Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is folB [H]
Identifier: 159184726
GI number: 159184726
Start: 1347605
End: 1347970
Strand: Direct
Name: folB [H]
Synonym: Atu1353
Alternate gene names: 159184726
Gene position: 1347605-1347970 (Clockwise)
Preceding gene: 159184725
Following gene: 159184727
Centisome position: 47.42
GC content: 57.65
Gene sequence:
>366_bases ATGAGCCGCTATACCATCATCCTGAAAAACTGTTCCTTTTTCGCCCGTCATGGCCTTCTCGAGCAGGAGGAGGTGCTGGG CCAGCGCTTTTTCGTCGATGCCGAGATGGAAGTCGAGGCGGGTGATGCGCTGGAAACCGACGATATCGAAAATACCGTCG ACTACGGCGTGGCCTTTGCCGTCATCGAAAAAAGCGTCGTCGGGCAGCGTCGTTATCTCATCGAGGCGCTGGCGAACGAC ATCGCCAAGGCGCTTCGGGCGCGTTATCCGCAGATCGTCTGGCTGAAGATCACGGTGCGTAAACCCTCGGCACCGGTTCC CGGCATTCTCGATTATGCACAGGTGAGCGTTGAACATCGCGCCTGA
Upstream 100 bases:
>100_bases TCGGCAAAGGCCGATGCGTAGATCAACGAGTGCCGGAATGCCGTGTCCCGAAGATGGCGCGGCTTTCAGGCGAAAACAAT CCTGCCATGGAGGCGATGCG
Downstream 100 bases:
>100_bases AAAGCCGACTGTCGCCGCACTGGGTCTCGGCGGCAATATCGGCGATCCCGCCGCTGCCATGGCGCGGGCGCTGCGTGAAC TCGACGCGCATGATGATTGC
Product: dihydroneopterin aldolase
Products: NA
Alternate protein names: DHNA [H]
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSRYTIILKNCSFFARHGLLEQEEVLGQRFFVDAEMEVEAGDALETDDIENTVDYGVAFAVIEKSVVGQRRYLIEALAND IAKALRARYPQIVWLKITVRKPSAPVPGILDYAQVSVEHRA
Sequences:
>Translated_121_residues MSRYTIILKNCSFFARHGLLEQEEVLGQRFFVDAEMEVEAGDALETDDIENTVDYGVAFAVIEKSVVGQRRYLIEALAND IAKALRARYPQIVWLKITVRKPSAPVPGILDYAQVSVEHRA >Mature_120_residues SRYTIILKNCSFFARHGLLEQEEVLGQRFFVDAEMEVEAGDALETDDIENTVDYGVAFAVIEKSVVGQRRYLIEALANDI AKALRARYPQIVWLKITVRKPSAPVPGILDYAQVSVEHRA
Specific function: Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin [H]
COG id: COG1539
COG function: function code H; Dihydroneopterin aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHNA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006156 - InterPro: IPR006157 [H]
Pfam domain/function: PF02152 FolB [H]
EC number: =4.1.2.25 [H]
Molecular weight: Translated: 13656; Mature: 13525
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYTIILKNCSFFARHGLLEQEEVLGQRFFVDAEMEVEAGDALETDDIENTVDYGVAFA CCCEEEEEECCHHHHHCCCCCHHHHHHHHEEECCCEEECCCCCCCCCCCCHHHHHHHHHH VIEKSVVGQRRYLIEALANDIAKALRARYPQIVWLKITVRKPSAPVPGILDYAQVSVEHR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHEEECC A C >Mature Secondary Structure SRYTIILKNCSFFARHGLLEQEEVLGQRFFVDAEMEVEAGDALETDDIENTVDYGVAFA CCEEEEEECCHHHHHCCCCCHHHHHHHHEEECCCEEECCCCCCCCCCCCHHHHHHHHHH VIEKSVVGQRRYLIEALANDIAKALRARYPQIVWLKITVRKPSAPVPGILDYAQVSVEHR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHEEECC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9168622 [H]