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The map label for this gene is ydhP [H]

Identifier: 159184567

GI number: 159184567

Start: 996762

End: 997847

Strand: Reverse

Name: ydhP [H]

Synonym: Atu1000

Alternate gene names: 159184567

Gene position: 997847-996762 (Counterclockwise)

Preceding gene: 159184571

Following gene: 15888342

Centisome position: 35.12

GC content: 64.09

Gene sequence:

>1086_bases
ATGGGCCTGCTGCCTGACGTCGCCACCACCTATGGCGTCACCGTTCCGCAGGCGGGTTATGTCATCACGGCCTATGCGCT
GGGCGTCGTCATCGGCGCGCCGATCATCGCCGTGCTGGCTGCGCGCATAACACGCCGCACGCTGCTTCTTGGCCTGATGG
GACTTTTTGCGGCCGGCAACATCTTGAGCGCGCTTGCGCCTGACTTCCTGAGCTTCACCCTGCTGCGTTTCGTTACCGGC
CTGCCACATGGTGCCTATTTCGGCGTTGCAGCACTGGTGGCGGCCTCCATGGCGCCTATCCACAAGCGTGCCCGCGCGGT
TGGCCGCGTCATGCTCGGTCTCACCATTGCCACCCTGCTCGGCACGCCGCTTGCCACTTTCTTCGGCCAGCTCCTGTCCT
GGCGTGCGGCCTTCATGCTGGTGGGCGGCATCGGGCTCCTGACAGTCGCGCTTCTGTGGCTGTTCCAGCCGCGTGACAAG
GTGGAGGAAGGCGCAAGCGTCTGGCGCGAACTCGGCGCATTCAGGCGCGTGCAGGTGTGGCTGACGCTCGCCATCGCCGC
CGTTGGTTTCGGCGGCATGTTCTCGGTGTTCAGCTATATCGCCAAGACCACCACCGATGTGGCGATGATGCCGGTGTCCA
CCGTATCCATGGTGCTGGCGCTGTTCGGCATCGGCATGAATGTCGGCAATGTCGTCGGCTCACGGCTCGCCGATATCTCG
CTCAATGGCACGATTGGCGGCATGCTGGCCTTCAACGTGCTGGCCATGACGGTGTTCGGCATGACGGCGGACAATCCGTT
CATGCTGTGCATCTGCGTGTTCCTGATCGGCTGCGGTTTTGCCGCCTGCCCGGCCGTGCAGACCCGGCTGATGGATGTGG
CGCAGGATGCGCAGACGCTGGCGGCCGCCTCCAACCATTCCGCCTTCAACATTGCCAATGCGCTCGGCGCCTGGCTTGGC
GGCCTCGTCATCGCCATGGGTTTCGGTTACGCCTCGACAGGGTATGTCGGCGCGGTCCTTTCCCTTCTCGGGCTTGGCGT
TTTCCTTGTTTCGGTCACCGTCGAACGGCGCGCAAAAGCCGGCTGA

Upstream 100 bases:

>100_bases
GGCAGCACCAGCCGTCGCCCTTTCACCGCTTGCCATCGCGCTGATCGAACTGGCGCTGGCCGCCGGCGGTTTCGGCATCG
GCACCGGCGAATTCGCCATC

Downstream 100 bases:

>100_bases
CAGCCGGTTTTTCAGCGGTCGAAACGCCCTCTCCGGCACGCTTCAGAAACCTTACGGAAATTTCACAATCGGCTCGCTTG
ACTCTTTTTCGTTTCAGGCG

Product: MFS permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MGLLPDVATTYGVTVPQAGYVITAYALGVVIGAPIIAVLAARITRRTLLLGLMGLFAAGNILSALAPDFLSFTLLRFVTG
LPHGAYFGVAALVAASMAPIHKRARAVGRVMLGLTIATLLGTPLATFFGQLLSWRAAFMLVGGIGLLTVALLWLFQPRDK
VEEGASVWRELGAFRRVQVWLTLAIAAVGFGGMFSVFSYIAKTTTDVAMMPVSTVSMVLALFGIGMNVGNVVGSRLADIS
LNGTIGGMLAFNVLAMTVFGMTADNPFMLCICVFLIGCGFAACPAVQTRLMDVAQDAQTLAAASNHSAFNIANALGAWLG
GLVIAMGFGYASTGYVGAVLSLLGLGVFLVSVTVERRAKAG

Sequences:

>Translated_361_residues
MGLLPDVATTYGVTVPQAGYVITAYALGVVIGAPIIAVLAARITRRTLLLGLMGLFAAGNILSALAPDFLSFTLLRFVTG
LPHGAYFGVAALVAASMAPIHKRARAVGRVMLGLTIATLLGTPLATFFGQLLSWRAAFMLVGGIGLLTVALLWLFQPRDK
VEEGASVWRELGAFRRVQVWLTLAIAAVGFGGMFSVFSYIAKTTTDVAMMPVSTVSMVLALFGIGMNVGNVVGSRLADIS
LNGTIGGMLAFNVLAMTVFGMTADNPFMLCICVFLIGCGFAACPAVQTRLMDVAQDAQTLAAASNHSAFNIANALGAWLG
GLVIAMGFGYASTGYVGAVLSLLGLGVFLVSVTVERRAKAG
>Mature_360_residues
GLLPDVATTYGVTVPQAGYVITAYALGVVIGAPIIAVLAARITRRTLLLGLMGLFAAGNILSALAPDFLSFTLLRFVTGL
PHGAYFGVAALVAASMAPIHKRARAVGRVMLGLTIATLLGTPLATFFGQLLSWRAAFMLVGGIGLLTVALLWLFQPRDKV
EEGASVWRELGAFRRVQVWLTLAIAAVGFGGMFSVFSYIAKTTTDVAMMPVSTVSMVLALFGIGMNVGNVVGSRLADISL
NGTIGGMLAFNVLAMTVFGMTADNPFMLCICVFLIGCGFAACPAVQTRLMDVAQDAQTLAAASNHSAFNIANALGAWLGG
LVIAMGFGYASTGYVGAVLSLLGLGVFLVSVTVERRAKAG

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=360, Percent_Identity=38.0555555555556, Blast_Score=221, Evalue=7e-59,
Organism=Escherichia coli, GI1786595, Length=367, Percent_Identity=31.0626702997275, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI1787808, Length=364, Percent_Identity=26.0989010989011, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI145693198, Length=338, Percent_Identity=24.8520710059172, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 37467; Mature: 37336

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLPDVATTYGVTVPQAGYVITAYALGVVIGAPIIAVLAARITRRTLLLGLMGLFAAGN
CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSALAPDFLSFTLLRFVTGLPHGAYFGVAALVAASMAPIHKRARAVGRVMLGLTIATLL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTPLATFFGQLLSWRAAFMLVGGIGLLTVALLWLFQPRDKVEEGASVWRELGAFRRVQVW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LTLAIAAVGFGGMFSVFSYIAKTTTDVAMMPVSTVSMVLALFGIGMNVGNVVGSRLADIS
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCEE
LNGTIGGMLAFNVLAMTVFGMTADNPFMLCICVFLIGCGFAACPAVQTRLMDVAQDAQTL
ECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AAASNHSAFNIANALGAWLGGLVIAMGFGYASTGYVGAVLSLLGLGVFLVSVTVERRAKA
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
G
C
>Mature Secondary Structure 
GLLPDVATTYGVTVPQAGYVITAYALGVVIGAPIIAVLAARITRRTLLLGLMGLFAAGN
CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSALAPDFLSFTLLRFVTGLPHGAYFGVAALVAASMAPIHKRARAVGRVMLGLTIATLL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTPLATFFGQLLSWRAAFMLVGGIGLLTVALLWLFQPRDKVEEGASVWRELGAFRRVQVW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LTLAIAAVGFGGMFSVFSYIAKTTTDVAMMPVSTVSMVLALFGIGMNVGNVVGSRLADIS
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCEE
LNGTIGGMLAFNVLAMTVFGMTADNPFMLCICVFLIGCGFAACPAVQTRLMDVAQDAQTL
ECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AAASNHSAFNIANALGAWLGGLVIAMGFGYASTGYVGAVLSLLGLGVFLVSVTVERRAKA
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]