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The map label for this gene is ytfH [H]

Identifier: 159184547

GI number: 159184547

Start: 936925

End: 937293

Strand: Reverse

Name: ytfH [H]

Synonym: Atu0948

Alternate gene names: 159184547

Gene position: 937293-936925 (Counterclockwise)

Preceding gene: 159184548

Following gene: 15888285

Centisome position: 32.98

GC content: 60.98

Gene sequence:

>369_bases
ATGGAACACATCTATGACGTCTATGAGGATCGCTGCCCCACCCGCATGGTGCTGGACAGGATCGCCGACAAATGGGCGCT
ACTGATACTCGACAAATTGCGGGTGGATGCGGTGCGCTTCAACCTGCTGCGGCGGGAGATTAAGGGCATTTCGCAGAAGG
TGCTGTCGCAGACGCTGAAGAAGCTCGAGCGCGACGGCCTGATTTCACGGCAGGCCTTTCCGACCGTGCCGGTGACGGTC
GAATATTCGCTGACGCCGCTGGGGCGGACGCTGACCGAAACGGTGGCGGCACTCGCCCATTGGGCGGAAGGCAATATCGA
GGCGGTGATGGCGGCGCAGAGGGCTTATGATGAGAGGGTAGCGGCTTAG

Upstream 100 bases:

>100_bases
TTGGAGAAATCATGAAAAGAGAGCACTTTTCGGTTATCTGGTTTCCTCGTGGAAACCGGATTTCTCCCGAAAGATGCCGC
TGAAAGCACGGAACAAACCG

Downstream 100 bases:

>100_bases
CCCGTGACAGCCCCTATACTCCCCGTAATCGCTATCGCGAAATCCGCGTGGACAGAATGATCGACGACAGCGTGCGCTCC
ACGCCATCAAGTGCGCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MEHIYDVYEDRCPTRMVLDRIADKWALLILDKLRVDAVRFNLLRREIKGISQKVLSQTLKKLERDGLISRQAFPTVPVTV
EYSLTPLGRTLTETVAALAHWAEGNIEAVMAAQRAYDERVAA

Sequences:

>Translated_122_residues
MEHIYDVYEDRCPTRMVLDRIADKWALLILDKLRVDAVRFNLLRREIKGISQKVLSQTLKKLERDGLISRQAFPTVPVTV
EYSLTPLGRTLTETVAALAHWAEGNIEAVMAAQRAYDERVAA
>Mature_122_residues
MEHIYDVYEDRCPTRMVLDRIADKWALLILDKLRVDAVRFNLLRREIKGISQKVLSQTLKKLERDGLISRQAFPTVPVTV
EYSLTPLGRTLTETVAALAHWAEGNIEAVMAAQRAYDERVAA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=116, Percent_Identity=48.2758620689655, Blast_Score=115, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13924; Mature: 13924

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHIYDVYEDRCPTRMVLDRIADKWALLILDKLRVDAVRFNLLRREIKGISQKVLSQTLK
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLERDGLISRQAFPTVPVTVEYSLTPLGRTLTETVAALAHWAEGNIEAVMAAQRAYDERV
HHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
AA
CC
>Mature Secondary Structure
MEHIYDVYEDRCPTRMVLDRIADKWALLILDKLRVDAVRFNLLRREIKGISQKVLSQTLK
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLERDGLISRQAFPTVPVTVEYSLTPLGRTLTETVAALAHWAEGNIEAVMAAQRAYDERV
HHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
AA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]