Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is manA

Identifier: 159184799

GI number: 159184799

Start: 1513408

End: 1515891

Strand: Direct

Name: manA

Synonym: Atu1523

Alternate gene names: NA

Gene position: 1513408-1515891 (Clockwise)

Preceding gene: 159184797

Following gene: 159184800

Centisome position: 53.26

GC content: 59.38

Gene sequence:

>2484_bases
ATGATTTCTTCCTCCACGCCCGAAACCGTCATCGATCTGGCCGGGCTCTGGCACTTGGCCTCAGTGGAAGGAGACCATGC
CACCGAGATTTCCATTCCGGGCGATATTCACTCCGCGCTCAAAAATGCCGCCATCATTCCCGACCCCTATCACGGCGCCA
ACGAGAAGGCCGTTCAATGGGTTGCACAGCAGGACTGGATCATCGAGAGGACCTTCATCCTCGATGATGCTGAGGCGAGC
TGGTATCTCGATATCGATTATCTCGACACCGTCGCCATCGTCTTCGTCAACGACGTTCCGGTCCTAAGCGCCGACAATTG
CTTCCGCCGTTACCGGCCCGATATTTCCCGTGCCGTGCGGCCGGGTGAAAACACCATCCGAATCCATTTCCATTCCAACA
TCACGGCTGGCGCGGAGCGGCAGGCGCGGCAGCCCTTTTATATTCCCTATCACCCCGGCAATTCGCCGATCGCCAATGGC
AACATGCTGCGCAAGCCGCAATGCCATTTCGGCTGGGACTGGAACATCGCGATTGCGCCGCTTGGCCTTTACGGCAAAAT
CCTGCTGAAACGCCTCGATACCGCCCGCATCGAACACGTCGTCAGCTCGCAGCACCATGTCGAAGGCGGCGTCGAGCTGC
ATGTGGCCGTCACGCTGTTTGCCGAGGGACCGGCGAGCCTGCCGGTCTATCTGTCGCTGGGCGACGAAAGGCTGCGGCTG
GAGTGCGGCGTCGGCGCTGGCGAAACGGTGGTACGCCACGTCTTCTTCGTTGAAAATCCAGACCTCTGGTGGCCGGCCGG
CAGTGGCGAGCAGACGCTCTACAAACTCACGGTGGAACTGCCGGATGAAACCGTCACCCGCCAGATCGGCTTTCGAACCA
TCGAGCTTCTGACCGACAAGGATGAGGCTGGCAGCCGCTTCGCCTTCCGCATCAATGGCCGGGAAATCTTCTGCCGCGGC
GCCAACTGGATTCCGGCCGACGCGCTCTATTCGCTGACCAGCCGCGAAAAGACCGAAGATCTCCTCTGCTCCGCGGTCGA
GGCCAACATGAACATGATCCGCGTCTGGGGCGGCGGCTTTTATGAGGAAGACTGGTTCTACGATCTCTGCGACCGTCTTG
GCCTGCTGGTCTGGCAGGACTTCATGTTCGCCTGCAATCTTTACCCCTGCAGCGAGGATTTTCTCGACAATGTCGAGCAT
GAGGTCGACTATCAGGTGAAACGCCTCTCCTCGCATCCCTCCATCGCGCTCTGGTGCGGCGATAACGAACTGGTGGGTGC
GCTGACCTGGTTCGACGAATCCCGCAACAATCGCGACCGCTATCTTGTTGCTTACGACCGGTTGAACCGCACCATCGAAA
AAGCACTGAAAAAAGCCACTCCCGAAGCGCTCTGGTGGCCATCGAGCCCAGCCTCTGGTTATCTGGATTATGGCGATGCC
TGGCACGCGGATGGTTCCGGCGACATGCATTACTGGTCCGTCTGGCACGAGAACAAGTCGTTCGACAATTACCATCAGGT
GAAACCGCGTTTCTGCTCCGAATTCGGTTTCCAGTCCTATACGTCGATGCCCGTCATCCGCACCTATGCGGAGGACAAGG
ACATGAACATCGCCTCCCCGGTCATCGAGCTGCACCAGAAGAATGTCGGCGGCAATGAACGCATTGCCGGCACCATGTTC
CGCTATTTCCGCTTCCCCAGGGATTTCGAAAACTTCGTTTACCTCAGCCAGGTGCAGCAGGCGCTGGCGATCCGCACCGC
CGTCGATTACTGGCGGTCGCTGAAACCCCATTGCATGGGCACGCTTTACTGGCAGCTGAACGACACCTGGCCGGTCGCCT
CATGGTCGAGCCTCGATTATGGCGGCGGCTGGAAGGCACTGCACTATGCCGCCCGCCGTTTCTTCCAGCCGGTCGCGGTG
TCGGCCATCCCTTCGGCAGATGGACGCCGGGTGACTTTCTCCATGGTCAACGACACGGCGGAGGATGTCGAGATCGACAT
GAACATCGTCGCACTCGCCATGGACGGCAACCGTGTGCCGCTGAAATCCGCCAATGGGACTTGCACGAGCGACAAGGCTG
CGACGCTGACCGATATCGACATGGACAGCCTGCCTGATGGCGCGATCCTCGCGTGGAACTTTATCGCCTCCAATGGCATG
ACCGGCGAAGGTCATCATGTGCGCGACACCTACAAGGCGCTGGAGCTTCAGCCCGCCGGCCTGGAATTTTCCGTTGGCCC
GCTGAAAAACGGCCAATTCGAAATCGATGTCACCGCCGCCGGTCTCGCGCTCTTCATCATGCTGGAGGCAGATCAGCCCG
GACGGTACTCCGACAACCTTTTCGACCTTGCAGCGGGCGAAACGCGTCGCATCATCTTCACCCCGAAGGGGGCAGGCCCC
CAGCCGCATTTCCGTATCTTCGATCTTCATACCTGCCAATCCTCGCCCAATCCCGGCATTGAAACCATGCGGAGAAAGGC
ATAA

Upstream 100 bases:

>100_bases
GCGGCCGCTTTGCGCCCATCCATTCTCCCCATATTCTGACACAAGCCTGCATCATAATGCCGGCCATCTCCGTTGAATTC
ATATTATGCAGGGTCCGATC

Downstream 100 bases:

>100_bases
CCATCCCTCTTGGGAATGACAGGGGCGCCCGCGCCTGTTTTCATCGATTCAAAGGGTTGCCGGGTTCTCCGGCAGCCAGT
CATCAGCAAGTGGAGGAAGA

Product: beta-mannosidase precursor

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; Beta-Mannosidase Protein; Glycoside Hydrolase; Mannosidase; Coagulation Factor 5/8 Type Domain Protein; Glycosyl Hydrolase; Glycoside Hydrolase Family 2 Protein; Glycosidase; O-Glycosyl Hydrolase; Glycoside Hydrolase Family 2 TIM Barrel; Beta-Galactosidase/Beta-Glucuronidase; Beta-Glucuronidase; Exported Glycosyl Hydrolase; Beta-Galactosidase/Beta- Glucuronidase Family Protein; Beta-Galactosidase; Beta-D-Mannosidase; Beta-Mannosidase Man2A; Exo-Beta-D-Glucosaminidase; DS Domain/Family 2 Glycosyl Hydrolase; Beta-Galactosidase/Beta; Exported Beta-Mannosidase-Like Glycosidase; Mannosylglycoprotein Endo-Beta-Mannosidase; Beta-Mannosidase-Related Protein; BETA-Mannosidase Protein

Number of amino acids: Translated: 827; Mature: 827

Protein sequence:

>827_residues
MISSSTPETVIDLAGLWHLASVEGDHATEISIPGDIHSALKNAAIIPDPYHGANEKAVQWVAQQDWIIERTFILDDAEAS
WYLDIDYLDTVAIVFVNDVPVLSADNCFRRYRPDISRAVRPGENTIRIHFHSNITAGAERQARQPFYIPYHPGNSPIANG
NMLRKPQCHFGWDWNIAIAPLGLYGKILLKRLDTARIEHVVSSQHHVEGGVELHVAVTLFAEGPASLPVYLSLGDERLRL
ECGVGAGETVVRHVFFVENPDLWWPAGSGEQTLYKLTVELPDETVTRQIGFRTIELLTDKDEAGSRFAFRINGREIFCRG
ANWIPADALYSLTSREKTEDLLCSAVEANMNMIRVWGGGFYEEDWFYDLCDRLGLLVWQDFMFACNLYPCSEDFLDNVEH
EVDYQVKRLSSHPSIALWCGDNELVGALTWFDESRNNRDRYLVAYDRLNRTIEKALKKATPEALWWPSSPASGYLDYGDA
WHADGSGDMHYWSVWHENKSFDNYHQVKPRFCSEFGFQSYTSMPVIRTYAEDKDMNIASPVIELHQKNVGGNERIAGTMF
RYFRFPRDFENFVYLSQVQQALAIRTAVDYWRSLKPHCMGTLYWQLNDTWPVASWSSLDYGGGWKALHYAARRFFQPVAV
SAIPSADGRRVTFSMVNDTAEDVEIDMNIVALAMDGNRVPLKSANGTCTSDKAATLTDIDMDSLPDGAILAWNFIASNGM
TGEGHHVRDTYKALELQPAGLEFSVGPLKNGQFEIDVTAAGLALFIMLEADQPGRYSDNLFDLAAGETRRIIFTPKGAGP
QPHFRIFDLHTCQSSPNPGIETMRRKA

Sequences:

>Translated_827_residues
MISSSTPETVIDLAGLWHLASVEGDHATEISIPGDIHSALKNAAIIPDPYHGANEKAVQWVAQQDWIIERTFILDDAEAS
WYLDIDYLDTVAIVFVNDVPVLSADNCFRRYRPDISRAVRPGENTIRIHFHSNITAGAERQARQPFYIPYHPGNSPIANG
NMLRKPQCHFGWDWNIAIAPLGLYGKILLKRLDTARIEHVVSSQHHVEGGVELHVAVTLFAEGPASLPVYLSLGDERLRL
ECGVGAGETVVRHVFFVENPDLWWPAGSGEQTLYKLTVELPDETVTRQIGFRTIELLTDKDEAGSRFAFRINGREIFCRG
ANWIPADALYSLTSREKTEDLLCSAVEANMNMIRVWGGGFYEEDWFYDLCDRLGLLVWQDFMFACNLYPCSEDFLDNVEH
EVDYQVKRLSSHPSIALWCGDNELVGALTWFDESRNNRDRYLVAYDRLNRTIEKALKKATPEALWWPSSPASGYLDYGDA
WHADGSGDMHYWSVWHENKSFDNYHQVKPRFCSEFGFQSYTSMPVIRTYAEDKDMNIASPVIELHQKNVGGNERIAGTMF
RYFRFPRDFENFVYLSQVQQALAIRTAVDYWRSLKPHCMGTLYWQLNDTWPVASWSSLDYGGGWKALHYAARRFFQPVAV
SAIPSADGRRVTFSMVNDTAEDVEIDMNIVALAMDGNRVPLKSANGTCTSDKAATLTDIDMDSLPDGAILAWNFIASNGM
TGEGHHVRDTYKALELQPAGLEFSVGPLKNGQFEIDVTAAGLALFIMLEADQPGRYSDNLFDLAAGETRRIIFTPKGAGP
QPHFRIFDLHTCQSSPNPGIETMRRKA
>Mature_827_residues
MISSSTPETVIDLAGLWHLASVEGDHATEISIPGDIHSALKNAAIIPDPYHGANEKAVQWVAQQDWIIERTFILDDAEAS
WYLDIDYLDTVAIVFVNDVPVLSADNCFRRYRPDISRAVRPGENTIRIHFHSNITAGAERQARQPFYIPYHPGNSPIANG
NMLRKPQCHFGWDWNIAIAPLGLYGKILLKRLDTARIEHVVSSQHHVEGGVELHVAVTLFAEGPASLPVYLSLGDERLRL
ECGVGAGETVVRHVFFVENPDLWWPAGSGEQTLYKLTVELPDETVTRQIGFRTIELLTDKDEAGSRFAFRINGREIFCRG
ANWIPADALYSLTSREKTEDLLCSAVEANMNMIRVWGGGFYEEDWFYDLCDRLGLLVWQDFMFACNLYPCSEDFLDNVEH
EVDYQVKRLSSHPSIALWCGDNELVGALTWFDESRNNRDRYLVAYDRLNRTIEKALKKATPEALWWPSSPASGYLDYGDA
WHADGSGDMHYWSVWHENKSFDNYHQVKPRFCSEFGFQSYTSMPVIRTYAEDKDMNIASPVIELHQKNVGGNERIAGTMF
RYFRFPRDFENFVYLSQVQQALAIRTAVDYWRSLKPHCMGTLYWQLNDTWPVASWSSLDYGGGWKALHYAARRFFQPVAV
SAIPSADGRRVTFSMVNDTAEDVEIDMNIVALAMDGNRVPLKSANGTCTSDKAATLTDIDMDSLPDGAILAWNFIASNGM
TGEGHHVRDTYKALELQPAGLEFSVGPLKNGQFEIDVTAAGLALFIMLEADQPGRYSDNLFDLAAGETRRIIFTPKGAGP
QPHFRIFDLHTCQSSPNPGIETMRRKA

Specific function: Unknown

COG id: COG3250

COG function: function code G; Beta-galactosidase/beta-glucuronidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI84798622, Length=853, Percent_Identity=29.7772567409144, Blast_Score=374, Evalue=1e-103,
Organism=Caenorhabditis elegans, GI17550784, Length=712, Percent_Identity=30.1966292134831, Blast_Score=327, Evalue=1e-89,
Organism=Drosophila melanogaster, GI24643838, Length=844, Percent_Identity=29.9763033175355, Blast_Score=302, Evalue=7e-82,
Organism=Drosophila melanogaster, GI24643840, Length=742, Percent_Identity=31.1320754716981, Blast_Score=293, Evalue=3e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.25

Molecular weight: Translated: 93247; Mature: 93247

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISSSTPETVIDLAGLWHLASVEGDHATEISIPGDIHSALKNAAIIPDPYHGANEKAVQW
CCCCCCCHHHHHHHHHHEEEECCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCHHHHHH
VAQQDWIIERTFILDDAEASWYLDIDYLDTVAIVFVNDVPVLSADNCFRRYRPDISRAVR
HHHCCEEEEEEEEEECCCCEEEEEEEHHCEEEEEEEECCCEECCCHHHHHHCCCHHHHCC
PGENTIRIHFHSNITAGAERQARQPFYIPYHPGNSPIANGNMLRKPQCHFGWDWNIAIAP
CCCCEEEEEEECCCCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
LGLYGKILLKRLDTARIEHVVSSQHHVEGGVELHVAVTLFAEGPASLPVYLSLGDERLRL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEECCCEEEE
ECGVGAGETVVRHVFFVENPDLWWPAGSGEQTLYKLTVELPDETVTRQIGFRTIELLTDK
EECCCCCHHHEEEEEEEECCCEECCCCCCCCEEEEEEEECCCHHHHHHCCCEEEEEEECC
DEAGSRFAFRINGREIFCRGANWIPADALYSLTSREKTEDLLCSAVEANMNMIRVWGGGF
CCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCC
YEEDWFYDLCDRLGLLVWQDFMFACNLYPCSEDFLDNVEHEVDYQVKRLSSHPSIALWCG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCEEEEEC
DNELVGALTWFDESRNNRDRYLVAYDRLNRTIEKALKKATPEALWWPSSPASGYLDYGDA
CCCEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCC
WHADGSGDMHYWSVWHENKSFDNYHQVKPRFCSEFGFQSYTSMPVIRTYAEDKDMNIASP
CCCCCCCCEEEEEEEECCCCCCCHHHCCHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHH
VIELHQKNVGGNERIAGTMFRYFRFPRDFENFVYLSQVQQALAIRTAVDYWRSLKPHCMG
HHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
TLYWQLNDTWPVASWSSLDYGGGWKALHYAARRFFQPVAVSAIPSADGRRVTFSMVNDTA
EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCC
EDVEIDMNIVALAMDGNRVPLKSANGTCTSDKAATLTDIDMDSLPDGAILAWNFIASNGM
CCEEEEEEEEEEEECCCCCEECCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCC
TGEGHHVRDTYKALELQPAGLEFSVGPLKNGQFEIDVTAAGLALFIMLEADQPGRYSDNL
CCCCCCHHHHHHHHEECCCCCEEECCCCCCCEEEEEEEECCEEEEEEEECCCCCCCCCCE
FDLAAGETRRIIFTPKGAGPQPHFRIFDLHTCQSSPNPGIETMRRKA
EEECCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHHHHCC
>Mature Secondary Structure
MISSSTPETVIDLAGLWHLASVEGDHATEISIPGDIHSALKNAAIIPDPYHGANEKAVQW
CCCCCCCHHHHHHHHHHEEEECCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCHHHHHH
VAQQDWIIERTFILDDAEASWYLDIDYLDTVAIVFVNDVPVLSADNCFRRYRPDISRAVR
HHHCCEEEEEEEEEECCCCEEEEEEEHHCEEEEEEEECCCEECCCHHHHHHCCCHHHHCC
PGENTIRIHFHSNITAGAERQARQPFYIPYHPGNSPIANGNMLRKPQCHFGWDWNIAIAP
CCCCEEEEEEECCCCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
LGLYGKILLKRLDTARIEHVVSSQHHVEGGVELHVAVTLFAEGPASLPVYLSLGDERLRL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEECCCEEEE
ECGVGAGETVVRHVFFVENPDLWWPAGSGEQTLYKLTVELPDETVTRQIGFRTIELLTDK
EECCCCCHHHEEEEEEEECCCEECCCCCCCCEEEEEEEECCCHHHHHHCCCEEEEEEECC
DEAGSRFAFRINGREIFCRGANWIPADALYSLTSREKTEDLLCSAVEANMNMIRVWGGGF
CCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCC
YEEDWFYDLCDRLGLLVWQDFMFACNLYPCSEDFLDNVEHEVDYQVKRLSSHPSIALWCG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCEEEEEC
DNELVGALTWFDESRNNRDRYLVAYDRLNRTIEKALKKATPEALWWPSSPASGYLDYGDA
CCCEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCC
WHADGSGDMHYWSVWHENKSFDNYHQVKPRFCSEFGFQSYTSMPVIRTYAEDKDMNIASP
CCCCCCCCEEEEEEEECCCCCCCHHHCCHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHH
VIELHQKNVGGNERIAGTMFRYFRFPRDFENFVYLSQVQQALAIRTAVDYWRSLKPHCMG
HHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
TLYWQLNDTWPVASWSSLDYGGGWKALHYAARRFFQPVAVSAIPSADGRRVTFSMVNDTA
EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCC
EDVEIDMNIVALAMDGNRVPLKSANGTCTSDKAATLTDIDMDSLPDGAILAWNFIASNGM
CCEEEEEEEEEEEECCCCCEECCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCC
TGEGHHVRDTYKALELQPAGLEFSVGPLKNGQFEIDVTAAGLALFIMLEADQPGRYSDNL
CCCCCCHHHHHHHHEECCCCCEEECCCCCCCEEEEEEEECCEEEEEEEECCCCCCCCCCE
FDLAAGETRRIIFTPKGAGPQPHFRIFDLHTCQSSPNPGIETMRRKA
EEECCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA