Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184655
Identifier: 159184655
GI number: 159184655
Start: 1179381
End: 1179599
Strand: Reverse
Name: 159184655
Synonym: Atu1185
Alternate gene names: NA
Gene position: 1179599-1179381 (Counterclockwise)
Preceding gene: 15888539
Following gene: 159184649
Centisome position: 41.51
GC content: 55.71
Gene sequence:
>219_bases GTGTCGAGCTTCATTTCGCCCAAGTCTTTCGGGGCTGCGCCGTATATTGCGGGCGTTAGGTTCGTCATTCGCATTTCCTA TTTGTCAGGTGCGCTTGACCAGACGAAAGCCAGCCCGAACCTGGGCGACTGTCTGGTTCAACATGCGCTGTGCGTTTTGG ATGTTGAGTGCTGCTTGGTGACCGGGCTTACTCGCCAGCTCTTCCCGATGGAGGGATAA
Upstream 100 bases:
>100_bases ATGGGCGTGACCGTCCGAGTACCGGCCAAGGTTGGGCAACTGCTCGGAATATGTTCCGGGCATCTTGATTGGCAGGTAGA TCCAGAACATCATCTCGGAA
Downstream 100 bases:
>100_bases GGTGCGGCACCATGAGGAGACTGTGTTCAGCGTGATCTCAGGAGGCGTCACTTTTGAACGCCCCCGCGATCTTCTGGAGG AGTGAACGCTTGGGTGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MSSFISPKSFGAAPYIAGVRFVIRISYLSGALDQTKASPNLGDCLVQHALCVLDVECCLVTGLTRQLFPMEG
Sequences:
>Translated_72_residues MSSFISPKSFGAAPYIAGVRFVIRISYLSGALDQTKASPNLGDCLVQHALCVLDVECCLVTGLTRQLFPMEG >Mature_71_residues SSFISPKSFGAAPYIAGVRFVIRISYLSGALDQTKASPNLGDCLVQHALCVLDVECCLVTGLTRQLFPMEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7708; Mature: 7577
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFISPKSFGAAPYIAGVRFVIRISYLSGALDQTKASPNLGDCLVQHALCVLDVECCLV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH TGLTRQLFPMEG HHHHHHHCCCCC >Mature Secondary Structure SSFISPKSFGAAPYIAGVRFVIRISYLSGALDQTKASPNLGDCLVQHALCVLDVECCLV CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH TGLTRQLFPMEG HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA