Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is bluB [H]
Identifier: 159184858
GI number: 159184858
Start: 1639678
End: 1640364
Strand: Reverse
Name: bluB [H]
Synonym: Atu1654
Alternate gene names: 159184858
Gene position: 1640364-1639678 (Counterclockwise)
Preceding gene: 159184859
Following gene: 159184855
Centisome position: 57.73
GC content: 64.77
Gene sequence:
>687_bases TTGCAAGCCAATCCATTCGATCACGCGCTTTCACCCGCCCGCCCGTTTTCCGGTGCGGAACGCGAAGCGATCTACCGCGC CATCGAGACGCGGCGTGATGTGCGCGACCAGTTCCTGCCCGATCCCTTGCCGGAGGAGCTGGTGGAACGCCTGCTGAAAG CGGCGCATTCCGCGCCCTCGGTCGGTTTCATGCAGCCGTGGAACTTCACCCTCGTCACCGATGGAGGGGTGCGCCAGGCC GCATGGGTGGCCTTCAGCCGCGCCAATGAGGAGGCGGCGGCGATGTTTGAAGGCGAGAAGCAGGCGCTTTACCGCAGCCT GAAGCTTGAGGGTATCCGCAAGGCACCGCTCAGCATCTGCGTCACCTGCGATCCCACCCGCGGCGGCAAGGTGGTGCTGG GCCGCACCCACAATCCGCGCACGGATGTCTACTCTACCGTCTGCGCCATCCAGAACCTCTGGCTTGCCGCCCGCGCCGAA GGCATCGGTGTCGGCTGGGTCAGCATTTTCCACGACAGCGATGTTCGCGCCATTCTTGATATCCCCGAGCATATCGAAAT CGTCGCCTGGCTGTGCCTCGGGCGCGTCGATGCGCTTTATACCGAGCCGGAGCTGGCGGTGAAGGGCTGGCGGCAGCGCG TGCCGCTCGAGGAACTGGTGTTTCGCAATCGCTGGGGTGGGCGGTAA
Upstream 100 bases:
>100_bases AGAGGCGCGTCATCGCTGCAAAACCGGCATGGTTTCTGCACCGGCGCGCCCGCATTGTTGGGGTTAAACGATGCCGACCG ATCCGTCCGCTGGCAATCCA
Downstream 100 bases:
>100_bases GGGATGAGATGCGATAGCGTCGCCTCTCGTTCCTTCTCCGCGCATGGGGAGAAGGTGGCCCGAAGGGTCGGATGAGGGGG CTAGCTCACCGAATATCGCT
Product: nitroreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MQANPFDHALSPARPFSGAEREAIYRAIETRRDVRDQFLPDPLPEELVERLLKAAHSAPSVGFMQPWNFTLVTDGGVRQA AWVAFSRANEEAAAMFEGEKQALYRSLKLEGIRKAPLSICVTCDPTRGGKVVLGRTHNPRTDVYSTVCAIQNLWLAARAE GIGVGWVSIFHDSDVRAILDIPEHIEIVAWLCLGRVDALYTEPELAVKGWRQRVPLEELVFRNRWGGR
Sequences:
>Translated_228_residues MQANPFDHALSPARPFSGAEREAIYRAIETRRDVRDQFLPDPLPEELVERLLKAAHSAPSVGFMQPWNFTLVTDGGVRQA AWVAFSRANEEAAAMFEGEKQALYRSLKLEGIRKAPLSICVTCDPTRGGKVVLGRTHNPRTDVYSTVCAIQNLWLAARAE GIGVGWVSIFHDSDVRAILDIPEHIEIVAWLCLGRVDALYTEPELAVKGWRQRVPLEELVFRNRWGGR >Mature_228_residues MQANPFDHALSPARPFSGAEREAIYRAIETRRDVRDQFLPDPLPEELVERLLKAAHSAPSVGFMQPWNFTLVTDGGVRQA AWVAFSRANEEAAAMFEGEKQALYRSLKLEGIRKAPLSICVTCDPTRGGKVVLGRTHNPRTDVYSTVCAIQNLWLAARAE GIGVGWVSIFHDSDVRAILDIPEHIEIVAWLCLGRVDALYTEPELAVKGWRQRVPLEELVFRNRWGGR
Specific function: Maybe catalyzes the reduction of Co(2+) to Co(+) in cob(II)yrinic acid A,C-diamide to allow adenosylation to procede [H]
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012825 - InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: =1.16.8.1 [H]
Molecular weight: Translated: 25574; Mature: 25574
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQANPFDHALSPARPFSGAEREAIYRAIETRRDVRDQFLPDPLPEELVERLLKAAHSAPS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC VGFMQPWNFTLVTDGGVRQAAWVAFSRANEEAAAMFEGEKQALYRSLKLEGIRKAPLSIC CCCCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEE VTCDPTRGGKVVLGRTHNPRTDVYSTVCAIQNLWLAARAEGIGVGWVSIFHDSDVRAILD EEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEECC IPEHIEIVAWLCLGRVDALYTEPELAVKGWRQRVPLEELVFRNRWGGR CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCC >Mature Secondary Structure MQANPFDHALSPARPFSGAEREAIYRAIETRRDVRDQFLPDPLPEELVERLLKAAHSAPS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC VGFMQPWNFTLVTDGGVRQAAWVAFSRANEEAAAMFEGEKQALYRSLKLEGIRKAPLSIC CCCCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEE VTCDPTRGGKVVLGRTHNPRTDVYSTVCAIQNLWLAARAEGIGVGWVSIFHDSDVRAILD EEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEECC IPEHIEIVAWLCLGRVDALYTEPELAVKGWRQRVPLEELVFRNRWGGR CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7635831; 9256491 [H]