| Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
|---|---|
| Accession | NC_003062 |
| Length | 2,841,580 |
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The map label for this gene is ppk [H]
Identifier: 159184636
GI number: 159184636
Start: 1132974
End: 1135172
Strand: Direct
Name: ppk [H]
Synonym: Atu1144
Alternate gene names: 159184636
Gene position: 1132974-1135172 (Clockwise)
Preceding gene: 15888480
Following gene: 15888482
Centisome position: 39.87
GC content: 58.62
Gene sequence:
>2199_bases ATGGACGCTATCGCGCAGGAAGACTTCAACAAGGTGCAGCCGGTGGCTGAGGTCGAGAACCTCTGGGACAGCCCGGCGCG TTTCATCAACCGCGAATTCTCCTGGCTGCAGTTCAACCGCCGTGTTCTCGAGGAAACGCTGAACACGGATCACCCGCTTC TGGAACGGCTGCGCTTCCTGTCCATCTCGGCCGCCAATCTTGATGAATTCTTCATGGTCCGCGTCGCCGGTCTCGAAGGC CAGGTGCGCCAGAAGATCACCGTCAGGACGCCCGACGGCAAGACACCGGCCGAGCAGTTGGAAGATATTCTAAAGGAAAT CGACAATCTGCAGATGGAGCAACAGGCCTCGCTTGCCGTCCTGCAGCAATATCTCGCCAAGGAAGAAATCTTCATCGTGC GGCCTGCCGCACTTTCCGAAGCGGACCGTACCTGGCTTGGCACCGAATTCGAGGAACGTATTTTCCCGGTGCTGACGCCG CTGTCCATCGACCCTGCGCACCCGTTTCCCTTCATTCCGAACCTAGGCTTCTCCATGGGCCTGCAGCTCGACAGCGTCAA CGGCCGCGAGCCGATGACGGCGCTGTTGCGTCTGCCCACGGCGCTCGATCGCTTCGTTCGTTTGCCGGATGAAAAAAACG CCATCCGTTACATCACGCTGGAAGATGTGGTCGGCCTGTTCATTCACCGGCTTTATCCGGGCTATACCGTTCGAGGATTC GGCACGTTCCGCATCATCAGAGACAGCGATATCGAGGTGGAGGAAGAGGCGGAAGATCTGGTTCGCTTTTTCGAAAGCGC GCTGAAGCGCCGCCGCCGCGGTTCGGTCATCCGCATCGAGACCGATAGCGAAATGCCGCCGTCGCTGCGCCAGTTCGTGG TGCATGAGCTTGGCGTGCCTGATAATCGCGTTGCTGTTCTGCCCGGTTTGCTCGCGCTCAACACCATTTCGGAAATCGTG CGTGCGCCGCGCGACGACCTGAAATTCGAGCCTTACAACGCCCGTTTCCCGGAGCGCGTGCGCGAACATGCCGGCGATTG CCTCGCTGCCATCCGCGAAAAGGACATGGTGGTTCACCACCCCTATGAAAGCTTCGACGTGGTTGTGCAGTTCCTGTTGC AGGCTGCGCGCGATCCCGAAGTGCTTGCCATTAAGCAGACGCTTTACCGCACCTCCAATGACAGCCCGATCGTTCGTGCG CTGATTGACGCGGCGGAAGCCGGCAAATCCGTGACCGCGCTGGTCGAGTTGAAGGCGCGTTTCGACGAAGAGGCGAACAT CCGCTGGGCGCGCGATCTGGAGCGCGCCGGTGTGCAGGTCGTGTTCGGCTTCATCGAACTCAAGACCCATGCCAAGATGT CGATGGTGGTGCGCCGCGAAGACGGCAAACTCAGAACCTATTGCCACCTCGGCACCGGTAACTATCACCCGATCACGGCG AAGATTTATACCGACCTGTCCTTCTTCACCTGCAACCCGAAGATCGCCCATGACATGGCGAATATCTTCAACTTCATCAC GGGTTACGGCGAACCGGAAGAGGGCATGAAGCTCGCCATTTCGCCTTACACGCTGCGCGCCCGCATCGTGAAGCACATCA ACGAAGAGATCGAGCACGCCAAGCGCGGTGCGCCGGCGGCGATCTGGATGAAGATGAATTCGCTGGTCGACCCTGAAATC ATCGATACGCTTTACCGTGCCAGTGCGGCGGGCGTTGAGATCGATCTGGTAATCCGCGGTATCTGCTGCCTGCGCCCGCA GGTGGCGGGACTGTCGGATAACATCCGCGTCAAATCCATCGTCGGCCGCTTCCTGGAACACAGCCGCATCTTCTGCTTCG GCAATGGTTTCGGCCTGCCATCCGACAAGGCTCTGGTCTATATCGGCTCTGCCGACATGATGCCGCGTAACCTTGATCGG CGCGTCGAAACGCTGGTGCCGCTCACCAATCCCACCGTGCATGAGCAGGTTCTTTCACAGATTATGCTGGGCAATCTCAT TGACAACCAGCAGAGCTACGAGATACTTGCGGACGGAACGTCGAGGCGCATCGAGGTGCGTAAAGGCGAAGAACCGTTCA ACGCGCAGCACTATTTCATGACCAATCCCAGCCTTTCCGGACGTGGTGAAGCCTTGAAATCCAGTGCGCCCAAATTGATT GCCGGGTTGATTTCGTCCCGCAAGAAACAGGCTGAATGA
Upstream 100 bases:
>100_bases TGTCACAGTTCCGTCGTCAAACTGTTATACGGGCAAGAAGGACGATCACGCGATGCAGCAGGATCACGGGACGGCAATCG GTCAGGGGACGGAACAGGGC
Downstream 100 bases:
>100_bases CTCGATCAGAAGCACAGGGGCGGCTGACCGGCCTTGCCCCCGTTTCCGTCATAGATATTGGTTCGAACTCCGTTCGTCTT GTCGTATATGAAGGTCTTTC
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 732; Mature: 732
Protein sequence:
>732_residues MDAIAQEDFNKVQPVAEVENLWDSPARFINREFSWLQFNRRVLEETLNTDHPLLERLRFLSISAANLDEFFMVRVAGLEG QVRQKITVRTPDGKTPAEQLEDILKEIDNLQMEQQASLAVLQQYLAKEEIFIVRPAALSEADRTWLGTEFEERIFPVLTP LSIDPAHPFPFIPNLGFSMGLQLDSVNGREPMTALLRLPTALDRFVRLPDEKNAIRYITLEDVVGLFIHRLYPGYTVRGF GTFRIIRDSDIEVEEEAEDLVRFFESALKRRRRGSVIRIETDSEMPPSLRQFVVHELGVPDNRVAVLPGLLALNTISEIV RAPRDDLKFEPYNARFPERVREHAGDCLAAIREKDMVVHHPYESFDVVVQFLLQAARDPEVLAIKQTLYRTSNDSPIVRA LIDAAEAGKSVTALVELKARFDEEANIRWARDLERAGVQVVFGFIELKTHAKMSMVVRREDGKLRTYCHLGTGNYHPITA KIYTDLSFFTCNPKIAHDMANIFNFITGYGEPEEGMKLAISPYTLRARIVKHINEEIEHAKRGAPAAIWMKMNSLVDPEI IDTLYRASAAGVEIDLVIRGICCLRPQVAGLSDNIRVKSIVGRFLEHSRIFCFGNGFGLPSDKALVYIGSADMMPRNLDR RVETLVPLTNPTVHEQVLSQIMLGNLIDNQQSYEILADGTSRRIEVRKGEEPFNAQHYFMTNPSLSGRGEALKSSAPKLI AGLISSRKKQAE
Sequences:
>Translated_732_residues MDAIAQEDFNKVQPVAEVENLWDSPARFINREFSWLQFNRRVLEETLNTDHPLLERLRFLSISAANLDEFFMVRVAGLEG QVRQKITVRTPDGKTPAEQLEDILKEIDNLQMEQQASLAVLQQYLAKEEIFIVRPAALSEADRTWLGTEFEERIFPVLTP LSIDPAHPFPFIPNLGFSMGLQLDSVNGREPMTALLRLPTALDRFVRLPDEKNAIRYITLEDVVGLFIHRLYPGYTVRGF GTFRIIRDSDIEVEEEAEDLVRFFESALKRRRRGSVIRIETDSEMPPSLRQFVVHELGVPDNRVAVLPGLLALNTISEIV RAPRDDLKFEPYNARFPERVREHAGDCLAAIREKDMVVHHPYESFDVVVQFLLQAARDPEVLAIKQTLYRTSNDSPIVRA LIDAAEAGKSVTALVELKARFDEEANIRWARDLERAGVQVVFGFIELKTHAKMSMVVRREDGKLRTYCHLGTGNYHPITA KIYTDLSFFTCNPKIAHDMANIFNFITGYGEPEEGMKLAISPYTLRARIVKHINEEIEHAKRGAPAAIWMKMNSLVDPEI IDTLYRASAAGVEIDLVIRGICCLRPQVAGLSDNIRVKSIVGRFLEHSRIFCFGNGFGLPSDKALVYIGSADMMPRNLDR RVETLVPLTNPTVHEQVLSQIMLGNLIDNQQSYEILADGTSRRIEVRKGEEPFNAQHYFMTNPSLSGRGEALKSSAPKLI AGLISSRKKQAE >Mature_732_residues MDAIAQEDFNKVQPVAEVENLWDSPARFINREFSWLQFNRRVLEETLNTDHPLLERLRFLSISAANLDEFFMVRVAGLEG QVRQKITVRTPDGKTPAEQLEDILKEIDNLQMEQQASLAVLQQYLAKEEIFIVRPAALSEADRTWLGTEFEERIFPVLTP LSIDPAHPFPFIPNLGFSMGLQLDSVNGREPMTALLRLPTALDRFVRLPDEKNAIRYITLEDVVGLFIHRLYPGYTVRGF GTFRIIRDSDIEVEEEAEDLVRFFESALKRRRRGSVIRIETDSEMPPSLRQFVVHELGVPDNRVAVLPGLLALNTISEIV RAPRDDLKFEPYNARFPERVREHAGDCLAAIREKDMVVHHPYESFDVVVQFLLQAARDPEVLAIKQTLYRTSNDSPIVRA LIDAAEAGKSVTALVELKARFDEEANIRWARDLERAGVQVVFGFIELKTHAKMSMVVRREDGKLRTYCHLGTGNYHPITA KIYTDLSFFTCNPKIAHDMANIFNFITGYGEPEEGMKLAISPYTLRARIVKHINEEIEHAKRGAPAAIWMKMNSLVDPEI IDTLYRASAAGVEIDLVIRGICCLRPQVAGLSDNIRVKSIVGRFLEHSRIFCFGNGFGLPSDKALVYIGSADMMPRNLDR RVETLVPLTNPTVHEQVLSQIMLGNLIDNQQSYEILADGTSRRIEVRKGEEPFNAQHYFMTNPSLSGRGEALKSSAPKLI AGLISSRKKQAE
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=682, Percent_Identity=33.5777126099707, Blast_Score=371, Evalue=1e-104,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 82932; Mature: 82932
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAIAQEDFNKVQPVAEVENLWDSPARFINREFSWLQFNRRVLEETLNTDHPLLERLRFL CCCCHHHHHHHCCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH SISAANLDEFFMVRVAGLEGQVRQKITVRTPDGKTPAEQLEDILKEIDNLQMEQQASLAV HCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH LQQYLAKEEIFIVRPAALSEADRTWLGTEFEERIFPVLTPLSIDPAHPFPFIPNLGFSMG HHHHHCCCCEEEECCHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHC LQLDSVNGREPMTALLRLPTALDRFVRLPDEKNAIRYITLEDVVGLFIHRLYPGYTVRGF EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEECC GTFRIIRDSDIEVEEEAEDLVRFFESALKRRRRGSVIRIETDSEMPPSLRQFVVHELGVP EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCC DNRVAVLPGLLALNTISEIVRAPRDDLKFEPYNARFPERVREHAGDCLAAIREKDMVVHH CCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEC PYESFDVVVQFLLQAARDPEVLAIKQTLYRTSNDSPIVRALIDAAEAGKSVTALVELKAR CCHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH FDEEANIRWARDLERAGVQVVFGFIELKTHAKMSMVVRREDGKLRTYCHLGTGNYHPITA CCCCCCCHHHHHHHHCCCEEEEHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCEEEE KIYTDLSFFTCNPKIAHDMANIFNFITGYGEPEEGMKLAISPYTLRARIVKHINEEIEHA EEEECEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHH KRGAPAAIWMKMNSLVDPEIIDTLYRASAAGVEIDLVIRGICCLRPQVAGLSDNIRVKSI HCCCCEEEEEEHHCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCCHHHH VGRFLEHSRIFCFGNGFGLPSDKALVYIGSADMMPRNLDRRVETLVPLTNPTVHEQVLSQ HHHHHHCCEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH IMLGNLIDNQQSYEILADGTSRRIEVRKGEEPFNAQHYFMTNPSLSGRGEALKSSAPKLI HHHHHHHCCCCCCEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHCCHHHH AGLISSRKKQAE HHHHHHHHHCCC >Mature Secondary Structure MDAIAQEDFNKVQPVAEVENLWDSPARFINREFSWLQFNRRVLEETLNTDHPLLERLRFL CCCCHHHHHHHCCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH SISAANLDEFFMVRVAGLEGQVRQKITVRTPDGKTPAEQLEDILKEIDNLQMEQQASLAV HCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH LQQYLAKEEIFIVRPAALSEADRTWLGTEFEERIFPVLTPLSIDPAHPFPFIPNLGFSMG HHHHHCCCCEEEECCHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHC LQLDSVNGREPMTALLRLPTALDRFVRLPDEKNAIRYITLEDVVGLFIHRLYPGYTVRGF EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEECC GTFRIIRDSDIEVEEEAEDLVRFFESALKRRRRGSVIRIETDSEMPPSLRQFVVHELGVP EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCC DNRVAVLPGLLALNTISEIVRAPRDDLKFEPYNARFPERVREHAGDCLAAIREKDMVVHH CCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEC PYESFDVVVQFLLQAARDPEVLAIKQTLYRTSNDSPIVRALIDAAEAGKSVTALVELKAR CCHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH FDEEANIRWARDLERAGVQVVFGFIELKTHAKMSMVVRREDGKLRTYCHLGTGNYHPITA CCCCCCCHHHHHHHHCCCEEEEHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCEEEE KIYTDLSFFTCNPKIAHDMANIFNFITGYGEPEEGMKLAISPYTLRARIVKHINEEIEHA EEEECEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHH KRGAPAAIWMKMNSLVDPEIIDTLYRASAAGVEIDLVIRGICCLRPQVAGLSDNIRVKSI HCCCCEEEEEEHHCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCCHHHH VGRFLEHSRIFCFGNGFGLPSDKALVYIGSADMMPRNLDRRVETLVPLTNPTVHEQVLSQ HHHHHHCCEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH IMLGNLIDNQQSYEILADGTSRRIEVRKGEEPFNAQHYFMTNPSLSGRGEALKSSAPKLI HHHHHHHCCCCCCEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHCCHHHH AGLISSRKKQAE HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA