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The map label for this gene is acpD

Identifier: 159184667

GI number: 159184667

Start: 1201795

End: 1202412

Strand: Reverse

Name: acpD

Synonym: Atu1208

Alternate gene names: 159184667

Gene position: 1202412-1201795 (Counterclockwise)

Preceding gene: 15888546

Following gene: 159184663

Centisome position: 42.31

GC content: 61.33

Gene sequence:

>618_bases
ATGTCCAACATTCTGCTCATCACCTCCAGCCCGCGCGGCGACGAGTCCGTTTCGAACAAGTTCGCCGGTGAACTGGCTGG
CAAGCTGAAGGCCAAGTCGGCTTCCAACACCCTTGTCCACCGCGATCTCGCCGCTGATCCGATTCCGCATCTCGACACCG
TCAAGACCGCCGCGATCCGCAAGCCCGCCGACCAGCGCACGGCCGAAGAATCGGTTGCTGCCGATTACTCCGACAAGCTC
GTCACCGAGCTTCTGGCCGCCGACACTGTCGTCATCGGCACCGGCCTCATCAACTTCAACATCTATTCCGGCCTGAAGTC
ATGGATCGACAACGTCGCCCGCGCCGGCCAGACCTTCAAATACACCGAAACCGGCCCGGTTGGCCTCGCCACCGGCAAGA
AGGTCTATATCGTGCTGGCCGCCGCCGGCGTTTATTCCGAAGGCCCGGCCGTTTCGATGAACCACGCCGTTCCCTACCTC
AAGACCGTTCTTGGCTTCATGGGCATGACTGACGTGGAAGTTATCTATGTCGAAGGCCTGGCGTTCGGCCCGGAAGCCGT
CGAAAAGGCCGTTGCTGCTGCCGAAGCCAAGGTCGAAGAACTAGCGCAGGCCGCCTGA

Upstream 100 bases:

>100_bases
GATGGCAGTAATTTTTCATATAGAGCGCAAAGGCAGGGCATCGTGCTCTCCCGCCCTCCCAAGGCGCCCGTCAATTCATC
GCATAAGCAAGGAAAAGACC

Downstream 100 bases:

>100_bases
TTCCCGTTGAATGAAGGCTGATGCGGGCTATCGCCGGCATCAGCCGACCCACATGCCATGACGGCCGTGGACCTGGTCCC
GGCCGTTATTTTTTGCCGCG

Product: acyl-carrier-protein phosphodiesterase

Products: 4'-phosphopantetheine; apoprotein

Alternate protein names: Azo-dye reductase; FMN-dependent NADH-azo compound oxidoreductase

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSNILLITSSPRGDESVSNKFAGELAGKLKAKSASNTLVHRDLAADPIPHLDTVKTAAIRKPADQRTAEESVAADYSDKL
VTELLAADTVVIGTGLINFNIYSGLKSWIDNVARAGQTFKYTETGPVGLATGKKVYIVLAAAGVYSEGPAVSMNHAVPYL
KTVLGFMGMTDVEVIYVEGLAFGPEAVEKAVAAAEAKVEELAQAA

Sequences:

>Translated_205_residues
MSNILLITSSPRGDESVSNKFAGELAGKLKAKSASNTLVHRDLAADPIPHLDTVKTAAIRKPADQRTAEESVAADYSDKL
VTELLAADTVVIGTGLINFNIYSGLKSWIDNVARAGQTFKYTETGPVGLATGKKVYIVLAAAGVYSEGPAVSMNHAVPYL
KTVLGFMGMTDVEVIYVEGLAFGPEAVEKAVAAAEAKVEELAQAA
>Mature_204_residues
SNILLITSSPRGDESVSNKFAGELAGKLKAKSASNTLVHRDLAADPIPHLDTVKTAAIRKPADQRTAEESVAADYSDKLV
TELLAADTVVIGTGLINFNIYSGLKSWIDNVARAGQTFKYTETGPVGLATGKKVYIVLAAAGVYSEGPAVSMNHAVPYLK
TVLGFMGMTDVEVIYVEGLAFGPEAVEKAVAAAEAKVEELAQAA

Specific function: Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity

COG id: COG1182

COG function: function code I; Acyl carrier protein phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the azoreductase type 1 family

Homologues:

Organism=Escherichia coli, GI1787680, Length=204, Percent_Identity=40.1960784313725, Blast_Score=155, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): AZOR_AGRT5 (Q8UG34)

Other databases:

- EMBL:   AE007869
- PIR:   A97507
- PIR:   AE2725
- RefSeq:   NP_354225.2
- ProteinModelPortal:   Q8UG34
- SMR:   Q8UG34
- STRING:   Q8UG34
- GeneID:   1133246
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu1208
- eggNOG:   COG1182
- HOGENOM:   HBG565834
- OMA:   WIDNVAR
- PhylomeDB:   Q8UG34
- ProtClustDB:   CLSK863494
- BioCyc:   ATUM176299-1:ATU1208-MONOMER
- HAMAP:   MF_01216
- InterPro:   IPR003680
- InterPro:   IPR023048

Pfam domain/function: PF02525 Flavodoxin_2

EC number: 3.1.4.14

Molecular weight: Translated: 21498; Mature: 21366

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNILLITSSPRGDESVSNKFAGELAGKLKAKSASNTLVHRDLAADPIPHLDTVKTAAIR
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCCCCHHHHHHHHC
KPADQRTAEESVAADYSDKLVTELLAADTVVIGTGLINFNIYSGLKSWIDNVARAGQTFK
CCCHHHHHHHHHHHCHHHHHHHHHHHHCCEEEECCEEEEHHHHHHHHHHHHHHHCCCCEE
YTETGPVGLATGKKVYIVLAAAGVYSEGPAVSMNHAVPYLKTVLGFMGMTDVEVIYVEGL
ECCCCCEECCCCCEEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEEECC
AFGPEAVEKAVAAAEAKVEELAQAA
CCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNILLITSSPRGDESVSNKFAGELAGKLKAKSASNTLVHRDLAADPIPHLDTVKTAAIR
CCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCCCCHHHHHHHHC
KPADQRTAEESVAADYSDKLVTELLAADTVVIGTGLINFNIYSGLKSWIDNVARAGQTFK
CCCHHHHHHHHHHHCHHHHHHHHHHHHCCEEEECCEEEEHHHHHHHHHHHHHHHCCCCEE
YTETGPVGLATGKKVYIVLAAAGVYSEGPAVSMNHAVPYLKTVLGFMGMTDVEVIYVEGL
ECCCCCEECCCCCEEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEEECC
AFGPEAVEKAVAAAEAKVEELAQAA
CCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: [acyl-carrier protein]; H2O

Specific reaction: [acyl-carrier protein] + H2O = 4'-phosphopantetheine + apoprotein

General reaction: Phosphoric ester hydrolysis [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194