Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184869
Identifier: 159184869
GI number: 159184869
Start: 1661357
End: 1662040
Strand: Reverse
Name: 159184869
Synonym: Atu1674
Alternate gene names: NA
Gene position: 1662040-1661357 (Counterclockwise)
Preceding gene: 159184870
Following gene: 159184864
Centisome position: 58.49
GC content: 56.73
Gene sequence:
>684_bases GTGAACCGTTGCTGCGGGAACGGGGAGCGCCGGGATAAGCTGTTTCAAACGGAATTTTACCGCGATTATACTACTCTAAT AGAGGAATATCTCTTGATGTACTTTAAACCTTTTACAATCCGCGCTGCCGTCGCGTCACTTTTAATAATTTTCGGTGCGG TGGTCGATACGTCATCACAAGCAATGGCTGGTCACGGTTCTTCGCATGGGATCGAGACACGCGGTGGCGGCGGACGTAGC GGCGGCGGTGGTGGTTCCGGTAGCTCCGCCGCAACAGGCGCCCTTATAGGCCTGGGTATGGGCCTGCTTCTTCAAGGGTT GGCCAATGCTCCATCTGGGCGCCCTGAGGCGTCGGCAGGAGAAGAAAAGTCCGGCGATCAACTCAATCGAGAATCCCGCG AGCGCTGGCGTCGGGCGATGGAGGCGAAAAAAAAGCGGGCTGAGAATGCTTCCGCCGACGCCAGCAGTTGCGTCACGTTC GACCGGCGCAGCAACTCGCTCGCCGACTTCATCGTCAACAGTTGCAATGTCCCGATTGTCGTCAGATGGCGCGATAGCGG AAATTGCCGTACCCGTTGCATGAGCGGTGCGCCCGCTGGGGAGCGCTCGACTATAACGAAAATAAAGGGTTCGGTTTCGT ATACAGCGTGCCAGGGCGCCTATTGCTCACCTAGGAAATTCTGA
Upstream 100 bases:
>100_bases AACGGTACGAATTTTAGTCGCTACTCCAATTGGGTGAGTGGTGCATAGCGGCGTCAATGTATGAATACGCGAACAAAACC AGAGGAGATTGAAGGGAATT
Downstream 100 bases:
>100_bases TTGAGCCATTGCCTGACATGCGCCGGCGCGAAGAATTCGCGCGCCGGCGCATTCGGACTCCGCTGAAATTGTCCTCAGTA TGGGGATAGTTGGGGTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MNRCCGNGERRDKLFQTEFYRDYTTLIEEYLLMYFKPFTIRAAVASLLIIFGAVVDTSSQAMAGHGSSHGIETRGGGGRS GGGGGSGSSAATGALIGLGMGLLLQGLANAPSGRPEASAGEEKSGDQLNRESRERWRRAMEAKKKRAENASADASSCVTF DRRSNSLADFIVNSCNVPIVVRWRDSGNCRTRCMSGAPAGERSTITKIKGSVSYTACQGAYCSPRKF
Sequences:
>Translated_227_residues MNRCCGNGERRDKLFQTEFYRDYTTLIEEYLLMYFKPFTIRAAVASLLIIFGAVVDTSSQAMAGHGSSHGIETRGGGGRS GGGGGSGSSAATGALIGLGMGLLLQGLANAPSGRPEASAGEEKSGDQLNRESRERWRRAMEAKKKRAENASADASSCVTF DRRSNSLADFIVNSCNVPIVVRWRDSGNCRTRCMSGAPAGERSTITKIKGSVSYTACQGAYCSPRKF >Mature_227_residues MNRCCGNGERRDKLFQTEFYRDYTTLIEEYLLMYFKPFTIRAAVASLLIIFGAVVDTSSQAMAGHGSSHGIETRGGGGRS GGGGGSGSSAATGALIGLGMGLLLQGLANAPSGRPEASAGEEKSGDQLNRESRERWRRAMEAKKKRAENASADASSCVTF DRRSNSLADFIVNSCNVPIVVRWRDSGNCRTRCMSGAPAGERSTITKIKGSVSYTACQGAYCSPRKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24232; Mature: 24232
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRCCGNGERRDKLFQTEFYRDYTTLIEEYLLMYFKPFTIRAAVASLLIIFGAVVDTSSQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCH AMAGHGSSHGIETRGGGGRSGGGGGSGSSAATGALIGLGMGLLLQGLANAPSGRPEASAG HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC EEKSGDQLNRESRERWRRAMEAKKKRAENASADASSCVTFDRRSNSLADFIVNSCNVPIV CCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCHHHHHHHHCCCCCEE VRWRDSGNCRTRCMSGAPAGERSTITKIKGSVSYTACQGAYCSPRKF EEECCCCCHHHHCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCC >Mature Secondary Structure MNRCCGNGERRDKLFQTEFYRDYTTLIEEYLLMYFKPFTIRAAVASLLIIFGAVVDTSSQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCH AMAGHGSSHGIETRGGGGRSGGGGGSGSSAATGALIGLGMGLLLQGLANAPSGRPEASAG HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC EEKSGDQLNRESRERWRRAMEAKKKRAENASADASSCVTFDRRSNSLADFIVNSCNVPIV CCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCHHHHHHHHCCCCCEE VRWRDSGNCRTRCMSGAPAGERSTITKIKGSVSYTACQGAYCSPRKF EEECCCCCHHHHCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA