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The map label for this gene is acd [H]

Identifier: 159184750

GI number: 159184750

Start: 1409176

End: 1410738

Strand: Reverse

Name: acd [H]

Synonym: Atu1414

Alternate gene names: 159184750

Gene position: 1410738-1409176 (Counterclockwise)

Preceding gene: 15888741

Following gene: 159184749

Centisome position: 49.65

GC content: 63.92

Gene sequence:

>1563_bases
ATGGAGCTTCTGAAGGCAACGTCCGGCTGGCGTCGCATCCAGTCTCTCCGTGGCGATTGCGATGATGCCCTGGTAGTGGC
CATCCTCAACGAAGCGGCGCGTTTTGCCGAAACCGTGCTTGAACCGCTCAATACACCCGCCGATCGTGAAGGCTGCACCG
TGGTCGATGGCCGCGTTCGCGTTCCCACCGGTTTTGCCGATGCTTTTCGGCGGCATGCGGGCGATGGCTGGCTGGCCATG
GATGTGCCGGAACGCTTCGGCGGTCAGGCTCTGCCGCTGGTGTTACAGGCCGCCTGCGCTCCACTTTTCGAACGGGGCTG
CGTGGCGCTGATGATGGCGTCAGGCTCGACCCGCGCCGCCTGTCACCTTCTTGCCGAGACCGCGGAAGGAGCCGTTGCGG
ACGAATGGGTGCCGCGCCTTGCGGCGGGGGAATGGGCTGCCACCATCTGCATTTCCGAGCCTGATGCCGGTTCCGACCTC
GCCCGTCTGCGCAGTCGCGCCGTCTTCAGGGAAGGCGCATGGCGCATCGAGGGTCGGAAAATCTGGATATCCTTCGGCGA
CCATGACATGGCGATGCGTATCGGCCATTGTCTTCTCGCCCGCACCGGCGAAGAAACCGGGACGCGCGGCCTCAGCCTTT
TCCTTGTGCCGGATGAGATCGATGGCGAACGCAACGGCGTCACCGTCGAGCGGATCGAGGAAAAAATGGGGCTGCACGGC
TCGCCCACCTGCGCGCTGCGTTTCGACGGTGCCCGCGGCCTCTTACTGGGTGAGGAAGGGCGCGGGCTGGCGCAGCTTTT
CGCCATGATCGAATTGATGCGGTTGCAGACCGGCTGTCAGGGGCTGGGACTGGCCTCGGCCGCCATCGATATTGCCGAAA
CCTATGCGCAGGAGCGCCAACAAGGCGGCGATCCGGCAAAACCCGCCGTCGCCATCGCACACCACCCCGATATTCGCCGC
CAGCTTCAGGAAGCCCGCCTGCGCACGGAAACATTGCGGGCAGCAACACTGGAACTCGCAACAGTCATGGATCTTGCCCG
CATGGAGCCGAAGGAAGAGCTGCGCGGCGATTTGCAGGCGCTCTCGCGCTGGCTGCTGCCGCTTGTCAAGAATTTCGGTG
CGGATGCCGGCTTCACCGTCTCCAATCAGGCCATCCAGATACTTGGCGGTGCGGGTTACACCCGGGAATGGCCGCTTGAG
CAATATCTGCGCGATGCCCGGGTGATGACGATCTATGAAGGCACCACCGGCATGCAGGCGATCGACCTTCTGACAAGGCG
GCTGTGGCGGGAAGGCGGAAAGGGTCTCGACGTTTTTCTGAAACGCGCCCGCAGCGAACTCGCTGATTACCGGTCCGACA
AAACCAAAGCGGCAGCATCCGTGCTGGATGCTTTCGAGGCCGAGAGCCGACGCATGGCGGCGCTGGAAAACGAGCCGGAA
ACCGGCCTCTGGCAGGCCAACAACTATCTGAACGCCGCCTGGGAGGCATTCGCCGCATGGATGACCGTGCGGGTCGAAGG
CGTCGCGGATGCGCAGGCACGGCGGACGGGAAAAGCGGCCTGA

Upstream 100 bases:

>100_bases
GAGAACGATTACATGAACGGTGAAGTCATCCGGCTGGATGGCGCGATCCGCATGCAGCCGCGGTGATGTGATGAGTTTTT
CAACCCAGGCGGCCCGCACG

Downstream 100 bases:

>100_bases
CGTCACGAAAAGAATGAGACGCATTTTTCAGGGCTGTCACCGACGCCCGATCATTGGGAGGGAAGACAATGAATAAACGC
ATCAACACATGGATGGCAAC

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MELLKATSGWRRIQSLRGDCDDALVVAILNEAARFAETVLEPLNTPADREGCTVVDGRVRVPTGFADAFRRHAGDGWLAM
DVPERFGGQALPLVLQAACAPLFERGCVALMMASGSTRAACHLLAETAEGAVADEWVPRLAAGEWAATICISEPDAGSDL
ARLRSRAVFREGAWRIEGRKIWISFGDHDMAMRIGHCLLARTGEETGTRGLSLFLVPDEIDGERNGVTVERIEEKMGLHG
SPTCALRFDGARGLLLGEEGRGLAQLFAMIELMRLQTGCQGLGLASAAIDIAETYAQERQQGGDPAKPAVAIAHHPDIRR
QLQEARLRTETLRAATLELATVMDLARMEPKEELRGDLQALSRWLLPLVKNFGADAGFTVSNQAIQILGGAGYTREWPLE
QYLRDARVMTIYEGTTGMQAIDLLTRRLWREGGKGLDVFLKRARSELADYRSDKTKAAASVLDAFEAESRRMAALENEPE
TGLWQANNYLNAAWEAFAAWMTVRVEGVADAQARRTGKAA

Sequences:

>Translated_520_residues
MELLKATSGWRRIQSLRGDCDDALVVAILNEAARFAETVLEPLNTPADREGCTVVDGRVRVPTGFADAFRRHAGDGWLAM
DVPERFGGQALPLVLQAACAPLFERGCVALMMASGSTRAACHLLAETAEGAVADEWVPRLAAGEWAATICISEPDAGSDL
ARLRSRAVFREGAWRIEGRKIWISFGDHDMAMRIGHCLLARTGEETGTRGLSLFLVPDEIDGERNGVTVERIEEKMGLHG
SPTCALRFDGARGLLLGEEGRGLAQLFAMIELMRLQTGCQGLGLASAAIDIAETYAQERQQGGDPAKPAVAIAHHPDIRR
QLQEARLRTETLRAATLELATVMDLARMEPKEELRGDLQALSRWLLPLVKNFGADAGFTVSNQAIQILGGAGYTREWPLE
QYLRDARVMTIYEGTTGMQAIDLLTRRLWREGGKGLDVFLKRARSELADYRSDKTKAAASVLDAFEAESRRMAALENEPE
TGLWQANNYLNAAWEAFAAWMTVRVEGVADAQARRTGKAA
>Mature_520_residues
MELLKATSGWRRIQSLRGDCDDALVVAILNEAARFAETVLEPLNTPADREGCTVVDGRVRVPTGFADAFRRHAGDGWLAM
DVPERFGGQALPLVLQAACAPLFERGCVALMMASGSTRAACHLLAETAEGAVADEWVPRLAAGEWAATICISEPDAGSDL
ARLRSRAVFREGAWRIEGRKIWISFGDHDMAMRIGHCLLARTGEETGTRGLSLFLVPDEIDGERNGVTVERIEEKMGLHG
SPTCALRFDGARGLLLGEEGRGLAQLFAMIELMRLQTGCQGLGLASAAIDIAETYAQERQQGGDPAKPAVAIAHHPDIRR
QLQEARLRTETLRAATLELATVMDLARMEPKEELRGDLQALSRWLLPLVKNFGADAGFTVSNQAIQILGGAGYTREWPLE
QYLRDARVMTIYEGTTGMQAIDLLTRRLWREGGKGLDVFLKRARSELADYRSDKTKAAASVLDAFEAESRRMAALENEPE
TGLWQANNYLNAAWEAFAAWMTVRVEGVADAQARRTGKAA

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=417, Percent_Identity=29.7362110311751, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI21361497, Length=399, Percent_Identity=25.062656641604, Blast_Score=118, Evalue=2e-26,
Organism=Homo sapiens, GI4501859, Length=288, Percent_Identity=28.125, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI226958414, Length=354, Percent_Identity=24.8587570621469, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI226958412, Length=346, Percent_Identity=24.8554913294798, Blast_Score=109, Evalue=7e-24,
Organism=Homo sapiens, GI4557231, Length=351, Percent_Identity=24.5014245014245, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI187960098, Length=351, Percent_Identity=24.5014245014245, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI7656849, Length=302, Percent_Identity=28.476821192053, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI4557235, Length=294, Percent_Identity=28.9115646258503, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI76496475, Length=294, Percent_Identity=28.9115646258503, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI4501857, Length=300, Percent_Identity=25.6666666666667, Blast_Score=87, Evalue=4e-17,
Organism=Escherichia coli, GI87082384, Length=307, Percent_Identity=28.6644951140065, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87081958, Length=363, Percent_Identity=27.2727272727273, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1786223, Length=276, Percent_Identity=24.2753623188406, Blast_Score=73, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17534899, Length=415, Percent_Identity=27.9518072289157, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17508101, Length=409, Percent_Identity=26.161369193154, Blast_Score=125, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI17570075, Length=373, Percent_Identity=25.4691689008043, Blast_Score=120, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17569725, Length=359, Percent_Identity=26.1838440111421, Blast_Score=119, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI17506239, Length=356, Percent_Identity=26.685393258427, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17533517, Length=413, Percent_Identity=24.9394673123487, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17538396, Length=371, Percent_Identity=25.6064690026954, Blast_Score=102, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI86563381, Length=337, Percent_Identity=27.0029673590504, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI86563383, Length=337, Percent_Identity=27.0029673590504, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71990804, Length=259, Percent_Identity=25.4826254826255, Blast_Score=82, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI32563615, Length=172, Percent_Identity=30.8139534883721, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71985184, Length=287, Percent_Identity=26.8292682926829, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17505929, Length=354, Percent_Identity=26.5536723163842, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17551932, Length=368, Percent_Identity=26.9021739130435, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI21356377, Length=349, Percent_Identity=29.2263610315186, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24666513, Length=288, Percent_Identity=29.8611111111111, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24660351, Length=367, Percent_Identity=26.7029972752044, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24646207, Length=411, Percent_Identity=27.2506082725061, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI21355753, Length=348, Percent_Identity=26.1494252873563, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI281363737, Length=352, Percent_Identity=25.8522727272727, Blast_Score=92, Evalue=8e-19,
Organism=Drosophila melanogaster, GI19920834, Length=322, Percent_Identity=23.9130434782609, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 56830; Mature: 56830

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLKATSGWRRIQSLRGDCDDALVVAILNEAARFAETVLEPLNTPADREGCTVVDGRVR
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEE
VPTGFADAFRRHAGDGWLAMDVPERFGGQALPLVLQAACAPLFERGCVALMMASGSTRAA
CCCCHHHHHHHHCCCCEEEECCHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHH
CHLLAETAEGAVADEWVPRLAAGEWAATICISEPDAGSDLARLRSRAVFREGAWRIEGRK
HHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECEE
IWISFGDHDMAMRIGHCLLARTGEETGTRGLSLFLVPDEIDGERNGVTVERIEEKMGLHG
EEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCC
SPTCALRFDGARGLLLGEEGRGLAQLFAMIELMRLQTGCQGLGLASAAIDIAETYAQERQ
CCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
QGGDPAKPAVAIAHHPDIRRQLQEARLRTETLRAATLELATVMDLARMEPKEELRGDLQA
CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LSRWLLPLVKNFGADAGFTVSNQAIQILGGAGYTREWPLEQYLRDARVMTIYEGTTGMQA
HHHHHHHHHHHCCCCCCCEECCCEEEEEECCCCCCCCCHHHHHCCCEEEEEEECCCCHHH
IDLLTRRLWREGGKGLDVFLKRARSELADYRSDKTKAAASVLDAFEAESRRMAALENEPE
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TGLWQANNYLNAAWEAFAAWMTVRVEGVADAQARRTGKAA
CCCEECCCHHHHHHHHHHHHHHEEECCCCCHHHHHCCCCC
>Mature Secondary Structure
MELLKATSGWRRIQSLRGDCDDALVVAILNEAARFAETVLEPLNTPADREGCTVVDGRVR
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEE
VPTGFADAFRRHAGDGWLAMDVPERFGGQALPLVLQAACAPLFERGCVALMMASGSTRAA
CCCCHHHHHHHHCCCCEEEECCHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHH
CHLLAETAEGAVADEWVPRLAAGEWAATICISEPDAGSDLARLRSRAVFREGAWRIEGRK
HHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECEE
IWISFGDHDMAMRIGHCLLARTGEETGTRGLSLFLVPDEIDGERNGVTVERIEEKMGLHG
EEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCC
SPTCALRFDGARGLLLGEEGRGLAQLFAMIELMRLQTGCQGLGLASAAIDIAETYAQERQ
CCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
QGGDPAKPAVAIAHHPDIRRQLQEARLRTETLRAATLELATVMDLARMEPKEELRGDLQA
CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LSRWLLPLVKNFGADAGFTVSNQAIQILGGAGYTREWPLEQYLRDARVMTIYEGTTGMQA
HHHHHHHHHHHCCCCCCCEECCCEEEEEECCCCCCCCCHHHHHCCCEEEEEEECCCCHHH
IDLLTRRLWREGGKGLDVFLKRARSELADYRSDKTKAAASVLDAFEAESRRMAALENEPE
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TGLWQANNYLNAAWEAFAAWMTVRVEGVADAQARRTGKAA
CCCEECCCHHHHHHHHHHHHHHEEECCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]