Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is znuA [H]
Identifier: 159184797
GI number: 159184797
Start: 1510841
End: 1511830
Strand: Direct
Name: znuA [H]
Synonym: Atu1521
Alternate gene names: 159184797
Gene position: 1510841-1511830 (Clockwise)
Preceding gene: 159184795
Following gene: 159184799
Centisome position: 53.17
GC content: 60.81
Gene sequence:
>990_bases ATGAAATCGATCCTGATCCCGCTCATGGCGTCGGCGGCACTAGCAGCCGTCGCTTCGGGCGCTACCGCCGCGCCCGATGT CGTGGTCTCGATCAAGCCTGTCCACTCCCTCGTTGCAGCCATCATGAAGGGTGTGGGCGAACCGCAGCTCATCGTCGACG GCGCGGCCTCGCCGCATACTTATAATCTCCGGCCCTCCAATGCACGCAAGCTCGAAAAGGCGGATGTGGTGTTTTGGGTC GGCCCCGGACTGGAAGCCTTTCTGCAAAAGCCGCTGGAAGCGCTGGCCAGCAAGGCGACCGTGGTGGAGCTAGAAGATGC CAAGGGTCTCGAAAAACTGCCCTTCCGAAAGGGCGGCCCCTTCGAGGCGCACGATGATGGTGAAGAAGGCCATGAGGCGC ATGCGGGCCACACCGAAGACGAAGGTGCGCATGATCATGGAAACGACCATGCCGGTTCCGAGGAGCACGAGCACGGCGCG TATGACACGCATCTCTGGCTCGACCCTGCCAACGCCAAGGCAATGGCCCAGGCGATCGAAACGGCTCTGATTGCGGCCGA TGCCGGCAATGCCGCGACCTATCAGGCCAACACCAAGAAGCTGATCGATGATCTCGATGCGCTCGACGCCGAAGTCGTAG AGACGGTGAAACCGGTGAAGGACAAGCCCTTCATCGTTTTCCACGATGCTTATCAATATTTCGAGCATCGTTATGGCGTG AAAACCGCGGGATCGATCACCGTCAGCCCCGAAACCCTGCCGGGCGCGGATCGCGTCAAACAGATGCAGGAGAAGGTTCG CCAGCTGGGCGCACCCTGCGTTTTCGCCGAACCGCAATTCGAGCCGAAACTGGTCTCGGTCATCACCGAAGGCACGGCAG CGAAATCGGCGACGCTCGATCCGGAAGCGGCGACACTCACGCCCGGCCCCGATCTTTATTTCAAGCTGATGCGCGGCATT GCCGGTTCGCTCAAGAACTGCCTGTCCTGA
Upstream 100 bases:
>100_bases TTGTCCGTTCAGCGATGTTGCCTACCGCTATTGCATACGTTATAGAGTTACGCAATAAATGTAATAACATAACTATACTT GTTCAAGTGGAGTGCATTTC
Downstream 100 bases:
>100_bases TCGGAAACAGCGCCGGATTTCCTATGGCTTGGGCGCCATCGACGACCAGACCGGCCCGCTGATGCTCTGCAGCGTTTCAG CAGCTTCACCATTGATGCGG
Product: ABC transporter, substrate binding protein (zinc)
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKSILIPLMASAALAAVASGATAAPDVVVSIKPVHSLVAAIMKGVGEPQLIVDGAASPHTYNLRPSNARKLEKADVVFWV GPGLEAFLQKPLEALASKATVVELEDAKGLEKLPFRKGGPFEAHDDGEEGHEAHAGHTEDEGAHDHGNDHAGSEEHEHGA YDTHLWLDPANAKAMAQAIETALIAADAGNAATYQANTKKLIDDLDALDAEVVETVKPVKDKPFIVFHDAYQYFEHRYGV KTAGSITVSPETLPGADRVKQMQEKVRQLGAPCVFAEPQFEPKLVSVITEGTAAKSATLDPEAATLTPGPDLYFKLMRGI AGSLKNCLS
Sequences:
>Translated_329_residues MKSILIPLMASAALAAVASGATAAPDVVVSIKPVHSLVAAIMKGVGEPQLIVDGAASPHTYNLRPSNARKLEKADVVFWV GPGLEAFLQKPLEALASKATVVELEDAKGLEKLPFRKGGPFEAHDDGEEGHEAHAGHTEDEGAHDHGNDHAGSEEHEHGA YDTHLWLDPANAKAMAQAIETALIAADAGNAATYQANTKKLIDDLDALDAEVVETVKPVKDKPFIVFHDAYQYFEHRYGV KTAGSITVSPETLPGADRVKQMQEKVRQLGAPCVFAEPQFEPKLVSVITEGTAAKSATLDPEAATLTPGPDLYFKLMRGI AGSLKNCLS >Mature_329_residues MKSILIPLMASAALAAVASGATAAPDVVVSIKPVHSLVAAIMKGVGEPQLIVDGAASPHTYNLRPSNARKLEKADVVFWV GPGLEAFLQKPLEALASKATVVELEDAKGLEKLPFRKGGPFEAHDDGEEGHEAHAGHTEDEGAHDHGNDHAGSEEHEHGA YDTHLWLDPANAKAMAQAIETALIAADAGNAATYQANTKKLIDDLDALDAEVVETVKPVKDKPFIVFHDAYQYFEHRYGV KTAGSITVSPETLPGADRVKQMQEKVRQLGAPCVFAEPQFEPKLVSVITEGTAAKSATLDPEAATLTPGPDLYFKLMRGI AGSLKNCLS
Specific function: Involved in the high-affinity zinc uptake transport system. Required for survival and normal growth under low Zn (2+) concentrations. Also required for virulence and intracellular growth in macrophages [H]
COG id: COG4531
COG function: function code P; ABC-type Zn2+ transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
Organism=Escherichia coli, GI87081990, Length=313, Percent_Identity=37.0607028753994, Blast_Score=196, Evalue=2e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 [H]
Pfam domain/function: PF01297 SBP_bac_9 [H]
EC number: NA
Molecular weight: Translated: 34919; Mature: 34919
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSILIPLMASAALAAVASGATAAPDVVVSIKPVHSLVAAIMKGVGEPQLIVDGAASPHT CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHCCCCCEEEEECCCCCCE YNLRPSNARKLEKADVVFWVGPGLEAFLQKPLEALASKATVVELEDAKGLEKLPFRKGGP ECCCCCCCCHHHHCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHCCCCCCCC FEAHDDGEEGHEAHAGHTEDEGAHDHGNDHAGSEEHEHGAYDTHLWLDPANAKAMAQAIE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHH TALIAADAGNAATYQANTKKLIDDLDALDAEVVETVKPVKDKPFIVFHDAYQYFEHRYGV HHHHEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCC KTAGSITVSPETLPGADRVKQMQEKVRQLGAPCVFAEPQFEPKLVSVITEGTAAKSATLD CCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCCCCCCC PEAATLTPGPDLYFKLMRGIAGSLKNCLS CCCCEECCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSILIPLMASAALAAVASGATAAPDVVVSIKPVHSLVAAIMKGVGEPQLIVDGAASPHT CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHCCCCCEEEEECCCCCCE YNLRPSNARKLEKADVVFWVGPGLEAFLQKPLEALASKATVVELEDAKGLEKLPFRKGGP ECCCCCCCCHHHHCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHCCCCCCCC FEAHDDGEEGHEAHAGHTEDEGAHDHGNDHAGSEEHEHGAYDTHLWLDPANAKAMAQAIE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHH TALIAADAGNAATYQANTKKLIDDLDALDAEVVETVKPVKDKPFIVFHDAYQYFEHRYGV HHHHEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCC KTAGSITVSPETLPGADRVKQMQEKVRQLGAPCVFAEPQFEPKLVSVITEGTAAKSATLD CCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCCCCCCC PEAATLTPGPDLYFKLMRGIAGSLKNCLS CCCCEECCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA