Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159184669

Identifier: 159184669

GI number: 159184669

Start: 1207901

End: 1208545

Strand: Direct

Name: 159184669

Synonym: Atu1214

Alternate gene names: NA

Gene position: 1207901-1208545 (Clockwise)

Preceding gene: 159184668

Following gene: 15888555

Centisome position: 42.51

GC content: 59.84

Gene sequence:

>645_bases
ATGCCGAAGGTCGTCGTTCGCAATTTCGCCATTTCGCTTGACGGATATGGCGCAGGACCGGACCAGAGCCTGCAGAACCC
CTTGGGCGTTAAGGGCGAAGAGCTGCATCAATGGGCCTTCAAGACACGCACCTTCCACCGCATGTTCGGCAAGGAGGGTG
GCTCGACCGGGACGGACGAGAATTTTTCCGAAAAGAGCTTCGAGAATATCGGCGCCTGGGTCCTAGGCCGTAACATGTTC
GGTCCCGTGCGTGGTGCATGGCCGGATGAAAGCTGGAAGGGCTGGTGGGGCGAGGAGCCGCCTTATCATGTCCCGGTCTT
CGTCCTGACCCACCATGCGCGCCCTTCCTTCACCATGAAGGGCGGCACCGAATTCCATTTCGTCACCGATGGCATCGAGG
CAGCGCTCGATCGGGCGCTAACAGCTGCGAATGGCAAGGATGTCCGCATCGGCGGCGGCGTCTCGACCATCCGGCAATAT
ATGGCGGCGGGCATGATCGATGAGTTGCATCTGGCGCTTGCACCGGTGTTTCTCGGCAAGGGAGAGCAGCTTTTCGAAGG
GCTGGATTTGCCAGCACTTGGTTATCGCTGCACGGGAACGGTGGCGGGCGAGGGCGCAACGCATCTGATTATCGAGAAGG
TTTGA

Upstream 100 bases:

>100_bases
GGCCGGCGGGCAGATCCCCACGGCCGTCAATCTGGAACGCGAAATCTGAGGCTGGTTGCCGAACGCTGGTGAGCTGGCCT
CCCTGATGGAGGAGAATGCC

Downstream 100 bases:

>100_bases
TTGCTGCTCATAGGCTTTACGTGCTGAGGTTTCCCTCCACCCTCATTCCTGTGCTTGTCACAGGAATCCAGCGGACGCGC
GTCTGCGCGACGAGAGAGTC

Product: DNA-binding protein

Products: NA

Alternate protein names: Deaminase-Reductase Domain-Containing Protein; Bifunctional Deaminase-Reductase Domain-Containing Protein; Riboflavin Biosynthesis Protein RibD; Bifunctional Deaminase-Reductase-Like; Dihydrofolate Reductase; Bifunctional Deaminase-Reductase-Like Protein; Riboflavin Biosynthesis Protein; Deaminase-Reductase; Dihydrofolate Reductase Protein; Bifunctional Deaminase-Reductase C-Terminal Protein; Deaminase/Reductase; RibD Domain-Containing Protein; 5-Amino-6-(5-Phosphoribosylamino)Uracil Reductase; Riboflavin Biosynthesis Protein RibD Domain Protein; Bifunctional Deaminase-Reductase C-Terminal

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MPKVVVRNFAISLDGYGAGPDQSLQNPLGVKGEELHQWAFKTRTFHRMFGKEGGSTGTDENFSEKSFENIGAWVLGRNMF
GPVRGAWPDESWKGWWGEEPPYHVPVFVLTHHARPSFTMKGGTEFHFVTDGIEAALDRALTAANGKDVRIGGGVSTIRQY
MAAGMIDELHLALAPVFLGKGEQLFEGLDLPALGYRCTGTVAGEGATHLIIEKV

Sequences:

>Translated_214_residues
MPKVVVRNFAISLDGYGAGPDQSLQNPLGVKGEELHQWAFKTRTFHRMFGKEGGSTGTDENFSEKSFENIGAWVLGRNMF
GPVRGAWPDESWKGWWGEEPPYHVPVFVLTHHARPSFTMKGGTEFHFVTDGIEAALDRALTAANGKDVRIGGGVSTIRQY
MAAGMIDELHLALAPVFLGKGEQLFEGLDLPALGYRCTGTVAGEGATHLIIEKV
>Mature_213_residues
PKVVVRNFAISLDGYGAGPDQSLQNPLGVKGEELHQWAFKTRTFHRMFGKEGGSTGTDENFSEKSFENIGAWVLGRNMFG
PVRGAWPDESWKGWWGEEPPYHVPVFVLTHHARPSFTMKGGTEFHFVTDGIEAALDRALTAANGKDVRIGGGVSTIRQYM
AAGMIDELHLALAPVFLGKGEQLFEGLDLPALGYRCTGTVAGEGATHLIIEKV

Specific function: Unknown

COG id: COG0262

COG function: function code H; Dihydrofolate reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23346; Mature: 23215

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVVVRNFAISLDGYGAGPDQSLQNPLGVKGEELHQWAFKTRTFHRMFGKEGGSTGTDE
CCCEEEEEEEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
NFSEKSFENIGAWVLGRNMFGPVRGAWPDESWKGWWGEEPPYHVPVFVLTHHARPSFTMK
CCCHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEC
GGTEFHFVTDGIEAALDRALTAANGKDVRIGGGVSTIRQYMAAGMIDELHLALAPVFLGK
CCCEEEEECCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHCC
GEQLFEGLDLPALGYRCTGTVAGEGATHLIIEKV
CHHHHHCCCCCCCCEEEEEEECCCCCEEEEEECC
>Mature Secondary Structure 
PKVVVRNFAISLDGYGAGPDQSLQNPLGVKGEELHQWAFKTRTFHRMFGKEGGSTGTDE
CCEEEEEEEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
NFSEKSFENIGAWVLGRNMFGPVRGAWPDESWKGWWGEEPPYHVPVFVLTHHARPSFTMK
CCCHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEC
GGTEFHFVTDGIEAALDRALTAANGKDVRIGGGVSTIRQYMAAGMIDELHLALAPVFLGK
CCCEEEEECCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHCC
GEQLFEGLDLPALGYRCTGTVAGEGATHLIIEKV
CHHHHHCCCCCCCCEEEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA