Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184809
Identifier: 159184809
GI number: 159184809
Start: 1541589
End: 1542017
Strand: Reverse
Name: 159184809
Synonym: Atu1551
Alternate gene names: NA
Gene position: 1542017-1541589 (Counterclockwise)
Preceding gene: 15888874
Following gene: 159184808
Centisome position: 54.27
GC content: 58.74
Gene sequence:
>429_bases ATGGTGGATGGTGCAAAAGTGAAATTGAGGCCGGTGGGCGCCAGGGCCAAAGTCGGACGGATTGGCCGGCCGATGATGTC GACGGTGACCGGCGGTGCTCTGGAGATCGTGACCGGTGTCTCGGAGCCGGGCTTCAACCCAATCGATCTTCTTTATTCGT CGCTTGCCGCGTGCCTTGCACTGAGCGCCCGGATTGCTGCAAGCCGGTTGGGGATGCTTGACCGCTTCGAAGGTGTTGCC GTCGACGTGTCAGGGGAAAAATCCGCAGACGAGCCGTATCGTATTCTCCGTTTCGATATCAGGATCGAGATTACGGGCGA TTTCGATGAAGCGACCCGCGCCGCAATAGCTCATGCGGCGGAGGATATCTGCACCGTCAGCAACACGCTGAAGGGCAATG CGGAATTTGCACTGTCGACAACCGGCTGA
Upstream 100 bases:
>100_bases TAAAGGTTCAACGGTCGTTCACCGTCGTGTGAATAAAAAGCGCCAGACGGTTTTTTGTTCCATACGGTTGGTTGCGCGCG ATTAAATTTGGATTCTGTTG
Downstream 100 bases:
>100_bases CGGTCACGGATTTCGGGATTTTTCCCACTTCTTCACCAGCCGGTCGCGCTTGAGCCTGGAGAGGCGCTTCAGCCAGAAGA TACCGTCAAGCTGGTCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: Membrane-Anchored Protein; Stress-Induced Protein
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MVDGAKVKLRPVGARAKVGRIGRPMMSTVTGGALEIVTGVSEPGFNPIDLLYSSLAACLALSARIAASRLGMLDRFEGVA VDVSGEKSADEPYRILRFDIRIEITGDFDEATRAAIAHAAEDICTVSNTLKGNAEFALSTTG
Sequences:
>Translated_142_residues MVDGAKVKLRPVGARAKVGRIGRPMMSTVTGGALEIVTGVSEPGFNPIDLLYSSLAACLALSARIAASRLGMLDRFEGVA VDVSGEKSADEPYRILRFDIRIEITGDFDEATRAAIAHAAEDICTVSNTLKGNAEFALSTTG >Mature_142_residues MVDGAKVKLRPVGARAKVGRIGRPMMSTVTGGALEIVTGVSEPGFNPIDLLYSSLAACLALSARIAASRLGMLDRFEGVA VDVSGEKSADEPYRILRFDIRIEITGDFDEATRAAIAHAAEDICTVSNTLKGNAEFALSTTG
Specific function: Unknown
COG id: COG1765
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14914; Mature: 14914
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDGAKVKLRPVGARAKVGRIGRPMMSTVTGGALEIVTGVSEPGFNPIDLLYSSLAACLA CCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH LSARIAASRLGMLDRFEGVAVDVSGEKSADEPYRILRFDIRIEITGDFDEATRAAIAHAA HHHHHHHHHHCHHHCCCCEEEEECCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHH EDICTVSNTLKGNAEFALSTTG HHHHHHHHCCCCCCEEEEEECC >Mature Secondary Structure MVDGAKVKLRPVGARAKVGRIGRPMMSTVTGGALEIVTGVSEPGFNPIDLLYSSLAACLA CCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH LSARIAASRLGMLDRFEGVAVDVSGEKSADEPYRILRFDIRIEITGDFDEATRAAIAHAA HHHHHHHHHHCHHHCCCCEEEEECCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHH EDICTVSNTLKGNAEFALSTTG HHHHHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA