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The map label for this gene is ytfH [H]

Identifier: 159185009

GI number: 159185009

Start: 1962333

End: 1962716

Strand: Direct

Name: ytfH [H]

Synonym: Atu2000

Alternate gene names: 159185009

Gene position: 1962333-1962716 (Clockwise)

Preceding gene: 159185007

Following gene: 15889291

Centisome position: 69.06

GC content: 56.77

Gene sequence:

>384_bases
ATGCCGGATATACAGACCAAGGAAATCTTCACTTTCGAGCAGCCCTGCCCCATCCGCGACGTGCTGGACCGCATCGGCGA
TCAATGGAGCCTGCTGGTTCTCGAAGCCCTTCAGGGCGGAGTTCTGCGCTTCAACGAGCTGAACCGCAGGATCGACGATA
TTTCCAAGCAGATGCTGTCGCGCACGCTGAAACGGCTGGAAGAGGACGGCTTCATTCGTCGCACGCTTTATGCCGAGGTG
CCGCCTCGCGTGGAATATGAGCTGACCAATCTCGGTCGTTCTTTTCTGGTGCCGATGCAATTGCTGGTGCAATGGGCCGA
TGAGAACCATGTCCGCATCTGCAAGGCGCGCGTGAAATATTCGGAAAACGACAATCGCGGCTGA

Upstream 100 bases:

>100_bases
CTATGGTATCGCGAGGCTGGCCGCAAGAAGTCAGCCGCCGGTGATCTGGTCACATGGCGATGACCTTGAAGGCGCTAAAA
TCGGGCAAGGGGTAAGGACA

Downstream 100 bases:

>100_bases
GGCACGTCTCCAGCCGCCCGCAACGCATCCATCCGAATTTCGTTCCGCCGCTTCGTTTCCTTTTTGTACTCATTTTTTCA
CCGCCTCCCCTTTTCTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MPDIQTKEIFTFEQPCPIRDVLDRIGDQWSLLVLEALQGGVLRFNELNRRIDDISKQMLSRTLKRLEEDGFIRRTLYAEV
PPRVEYELTNLGRSFLVPMQLLVQWADENHVRICKARVKYSENDNRG

Sequences:

>Translated_127_residues
MPDIQTKEIFTFEQPCPIRDVLDRIGDQWSLLVLEALQGGVLRFNELNRRIDDISKQMLSRTLKRLEEDGFIRRTLYAEV
PPRVEYELTNLGRSFLVPMQLLVQWADENHVRICKARVKYSENDNRG
>Mature_126_residues
PDIQTKEIFTFEQPCPIRDVLDRIGDQWSLLVLEALQGGVLRFNELNRRIDDISKQMLSRTLKRLEEDGFIRRTLYAEVP
PRVEYELTNLGRSFLVPMQLLVQWADENHVRICKARVKYSENDNRG

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=113, Percent_Identity=39.8230088495575, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14976; Mature: 14845

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDIQTKEIFTFEQPCPIRDVLDRIGDQWSLLVLEALQGGVLRFNELNRRIDDISKQMLS
CCCCCCCCEEECCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RTLKRLEEDGFIRRTLYAEVPPRVEYELTNLGRSFLVPMQLLVQWADENHVRICKARVKY
HHHHHHHHCCHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCEEHHHHHHHC
SENDNRG
CCCCCCC
>Mature Secondary Structure 
PDIQTKEIFTFEQPCPIRDVLDRIGDQWSLLVLEALQGGVLRFNELNRRIDDISKQMLS
CCCCCCCEEECCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RTLKRLEEDGFIRRTLYAEVPPRVEYELTNLGRSFLVPMQLLVQWADENHVRICKARVKY
HHHHHHHHCCHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCEEHHHHHHHC
SENDNRG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]