Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184488
Identifier: 159184488
GI number: 159184488
Start: 836239
End: 836754
Strand: Reverse
Name: 159184488
Synonym: Atu0837
Alternate gene names: NA
Gene position: 836754-836239 (Counterclockwise)
Preceding gene: 159184492
Following gene: 15888177
Centisome position: 29.45
GC content: 60.47
Gene sequence:
>516_bases GTGGCGAGCGAGGAAGACTGGAACGAGGATTTGCCCGAGGACATCAAGCGGATCGGCAATACGATGACGCGTATGCGCAT CATGATCGGCCGCCGCATCATCGGCCGAATGGCGCTTGCCAAGCTCGCTCCGGGTCTTGAACTCTCCCATATCGATGTGC TCGATATTCTGCGCCGTGCCGAAGGCGACGTCACCGTGGGTGCGATTGCCGAGGGCATGCGCATTGACCCTTCGCGCGGC AGCCGGGTCGTCGCGGATATGGTCGGGCGCGGCCTGTTGAAACGTGGCGTGTCGCAGGAAGATGGCCGCCGCAGCATCGT CGAAATCACGCCGCTCGGTACCAGCCTTTTGCAGGAAATGCGCCGGACCAAGATGAGCGTCATTGAGGATGTGATGGATG GCTGGCCGGCAGAGGATGTGGAGACATTCGGCCGCCTGTTCGAGCGCTTCATCGACCGTTTTGAAAACCGGCTTTCGCCG GATGCGGACGTGCTCACGGATCAGAAAAAATCATAG
Upstream 100 bases:
>100_bases TGTGTGCTATTGGCATATATATGTCAATGGCAAGTTTTTGACATCTGTGCTATCAGCGCTAAATGTGATCGGAAACCGGC ATCGAAAGGAACGGCTGAGA
Downstream 100 bases:
>100_bases TTACCCCTGACATCCACAACTTCACTTTACAACGACGAGACCGTAACGTGCCGGCGATCGAACAGGTTTCAAGGGGTAAT TTCGATGTTGACGATTTACG
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; MarR-Family Transcriptional Regulator; MarR-Family Regulator; Transcriptional Regulator Protein MarR Family; Transcriptional Regulator Protein; Transcriptional Regulator MarR Family; Transcriptional Regulator Marr Family
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MASEEDWNEDLPEDIKRIGNTMTRMRIMIGRRIIGRMALAKLAPGLELSHIDVLDILRRAEGDVTVGAIAEGMRIDPSRG SRVVADMVGRGLLKRGVSQEDGRRSIVEITPLGTSLLQEMRRTKMSVIEDVMDGWPAEDVETFGRLFERFIDRFENRLSP DADVLTDQKKS
Sequences:
>Translated_171_residues MASEEDWNEDLPEDIKRIGNTMTRMRIMIGRRIIGRMALAKLAPGLELSHIDVLDILRRAEGDVTVGAIAEGMRIDPSRG SRVVADMVGRGLLKRGVSQEDGRRSIVEITPLGTSLLQEMRRTKMSVIEDVMDGWPAEDVETFGRLFERFIDRFENRLSP DADVLTDQKKS >Mature_170_residues ASEEDWNEDLPEDIKRIGNTMTRMRIMIGRRIIGRMALAKLAPGLELSHIDVLDILRRAEGDVTVGAIAEGMRIDPSRGS RVVADMVGRGLLKRGVSQEDGRRSIVEITPLGTSLLQEMRRTKMSVIEDVMDGWPAEDVETFGRLFERFIDRFENRLSPD ADVLTDQKKS
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19283; Mature: 19151
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASEEDWNEDLPEDIKRIGNTMTRMRIMIGRRIIGRMALAKLAPGLELSHIDVLDILRRA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC EGDVTVGAIAEGMRIDPSRGSRVVADMVGRGLLKRGVSQEDGRRSIVEITPLGTSLLQEM CCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHH RRTKMSVIEDVMDGWPAEDVETFGRLFERFIDRFENRLSPDADVLTDQKKS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCC >Mature Secondary Structure ASEEDWNEDLPEDIKRIGNTMTRMRIMIGRRIIGRMALAKLAPGLELSHIDVLDILRRA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC EGDVTVGAIAEGMRIDPSRGSRVVADMVGRGLLKRGVSQEDGRRSIVEITPLGTSLLQEM CCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHH RRTKMSVIEDVMDGWPAEDVETFGRLFERFIDRFENRLSPDADVLTDQKKS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA