Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is znuB [H]
Identifier: 159184796
GI number: 159184796
Start: 1509026
End: 1509844
Strand: Reverse
Name: znuB [H]
Synonym: Atu1519
Alternate gene names: 159184796
Gene position: 1509844-1509026 (Counterclockwise)
Preceding gene: 15888845
Following gene: 15888843
Centisome position: 53.13
GC content: 61.29
Gene sequence:
>819_bases ATGTTTGACGATTTCTTCGTACGCGCCATGGTCGCCGGCATTGGCGTTGCGCTCACCGCCGGTCCTCTCGGCTGTTTCGT CGTCTGGCGGCGCATGGCCTATTTCGGTGATACCATGGCCCATTCGGCGCTACTCGGCGTGGCGCTCTCGCTGCTGTTGC AGCTCAATCTCATCGTCAGCGTTTTTCTGGTGGCGTCCGCGGTTTCGATCCTGCTGATTTTCCTGCAGCGGCGGCAGGCG CTTTCCTCCGATGCGCTGCTTGGCATCCTGTCCCATTCGGCGCTGGCGATCGGCCTTGTCATTGTCGCCTTCATGAGCTG GGTGCGTATCGATCTCGTCTCGTTCCTGTTCGGCGATATTCTTGCCGTCACCCGCAGCGATATCGCGCTGATCTGGGGCG GCGGGCTGGTGGTCATCGTTTCCATGGTCTTCTTGTGGCGGTCGCTGCTCGCTTCCACCGTCAATACCGAACTGGCGGAA GCCGAGGGGCTGAACCCGGAACGCTCGAAGCTGATCTTCACATTGTTGATGGCTCTGGTGATCGCAATCGCCATGAAAGT GGTCGGCATCATGCTCATCACCTCGCTGCTCATCATACCGGCCGCGACCGCGCGGCGTTTTTCCAGCACGCCGGAGGTGA TGGCGGTTGTGGCCTCGCTGATCGGCGCTGTGGCCGTTGTCGGCGGCCTGTTCGGCTCGCTGACCTATGATACGCCGTCC GGCCCATCCATCGTGGTTGCCGCGGTGATCCTGTTCGTTATAAGCCTGTTGCCGGCGCCGGGTTTTTCCCGCTCCGCGGA TGAAGGAGGCAAGCCATGA
Upstream 100 bases:
>100_bases GACGGGCACCACCATGATGAGGATGGCGAATGCGGTTGCGGCCATGATCATGGGGAGCATGGGGACCATGCGCCCGACGG CCTTCGGCAGGGAGAACGCC
Downstream 100 bases:
>100_bases ATGCGCAGACCCAGCAGAACCTCACCAAGAACCAGTCGCTGGTGATGAATGCCCTCTCAAACGCGCATCAGCCGCTCAGC GCCTATATGATCCTCGACAA
Product: ABC transporter, membrane spanning protein (zinc)
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MFDDFFVRAMVAGIGVALTAGPLGCFVVWRRMAYFGDTMAHSALLGVALSLLLQLNLIVSVFLVASAVSILLIFLQRRQA LSSDALLGILSHSALAIGLVIVAFMSWVRIDLVSFLFGDILAVTRSDIALIWGGGLVVIVSMVFLWRSLLASTVNTELAE AEGLNPERSKLIFTLLMALVIAIAMKVVGIMLITSLLIIPAATARRFSSTPEVMAVVASLIGAVAVVGGLFGSLTYDTPS GPSIVVAAVILFVISLLPAPGFSRSADEGGKP
Sequences:
>Translated_272_residues MFDDFFVRAMVAGIGVALTAGPLGCFVVWRRMAYFGDTMAHSALLGVALSLLLQLNLIVSVFLVASAVSILLIFLQRRQA LSSDALLGILSHSALAIGLVIVAFMSWVRIDLVSFLFGDILAVTRSDIALIWGGGLVVIVSMVFLWRSLLASTVNTELAE AEGLNPERSKLIFTLLMALVIAIAMKVVGIMLITSLLIIPAATARRFSSTPEVMAVVASLIGAVAVVGGLFGSLTYDTPS GPSIVVAAVILFVISLLPAPGFSRSADEGGKP >Mature_272_residues MFDDFFVRAMVAGIGVALTAGPLGCFVVWRRMAYFGDTMAHSALLGVALSLLLQLNLIVSVFLVASAVSILLIFLQRRQA LSSDALLGILSHSALAIGLVIVAFMSWVRIDLVSFLFGDILAVTRSDIALIWGGGLVVIVSMVFLWRSLLASTVNTELAE AEGLNPERSKLIFTLLMALVIAIAMKVVGIMLITSLLIIPAATARRFSSTPEVMAVVASLIGAVAVVGGLFGSLTYDTPS GPSIVVAAVILFVISLLPAPGFSRSADEGGKP
Specific function: Involved in the high-affinity zinc uptake transport system [H]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1788166, Length=247, Percent_Identity=53.0364372469636, Blast_Score=246, Evalue=2e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 28592; Mature: 28592
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDDFFVRAMVAGIGVALTAGPLGCFVVWRRMAYFGDTMAHSALLGVALSLLLQLNLIVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFLVASAVSILLIFLQRRQALSSDALLGILSHSALAIGLVIVAFMSWVRIDLVSFLFGDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVTRSDIALIWGGGLVVIVSMVFLWRSLLASTVNTELAEAEGLNPERSKLIFTLLMALV HHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IAIAMKVVGIMLITSLLIIPAATARRFSSTPEVMAVVASLIGAVAVVGGLFGSLTYDTPS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GPSIVVAAVILFVISLLPAPGFSRSADEGGKP CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MFDDFFVRAMVAGIGVALTAGPLGCFVVWRRMAYFGDTMAHSALLGVALSLLLQLNLIVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFLVASAVSILLIFLQRRQALSSDALLGILSHSALAIGLVIVAFMSWVRIDLVSFLFGDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVTRSDIALIWGGGLVVIVSMVFLWRSLLASTVNTELAEAEGLNPERSKLIFTLLMALV HHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IAIAMKVVGIMLITSLLIIPAATARRFSSTPEVMAVVASLIGAVAVVGGLFGSLTYDTPS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GPSIVVAAVILFVISLLPAPGFSRSADEGGKP CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 2842314; 7984428; 9680209 [H]