGCCAATAAATTCATGACTGG TGATGCCGATATCGCGCTCATCCTTGAGGACGACGTGGTCTTCGAGGACGATTTTCTTGATGCCATTGATGAAGCGGTTC TAAACGGTAACGACTGGGATATTCTGCGGCTGACGACGGTCAGCAACGGCCGCAAATTTGCATTCCGCGCCCTGTCCAAT GGCCGATCGCTCGCAGTGGCGCTCACCCGCGAAAAAGGATCGGGCGCCTATCTCGTCAACCGCCGCGCCGGAAAATGGAT ATCGAAACTTATCCCCATGCGGCTCGCCTACGACATCGCCTTCGATCTGGAATATCTCTCCGGCCTAAAGGCGGCCTTCA TCTATCCACTCTGCGCCACACAGGATGCAGACGGCGAAAGCCAGATCCAGAACAATCTGCGCATCTACCGCCTGCCGCGC TGGCGGTACTTCACCGTTCTGCCCTATCGCGCCTATCTGGAAACCAGCCGGTTTCTGCTGCGCGGCCTGCGCTTCCTGGT GGCAAAGGCGAAAGTGGCCATGGAACGCGGCAAACCCAAAGCTGTTCAGGCCGGCAGATGA
Upstream 100 bases:
>100_bases CCTCGATGCGATGGGGCTAAAGGCGGAGCGCGTTGCCGGCGTCAATGGCAGGGAGCTGCAATACCCGATCCCGGAATTCA GCGAAATTTCCTATATGCTT
Downstream 100 bases:
>100_bases ACGTCCGGCTCATACCTCGCCGGGCGTGAAGCCGACGAGATAGACGGCCGCGATCACGGCTGCGAGAATGAAAATAGAGA TGACGAAAATCGTCATCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Family; Glycosyl Transferase
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MHGRRTSPPEIGCYLSHVACANKFMTGDADIALILEDDVVFEDDFLDAIDEAVLNGNDWDILRLTTVSNGRKFAFRALSN GRSLAVALTREKGSGAYLVNRRAGKWISKLIPMRLAYDIAFDLEYLSGLKAAFIYPLCATQDADGESQIQNNLRIYRLPR WRYFTVLPYRAYLETSRFLLRGLRFLVAKAKVAMERGKPKAVQAGR
Sequences:
>Translated_206_residues MHGRRTSPPEIGCYLSHVACANKFMTGDADIALILEDDVVFEDDFLDAIDEAVLNGNDWDILRLTTVSNGRKFAFRALSN GRSLAVALTREKGSGAYLVNRRAGKWISKLIPMRLAYDIAFDLEYLSGLKAAFIYPLCATQDADGESQIQNNLRIYRLPR WRYFTVLPYRAYLETSRFLLRGLRFLVAKAKVAMERGKPKAVQAGR >Mature_206_residues MHGRRTSPPEIGCYLSHVACANKFMTGDADIALILEDDVVFEDDFLDAIDEAVLNGNDWDILRLTTVSNGRKFAFRALSN GRSLAVALTREKGSGAYLVNRRAGKWISKLIPMRLAYDIAFDLEYLSGLKAAFIYPLCATQDADGESQIQNNLRIYRLPR WRYFTVLPYRAYLETSRFLLRGLRFLVAKAKVAMERGKPKAVQAGR
Specific function: Unknown
COG id: COG3306
COG function: function code M; Glycosyltransferase involved in LPS biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23258; Mature: 23258
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGRRTSPPEIGCYLSHVACANKFMTGDADIALILEDDVVFEDDFLDAIDEAVLNGNDWD CCCCCCCCCCHHHHHHHHHHHHHEECCCCCEEEEEECCEEECHHHHHHHHHHHHCCCCCE ILRLTTVSNGRKFAFRALSNGRSLAVALTREKGSGAYLVNRRAGKWISKLIPMRLAYDIA EEEEEEECCCCEEEEEECCCCCEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHH FDLEYLSGLKAAFIYPLCATQDADGESQIQNNLRIYRLPRWRYFTVLPYRAYLETSRFLL HHHHHHCCCHHHHEEEECCCCCCCCHHHHHCCCEEEEECCEEEEEEECHHHHHHHHHHHH RGLRFLVAKAKVAMERGKPKAVQAGR HHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MHGRRTSPPEIGCYLSHVACANKFMTGDADIALILEDDVVFEDDFLDAIDEAVLNGNDWD CCCCCCCCCCHHHHHHHHHHHHHEECCCCCEEEEEECCEEECHHHHHHHHHHHHCCCCCE ILRLTTVSNGRKFAFRALSNGRSLAVALTREKGSGAYLVNRRAGKWISKLIPMRLAYDIA EEEEEEECCCCEEEEEECCCCCEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHH FDLEYLSGLKAAFIYPLCATQDADGESQIQNNLRIYRLPRWRYFTVLPYRAYLETSRFLL HHHHHHCCCHHHHEEEECCCCCCCCHHHHHCCCEEEEECCEEEEEEECHHHHHHHHHHHH RGLRFLVAKAKVAMERGKPKAVQAGR HHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA