Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 159184787
Identifier: 159184787
GI number: 159184787
Start: 1491357
End: 1491701
Strand: Direct
Name: 159184787
Synonym: Atu1501
Alternate gene names: NA
Gene position: 1491357-1491701 (Clockwise)
Preceding gene: 159185434
Following gene: 15888829
Centisome position: 52.48
GC content: 64.64
Gene sequence:
>345_bases ATGATCAAGTTTATGAAAACCACAGGCCTGGCAATCGGCCTCGCCTTCGCATCCTTCGCCGCAACGGTACCCGCAGGGGC GCAGGACATGGAGCTGAGAATCGGGCCGGATGGCGTTCGCCCTGTCATCCGCGATCGTGATCGGGACCGAGACATGGACC GCCGTGGCTCTCCTCGTATGCGCGGCTGTAGCGAACGCGAAGCGCGCGCTGCCGCCCGCGAGGCCGGACTACGCGATCCC GAAGTCGTGCGCGTCACTCCCGGTCGTGTCGTCGTCGAAGGGTTCACGCGCCGAGGCCAGGATCGCATCACATTCGCAAA CGAACGGGGCTGCCCGGAAATCTGA
Upstream 100 bases:
>100_bases CGTCTCTTCCCAGCCTATACGCAAGGAACAAATGGATGACGACGGCGTTTTCCCCCCGCAAACAAACGAGCTTCCGCCGG TTTCGGCTGAGGGAGGAAAC
Downstream 100 bases:
>100_bases TGAGATCAACCACCGCCTGGAACCCGCCGTAAGGCGGGTTTCTCGTCGTGACGATTTTTGGCCACCCCAAATCCTGACGA CACGTCGGGATCATTCCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MIKFMKTTGLAIGLAFASFAATVPAGAQDMELRIGPDGVRPVIRDRDRDRDMDRRGSPRMRGCSEREARAAAREAGLRDP EVVRVTPGRVVVEGFTRRGQDRITFANERGCPEI
Sequences:
>Translated_114_residues MIKFMKTTGLAIGLAFASFAATVPAGAQDMELRIGPDGVRPVIRDRDRDRDMDRRGSPRMRGCSEREARAAAREAGLRDP EVVRVTPGRVVVEGFTRRGQDRITFANERGCPEI >Mature_114_residues MIKFMKTTGLAIGLAFASFAATVPAGAQDMELRIGPDGVRPVIRDRDRDRDMDRRGSPRMRGCSEREARAAAREAGLRDP EVVRVTPGRVVVEGFTRRGQDRITFANERGCPEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12616; Mature: 12616
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKFMKTTGLAIGLAFASFAATVPAGAQDMELRIGPDGVRPVIRDRDRDRDMDRRGSPRM CCEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCCC RGCSEREARAAAREAGLRDPEVVRVTPGRVVVEGFTRRGQDRITFANERGCPEI CCCCHHHHHHHHHHCCCCCCCEEEECCCEEEEECHHCCCCCCEEECCCCCCCCC >Mature Secondary Structure MIKFMKTTGLAIGLAFASFAATVPAGAQDMELRIGPDGVRPVIRDRDRDRDMDRRGSPRM CCEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCCC RGCSEREARAAAREAGLRDPEVVRVTPGRVVVEGFTRRGQDRITFANERGCPEI CCCCHHHHHHHHHHCCCCCCCEEEECCCEEEEECHHCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA