Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 159184418

Identifier: 159184418

GI number: 159184418

Start: 675290

End: 675724

Strand: Reverse

Name: 159184418

Synonym: Atu0681

Alternate gene names: NA

Gene position: 675724-675290 (Counterclockwise)

Preceding gene: 159185413

Following gene: 15888023

Centisome position: 23.78

GC content: 58.85

Gene sequence:

>435_bases
ATGCGGGGGCGCGATTTGTTTGAAATATCAAGACGCAACGATGCTCTGCCGGCGGCGGTGACGACCACGCCCGATCCCCG
CACCCTGTCTCATTTCTTCATTTCGGAGGAATGGAGCAGCGAACTTTCCAGCGGTGTCATCCGGCTCGGCGAACACACTT
CCTTCATGCACGGCCTGCCACCGGGCGAATGTGGGCTGCTCAGCCTTGTCCGCTGTTACGACCGTGGTGACCATGCCCGC
GTGCTGGAGCTTTTCGAGCAGGTCTCTACCGAACCCTCACGGTTCTGTTTCTCGACAAGCGTCTCCATCTTGCCGGCGAT
GCGGCAACCGGTCATCTGCATGGGTGAATCGTCCGGTTTTGAAGATGGGCAGCAGGGGCGTATATCCGGGCTTTTCCTGT
TCCCGCGTTTCGAAGATATTCGCTTCGCCGCCTAA

Upstream 100 bases:

>100_bases
ATTGAAGGGGTTCGATGCTGGGCAAACACGTTCGACTGCGGATGGCGGTAAAGGTTAAACCTGGCAGGGTCGCTAGAAAT
GGTGGCACTGGCATGTGTTC

Downstream 100 bases:

>100_bases
GATTACGCACCGACACTCGCTTATCGTTCACAAAATGAAGACAATTTGTCGTCTGCCGTTCATCTTTCTGGATTAGTGAT
TTTCAGCCATTAGTATCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MRGRDLFEISRRNDALPAAVTTTPDPRTLSHFFISEEWSSELSSGVIRLGEHTSFMHGLPPGECGLLSLVRCYDRGDHAR
VLELFEQVSTEPSRFCFSTSVSILPAMRQPVICMGESSGFEDGQQGRISGLFLFPRFEDIRFAA

Sequences:

>Translated_144_residues
MRGRDLFEISRRNDALPAAVTTTPDPRTLSHFFISEEWSSELSSGVIRLGEHTSFMHGLPPGECGLLSLVRCYDRGDHAR
VLELFEQVSTEPSRFCFSTSVSILPAMRQPVICMGESSGFEDGQQGRISGLFLFPRFEDIRFAA
>Mature_144_residues
MRGRDLFEISRRNDALPAAVTTTPDPRTLSHFFISEEWSSELSSGVIRLGEHTSFMHGLPPGECGLLSLVRCYDRGDHAR
VLELFEQVSTEPSRFCFSTSVSILPAMRQPVICMGESSGFEDGQQGRISGLFLFPRFEDIRFAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16102; Mature: 16102

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGRDLFEISRRNDALPAAVTTTPDPRTLSHFFISEEWSSELSSGVIRLGEHTSFMHGLP
CCCCCCCEECCCCCCCCEEEECCCCCCHHHHHHHCHHHHHHHHHCEEECCCCCHHHCCCC
PGECGLLSLVRCYDRGDHARVLELFEQVSTEPSRFCFSTSVSILPAMRQPVICMGESSGF
CCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHEEHHHCHHHHHHCCCCEEEEECCCCC
EDGQQGRISGLFLFPRFEDIRFAA
CCCCCCCEEEEEECCCCCCCEECC
>Mature Secondary Structure
MRGRDLFEISRRNDALPAAVTTTPDPRTLSHFFISEEWSSELSSGVIRLGEHTSFMHGLP
CCCCCCCEECCCCCCCCEEEECCCCCCHHHHHHHCHHHHHHHHHCEEECCCCCHHHCCCC
PGECGLLSLVRCYDRGDHARVLELFEQVSTEPSRFCFSTSVSILPAMRQPVICMGESSGF
CCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHEEHHHCHHHHHHCCCCEEEEECCCCC
EDGQQGRISGLFLFPRFEDIRFAA
CCCCCCCEEEEEECCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA