Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 159184826
Identifier: 159184826
GI number: 159184826
Start: 1567482
End: 1567700
Strand: Direct
Name: 159184826
Synonym: Atu1584
Alternate gene names: NA
Gene position: 1567482-1567700 (Clockwise)
Preceding gene: 159184825
Following gene: 159184827
Centisome position: 55.16
GC content: 57.99
Gene sequence:
>219_bases ATGCCATCGGTCAAATCAACCGGCTTGCCTTTCCCCTCACCTCGATCACAGCGCCTGTTCGTCTCGGACTGCAGCTTGAT GCCAGCTAAGGGTTGGGAAGCCGCCTCCCCGGTGTCGTACGAGACGCAAGCGCATTGCCGGTTCACGGCGATAGGGGCGA TATTTCAAGGTCTTGACCAGGTCCGCCGCAGTTTTCCACAGCCCTTTCAGCGTCTATAA
Upstream 100 bases:
>100_bases CCACGTCGCGAATTTGTCGCGCGTCAACATTGCTGCGGAACCGATTCCCGGGCGACACGTTAGATTGTAGTCCCCCCCGA TGGAAGGCAAGCCGGACGAA
Downstream 100 bases:
>100_bases AAAAACTCGTCTCGAAGCGGAAAAAATCAATTTTTCCGCTTGCAGACCTTCGGGAGCCTGACTATAAGGGCGCCACACCA CAAGCGCACGCGCCCTTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MPSVKSTGLPFPSPRSQRLFVSDCSLMPAKGWEAASPVSYETQAHCRFTAIGAIFQGLDQVRRSFPQPFQRL
Sequences:
>Translated_72_residues MPSVKSTGLPFPSPRSQRLFVSDCSLMPAKGWEAASPVSYETQAHCRFTAIGAIFQGLDQVRRSFPQPFQRL >Mature_71_residues PSVKSTGLPFPSPRSQRLFVSDCSLMPAKGWEAASPVSYETQAHCRFTAIGAIFQGLDQVRRSFPQPFQRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8014; Mature: 7883
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVKSTGLPFPSPRSQRLFVSDCSLMPAKGWEAASPVSYETQAHCRFTAIGAIFQGLDQ CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VRRSFPQPFQRL HHHHCCCCHHCC >Mature Secondary Structure PSVKSTGLPFPSPRSQRLFVSDCSLMPAKGWEAASPVSYETQAHCRFTAIGAIFQGLDQ CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VRRSFPQPFQRL HHHHCCCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA