Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184561
Identifier: 159184561
GI number: 159184561
Start: 977113
End: 977433
Strand: Reverse
Name: 159184561
Synonym: Atu0983
Alternate gene names: NA
Gene position: 977433-977113 (Counterclockwise)
Preceding gene: 15888327
Following gene: 15888325
Centisome position: 34.4
GC content: 62.62
Gene sequence:
>321_bases ATGACGGACATGTCGAGGACCAGCGCTTCGTTTCAGCGCTTCATGACCGATGCCCCGGCCCACAAGGCGGCATGGTTTCA GGCCATTCAGGGTCTCGGTGCGGCCTCCACGCTGGATGTGAAAACGCAGAGCCTGATCTATATCGGCATTCTGGCCGCAC TGCGCCTGGAAAGCGGCATCGGTTTTCATGTGATGGAAGCCAAGGCGCGCGGTGCGAGCCGCGAGGATATCATCAGCGCG GTGCTCACCGGCCTCCCCGCCGCCGGCAATGCCGTGATCGGCGCGCTCGGGCCTGCATTGGATGCTTTCGACGGCATTTG A
Upstream 100 bases:
>100_bases CCATGACGCCGTCTTGATTTCCATCAAGGCGGCGTCATGCATTGCGCCGCATCATGCTGTGGAAGGGCCGAAGGCGCCCG CGATCAGAAAGGAATTGCAG
Downstream 100 bases:
>100_bases GCACGTCCCCGCACCACCGGAATTGAGGTGTCGGCTCACTGTTTTTCTTCATGAATCCCGCTTTCCCCCAAACCGGCACA GATTGTCCCGAAAAAATACG
Product: hypothetical protein
Products: NA
Alternate protein names: Carboxymuconolactone Decarboxylase Family Protein
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MTDMSRTSASFQRFMTDAPAHKAAWFQAIQGLGAASTLDVKTQSLIYIGILAALRLESGIGFHVMEAKARGASREDIISA VLTGLPAAGNAVIGALGPALDAFDGI
Sequences:
>Translated_106_residues MTDMSRTSASFQRFMTDAPAHKAAWFQAIQGLGAASTLDVKTQSLIYIGILAALRLESGIGFHVMEAKARGASREDIISA VLTGLPAAGNAVIGALGPALDAFDGI >Mature_105_residues TDMSRTSASFQRFMTDAPAHKAAWFQAIQGLGAASTLDVKTQSLIYIGILAALRLESGIGFHVMEAKARGASREDIISAV LTGLPAAGNAVIGALGPALDAFDGI
Specific function: Unknown
COG id: COG0599
COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10963; Mature: 10832
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDMSRTSASFQRFMTDAPAHKAAWFQAIQGLGAASTLDVKTQSLIYIGILAALRLESGI CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC GFHVMEAKARGASREDIISAVLTGLPAAGNAVIGALGPALDAFDGI CEEEEEHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TDMSRTSASFQRFMTDAPAHKAAWFQAIQGLGAASTLDVKTQSLIYIGILAALRLESGI CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC GFHVMEAKARGASREDIISAVLTGLPAAGNAVIGALGPALDAFDGI CEEEEEHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA