| Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
|---|---|
| Accession | NC_003062 |
| Length | 2,841,580 |
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The map label for this gene is fabG [H]
Identifier: 159184426
GI number: 159184426
Start: 705153
End: 705926
Strand: Reverse
Name: fabG [H]
Synonym: Atu0705
Alternate gene names: 159184426
Gene position: 705926-705153 (Counterclockwise)
Preceding gene: 159184435
Following gene: 159184425
Centisome position: 24.84
GC content: 60.47
Gene sequence:
>774_bases ATGACGCCAATGATGCAAGCCCAATTTCCAGACCTCAAGGATGCGGGCGTGCTCGTTACCGGCGGCGGTTCGGGCATCGG GGCATCGCTGGTCGAAGCCTTCGCGATGCAGGGGGCGAAGGTTTCGTTCATCGACATCGCCGAACAGCCGAGCATAGCGC TTGTCGAGCGGCTTGCGGCGACGGTGCCTCACCCGGTCCATTATTTCAGGGCCGACCTCAGTGATATCGACGCGATCAAG CGTACGGTGGATATGGCCGCCTCCGCCACCGGCGGCATCAAGGTGCTGGTCAACAATGCCGCCTGGGACGACCGTCACGA CATCGACAGCGTCACAGAGGCCTATTGGGACGCCAACCAGGCGGTCAATCTCAAGCAGATGTTCTTCACGGTTCAGGCTG CCCTTCCCCATCTGCGACAGGCGAAGGATGCCTCGATCGTCAATTTTTCGTCTATCTCGTTTTTGCTGAACATGGGCGAG TTGCCTTCCTATGCAGCGGCGAAAGCCGGCATTATCGGTCTCACCAAGAGCCTTGCCGGCAGGCTGGGGCCGGAAAATAT CCGCGTCAACACGCTCCTGCCGGGCATGATCGTGACGGAGCGGCAGAAGGAACTGTGGCTGACGGATGAGGGCATTACGG CCACCACGGCGCGGCAGTGCCTGAAGCGCACGCTCGTCGCTGCCGATCTTTCCGGGCCGTGCCTGTTTCTCGCATCATCG GCATCGAGCGCCATCACGGCGCAATCCATTATCGTAGACGGAGGCCTGTTATAA
Upstream 100 bases:
>100_bases ACCGTCATCGGTCTTGACATCATCGAGACGCCAAGAGAATAATTCCACTTAGTAAAATTTAGTTCCAAATAATGGAACAA TCAAGCCTTTCATGAACGAG
Downstream 100 bases:
>100_bases TGTCCGAACCCGCTTTCATCGCCGTTGACTGGGGCACGACCAGTTTCCGGCTCTGGCTTCTCAGCCGATCGGGCGCGGTG CTTGCCGAACGGCGCAGCGC
Product: 3-oxoacyl-(acyl carrier protein) reductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTPMMQAQFPDLKDAGVLVTGGGSGIGASLVEAFAMQGAKVSFIDIAEQPSIALVERLAATVPHPVHYFRADLSDIDAIK RTVDMAASATGGIKVLVNNAAWDDRHDIDSVTEAYWDANQAVNLKQMFFTVQAALPHLRQAKDASIVNFSSISFLLNMGE LPSYAAAKAGIIGLTKSLAGRLGPENIRVNTLLPGMIVTERQKELWLTDEGITATTARQCLKRTLVAADLSGPCLFLASS ASSAITAQSIIVDGGLL
Sequences:
>Translated_257_residues MTPMMQAQFPDLKDAGVLVTGGGSGIGASLVEAFAMQGAKVSFIDIAEQPSIALVERLAATVPHPVHYFRADLSDIDAIK RTVDMAASATGGIKVLVNNAAWDDRHDIDSVTEAYWDANQAVNLKQMFFTVQAALPHLRQAKDASIVNFSSISFLLNMGE LPSYAAAKAGIIGLTKSLAGRLGPENIRVNTLLPGMIVTERQKELWLTDEGITATTARQCLKRTLVAADLSGPCLFLASS ASSAITAQSIIVDGGLL >Mature_256_residues TPMMQAQFPDLKDAGVLVTGGGSGIGASLVEAFAMQGAKVSFIDIAEQPSIALVERLAATVPHPVHYFRADLSDIDAIKR TVDMAASATGGIKVLVNNAAWDDRHDIDSVTEAYWDANQAVNLKQMFFTVQAALPHLRQAKDASIVNFSSISFLLNMGEL PSYAAAKAGIIGLTKSLAGRLGPENIRVNTLLPGMIVTERQKELWLTDEGITATTARQCLKRTLVAADLSGPCLFLASSA SSAITAQSIIVDGGLL
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=243, Percent_Identity=31.6872427983539, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI66933014, Length=229, Percent_Identity=29.6943231441048, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI15277342, Length=256, Percent_Identity=35.546875, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI31542939, Length=191, Percent_Identity=28.7958115183246, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI126723750, Length=143, Percent_Identity=30.0699300699301, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI19923817, Length=248, Percent_Identity=27.4193548387097, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI7705925, Length=241, Percent_Identity=29.4605809128631, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI4504505, Length=188, Percent_Identity=32.4468085106383, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI10190704, Length=250, Percent_Identity=27.2, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI224922801, Length=169, Percent_Identity=28.4023668639053, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI5031737, Length=241, Percent_Identity=27.3858921161826, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI59889578, Length=234, Percent_Identity=28.6324786324786, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1789208, Length=241, Percent_Identity=33.195020746888, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1790717, Length=257, Percent_Identity=32.6848249027237, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI1789378, Length=253, Percent_Identity=33.201581027668, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI1787335, Length=239, Percent_Identity=28.0334728033473, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI87082100, Length=249, Percent_Identity=29.718875502008, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI87082160, Length=253, Percent_Identity=28.4584980237154, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1786812, Length=253, Percent_Identity=27.2727272727273, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1787905, Length=238, Percent_Identity=27.7310924369748, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789057, Length=253, Percent_Identity=28.4584980237154, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17555706, Length=244, Percent_Identity=34.0163934426229, Blast_Score=100, Evalue=6e-22, Organism=Caenorhabditis elegans, GI25147288, Length=246, Percent_Identity=32.9268292682927, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17560676, Length=259, Percent_Identity=28.957528957529, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17561402, Length=245, Percent_Identity=29.7959183673469, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI115534694, Length=254, Percent_Identity=28.740157480315, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI193203115, Length=180, Percent_Identity=30.5555555555556, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17544670, Length=264, Percent_Identity=28.030303030303, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17562910, Length=264, Percent_Identity=30.3030303030303, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI193203117, Length=185, Percent_Identity=29.7297297297297, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI72000259, Length=258, Percent_Identity=31.0077519379845, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=29.3172690763052, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17559104, Length=253, Percent_Identity=30.0395256916996, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17567345, Length=200, Percent_Identity=28, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=28.9156626506024, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17563726, Length=260, Percent_Identity=25.7692307692308, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17560332, Length=259, Percent_Identity=29.3436293436293, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17568967, Length=183, Percent_Identity=29.5081967213115, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17531453, Length=266, Percent_Identity=30.4511278195489, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=252, Percent_Identity=25.7936507936508, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=202, Percent_Identity=28.7128712871287, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24643142, Length=245, Percent_Identity=33.8775510204082, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI21355319, Length=242, Percent_Identity=32.6446280991736, Blast_Score=103, Evalue=8e-23, Organism=Drosophila melanogaster, GI21357041, Length=251, Percent_Identity=27.4900398406374, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=30.5220883534137, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI281364892, Length=190, Percent_Identity=32.1052631578947, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI28571526, Length=249, Percent_Identity=28.9156626506024, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24639444, Length=243, Percent_Identity=30.4526748971193, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI24644337, Length=252, Percent_Identity=31.3492063492063, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI18859837, Length=185, Percent_Identity=30.2702702702703, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24644339, Length=251, Percent_Identity=27.0916334661355, Blast_Score=68, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27199; Mature: 27067
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPMMQAQFPDLKDAGVLVTGGGSGIGASLVEAFAMQGAKVSFIDIAEQPSIALVERLAA CCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH TVPHPVHYFRADLSDIDAIKRTVDMAASATGGIKVLVNNAAWDDRHDIDSVTEAYWDANQ HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCC AVNLKQMFFTVQAALPHLRQAKDASIVNFSSISFLLNMGELPSYAAAKAGIIGLTKSLAG CCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH RLGPENIRVNTLLPGMIVTERQKELWLTDEGITATTARQCLKRTLVAADLSGPCLFLASS CCCCCCEEEEEECCCCEEECCCHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC ASSAITAQSIIVDGGLL CCCHHHHHHEEECCCCC >Mature Secondary Structure TPMMQAQFPDLKDAGVLVTGGGSGIGASLVEAFAMQGAKVSFIDIAEQPSIALVERLAA CCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH TVPHPVHYFRADLSDIDAIKRTVDMAASATGGIKVLVNNAAWDDRHDIDSVTEAYWDANQ HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCC AVNLKQMFFTVQAALPHLRQAKDASIVNFSSISFLLNMGELPSYAAAKAGIIGLTKSLAG CCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH RLGPENIRVNTLLPGMIVTERQKELWLTDEGITATTARQCLKRTLVAADLSGPCLFLASS CCCCCCEEEEEECCCCEEECCCHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC ASSAITAQSIIVDGGLL CCCHHHHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]