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The map label for this gene is yhgF [C]

Identifier: 159184406

GI number: 159184406

Start: 638958

End: 641282

Strand: Direct

Name: yhgF [C]

Synonym: Atu0648

Alternate gene names: 159184406

Gene position: 638958-641282 (Clockwise)

Preceding gene: 159184403

Following gene: 15887991

Centisome position: 22.49

GC content: 63.1

Gene sequence:

>2325_bases
ATGACCGCAGACAATGCCCGCCTCGCCTCGCTCATAGCCTCCGAAATCAATGCCCGCCCCGATCAGGTAAAGGCGGCGGT
GGCCTTGCTGGACGAGGGCGCGACCGTGCCCTTCATCGCCCGCTACCGCAAGGAAGTGACCGGCGGTCTCGATGACACCC
AGCTTCGAACGCTGGCGGAACGCCTCGTCTATCTGCGCGAACTCAATGCGCGCCGCGCCTCCATCGTCGATTCCATCACC
GGCCAAGGCAAGATGACCGACGAGTTGATGGTCAAGATCATGCAGGCGGGCACCAAGGCTGAGCTGGAAGACCTCTATCT
GCCCTATAAGCCGAAGCGCCGCACCCGCGCGGAAATCGCCCGCGAACGCGGTCTCGGCCCGCTCGCCGAAGCCATCTGGG
AAAACCGCGCTGCCGATCCGGCGAAACTGGCGGAGGCCTATGTCAAGGGTGAGGTGGCCGATGTGAAGGCGGCGCTCGAG
GGCGCGCGCGACATCGTTGCCGAGACCATGACGGAAAACGCCGATCTTCTCGGCCGCCTGCGTGATTACATGCGCCGGAA
CGCCACCTTTCGCGCCAAGGTCGTGGATGGCAAACAGGCGACGGGCGAGAAGTTTTCCGATTATTTCGACCATTCCGAGC
GCTGGGCAACGGTGCCGGGCCACCGGGCGCTCGCCATGCTGCGCGGCTGGAACGAGGAAGTGCTGACATTGACGATCGAT
GTCGATGCGGATGATCCCTCGCCGGTGAAGCCGTCGCAGCGCACCATTGCTGCCGCTTTCGATATCCGCAGCGCCGGACC
TGCCGATCAGTGGCTGATGGAGGTGGCGGGCTGGACCTGGCGCGTTAAGCTTTCCATGTCGCTGTCGCTCGATCTGATGC
GCGAGTTGCGCGAGCGGGCGGAAGAAGAGGCGATCAATGTCTTTGCCCGCAATCTGAAGGATCTGCTGCTGGCCGCCCCC
GCCGGATCCCGCGCCACCATGGGTCTCGACCCCGGCATCCGCACCGGCGTGAAGGTCGCGATCGTGGATGGTACCGGCAA
GCTGCTGGATACCAGCACGGTCTATCCCTTCCCGCCCAAGAACGATGTTCGCGGCACGCAGGCCGAACTCGCCTCGCTGA
TCCGCAAACACAATGTCGAACTCATCGCCATCGGCAACGGCACGGGCAGCCGTGAAACCGAAAAGCTGGTGGCCGATCTT
CTGGCCCAGCTGCCGGCTTCCGCTTCCGGCGCAAAGCCCACCAAGGTTATCGTCTCGGAAGCCGGCGCATCCGTCTATTC
CGCTTCGGAACGGGCAGCAGCCGAATTCCCCAATCTCGATGTTTCCTTGCGCGGCGCCGTCTCCATCGCCCGGCGTCTTC
AGGACCCGTTGGCGGAACTGGTGAAGATCGAGCCGAAATCCATCGGCGTCGGACAATATCAGCACGATGTCGATCAGGGC
CGCCTCAGCCGCTCGCTTGATGCCGTGGTGGAAGATGCGGTGAATGCCGTCGGCGTCGATCTCAACACGGCATCGTCGCC
GCTTCTGGCGAGGGTCTCCGGTCTTGGCAGCTCCATTGCCGATGCCATCGTTGCCCATCGTGACCAGACCGGCCCTTTCG
CAAGCCGCAAGGAATTGCTGAAAGTGCCGCGGCTTGGCCAGCGCACCTTCGAACAATGCGCCGGCTTCCTGCGTATTCCG
AACGGCAAGGAACCACTGGATTCCTCTTCGGTGCACCCGGAAGCCTATGGCGTTGCAAAGAAGATCGTGGCCGCCTGCGG
CCGTGATCTGCGTTCGCTGATGGGGGATAGCGCCGCGCTGAAAGCGCTTGACCCCAAGCGCTTCATCGACGAGCAGTTCG
GCCTGCCGACCGTCAAAGACATCATCGCCGAACTGGAAAAACCCGGTCGCGACCCGCGCCCGAGCTTCAAGACCGCGACC
TTTGCAGATGGTGTGGATGAGATCACCGATCTGAAACCTGGCATGCTTCTGGAGGGCACCGTCACCAATGTCGCCGCTTT
CGGCGCTTTCGTGGATATCGGCGTGCATCAGGATGGCCTCGTGCATGTCTCGCAGCTCGCCGACCGTTTCGTGAAGGACC
CGCATGAGGTCGTCAAGGCGGGCGACGTCGTCAAGGTGCGAGTCGTGGAAGTGGATGTGAAGCGTAAGCGCATCGGGCTG
ACCATGCGTAAGGATGGCGGTGAGGCAGTGCCGCAGCCGATGCGTGAAAAGAACAATGCGGGCGCCATGCGCCACGCGAC
AGCCAAGCCGAAAGAACGCAACGAGGGGTCGCAATCCGGTGGTGCTCTCGCCGCCGCTTTGGCCGAAGCCATGAAGCGAC
GCTGA

Upstream 100 bases:

>100_bases
CTTGAACTCAGCCTTTCCTGTGGAATCGTGGATACCTCTTGTTGTCACGCCACAATCAGACATTATGTTCGCCGCTCCAG
ACGCCACAGCAGAGAACCCC

Downstream 100 bases:

>100_bases
CCTCTGGTTGAATTGTTTTTTGACCAAAAAGCCCCGCCGGACACGCCGGCGGGGCTTTTTGCTTGATGAAATCGTTCAAT
TTTTTTGAAATAAGACTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 774; Mature: 773

Protein sequence:

>774_residues
MTADNARLASLIASEINARPDQVKAAVALLDEGATVPFIARYRKEVTGGLDDTQLRTLAERLVYLRELNARRASIVDSIT
GQGKMTDELMVKIMQAGTKAELEDLYLPYKPKRRTRAEIARERGLGPLAEAIWENRAADPAKLAEAYVKGEVADVKAALE
GARDIVAETMTENADLLGRLRDYMRRNATFRAKVVDGKQATGEKFSDYFDHSERWATVPGHRALAMLRGWNEEVLTLTID
VDADDPSPVKPSQRTIAAAFDIRSAGPADQWLMEVAGWTWRVKLSMSLSLDLMRELRERAEEEAINVFARNLKDLLLAAP
AGSRATMGLDPGIRTGVKVAIVDGTGKLLDTSTVYPFPPKNDVRGTQAELASLIRKHNVELIAIGNGTGSRETEKLVADL
LAQLPASASGAKPTKVIVSEAGASVYSASERAAAEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQG
RLSRSLDAVVEDAVNAVGVDLNTASSPLLARVSGLGSSIADAIVAHRDQTGPFASRKELLKVPRLGQRTFEQCAGFLRIP
NGKEPLDSSSVHPEAYGVAKKIVAACGRDLRSLMGDSAALKALDPKRFIDEQFGLPTVKDIIAELEKPGRDPRPSFKTAT
FADGVDEITDLKPGMLLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKVRVVEVDVKRKRIGL
TMRKDGGEAVPQPMREKNNAGAMRHATAKPKERNEGSQSGGALAAALAEAMKRR

Sequences:

>Translated_774_residues
MTADNARLASLIASEINARPDQVKAAVALLDEGATVPFIARYRKEVTGGLDDTQLRTLAERLVYLRELNARRASIVDSIT
GQGKMTDELMVKIMQAGTKAELEDLYLPYKPKRRTRAEIARERGLGPLAEAIWENRAADPAKLAEAYVKGEVADVKAALE
GARDIVAETMTENADLLGRLRDYMRRNATFRAKVVDGKQATGEKFSDYFDHSERWATVPGHRALAMLRGWNEEVLTLTID
VDADDPSPVKPSQRTIAAAFDIRSAGPADQWLMEVAGWTWRVKLSMSLSLDLMRELRERAEEEAINVFARNLKDLLLAAP
AGSRATMGLDPGIRTGVKVAIVDGTGKLLDTSTVYPFPPKNDVRGTQAELASLIRKHNVELIAIGNGTGSRETEKLVADL
LAQLPASASGAKPTKVIVSEAGASVYSASERAAAEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQG
RLSRSLDAVVEDAVNAVGVDLNTASSPLLARVSGLGSSIADAIVAHRDQTGPFASRKELLKVPRLGQRTFEQCAGFLRIP
NGKEPLDSSSVHPEAYGVAKKIVAACGRDLRSLMGDSAALKALDPKRFIDEQFGLPTVKDIIAELEKPGRDPRPSFKTAT
FADGVDEITDLKPGMLLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKVRVVEVDVKRKRIGL
TMRKDGGEAVPQPMREKNNAGAMRHATAKPKERNEGSQSGGALAAALAEAMKRR
>Mature_773_residues
TADNARLASLIASEINARPDQVKAAVALLDEGATVPFIARYRKEVTGGLDDTQLRTLAERLVYLRELNARRASIVDSITG
QGKMTDELMVKIMQAGTKAELEDLYLPYKPKRRTRAEIARERGLGPLAEAIWENRAADPAKLAEAYVKGEVADVKAALEG
ARDIVAETMTENADLLGRLRDYMRRNATFRAKVVDGKQATGEKFSDYFDHSERWATVPGHRALAMLRGWNEEVLTLTIDV
DADDPSPVKPSQRTIAAAFDIRSAGPADQWLMEVAGWTWRVKLSMSLSLDLMRELRERAEEEAINVFARNLKDLLLAAPA
GSRATMGLDPGIRTGVKVAIVDGTGKLLDTSTVYPFPPKNDVRGTQAELASLIRKHNVELIAIGNGTGSRETEKLVADLL
AQLPASASGAKPTKVIVSEAGASVYSASERAAAEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQGR
LSRSLDAVVEDAVNAVGVDLNTASSPLLARVSGLGSSIADAIVAHRDQTGPFASRKELLKVPRLGQRTFEQCAGFLRIPN
GKEPLDSSSVHPEAYGVAKKIVAACGRDLRSLMGDSAALKALDPKRFIDEQFGLPTVKDIIAELEKPGRDPRPSFKTATF
ADGVDEITDLKPGMLLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKVRVVEVDVKRKRIGLT
MRKDGGEAVPQPMREKNNAGAMRHATAKPKERNEGSQSGGALAAALAEAMKRR

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=798, Percent_Identity=31.9548872180451, Blast_Score=354, Evalue=2e-97,
Organism=Homo sapiens, GI27597090, Length=730, Percent_Identity=23.4246575342466, Blast_Score=110, Evalue=3e-24,
Organism=Escherichia coli, GI87082262, Length=747, Percent_Identity=61.3119143239625, Blast_Score=883, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=79, Percent_Identity=39.2405063291139, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17511129, Length=712, Percent_Identity=30.0561797752809, Blast_Score=270, Evalue=2e-72,
Organism=Caenorhabditis elegans, GI17552892, Length=286, Percent_Identity=31.4685314685315, Blast_Score=89, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6321552, Length=188, Percent_Identity=30.8510638297872, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI62484314, Length=778, Percent_Identity=32.133676092545, Blast_Score=367, Evalue=1e-101,
Organism=Drosophila melanogaster, GI24640080, Length=587, Percent_Identity=22.1465076660988, Blast_Score=85, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 83672; Mature: 83541

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTADNARLASLIASEINARPDQVKAAVALLDEGATVPFIARYRKEVTGGLDDTQLRTLAE
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
RLVYLRELNARRASIVDSITGQGKMTDELMVKIMQAGTKAELEDLYLPYKPKRRTRAEIA
HHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHH
RERGLGPLAEAIWENRAADPAKLAEAYVKGEVADVKAALEGARDIVAETMTENADLLGRL
HHHCCCHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RDYMRRNATFRAKVVDGKQATGEKFSDYFDHSERWATVPGHRALAMLRGWNEEVLTLTID
HHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCEECCCCHHHHHHHHCCCCEEEEEEEE
VDADDPSPVKPSQRTIAAAFDIRSAGPADQWLMEVAGWTWRVKLSMSLSLDLMRELRERA
ECCCCCCCCCCCCHHEEHHHCCCCCCCHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHH
EEEAINVFARNLKDLLLAAPAGSRATMGLDPGIRTGVKVAIVDGTGKLLDTSTVYPFPPK
HHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCC
NDVRGTQAELASLIRKHNVELIAIGNGTGSRETEKLVADLLAQLPASASGAKPTKVIVSE
CCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEHHHH
AGASVYSASERAAAEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQG
CCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
RLSRSLDAVVEDAVNAVGVDLNTASSPLLARVSGLGSSIADAIVAHRDQTGPFASRKELL
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHH
KVPRLGQRTFEQCAGFLRIPNGKEPLDSSSVHPEAYGVAKKIVAACGRDLRSLMGDSAAL
HCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
KALDPKRFIDEQFGLPTVKDIIAELEKPGRDPRPSFKTATFADGVDEITDLKPGMLLEGT
HHCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHCCCCCEEECCH
VTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKVRVVEVDVKRKRIGL
HHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCHHHHHHCCCEEEEEEEEEEHHHHHHCE
TMRKDGGEAVPQPMREKNNAGAMRHATAKPKERNEGSQSGGALAAALAEAMKRR
EEECCCCCCCCCHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TADNARLASLIASEINARPDQVKAAVALLDEGATVPFIARYRKEVTGGLDDTQLRTLAE
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
RLVYLRELNARRASIVDSITGQGKMTDELMVKIMQAGTKAELEDLYLPYKPKRRTRAEIA
HHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHH
RERGLGPLAEAIWENRAADPAKLAEAYVKGEVADVKAALEGARDIVAETMTENADLLGRL
HHHCCCHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RDYMRRNATFRAKVVDGKQATGEKFSDYFDHSERWATVPGHRALAMLRGWNEEVLTLTID
HHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCEECCCCHHHHHHHHCCCCEEEEEEEE
VDADDPSPVKPSQRTIAAAFDIRSAGPADQWLMEVAGWTWRVKLSMSLSLDLMRELRERA
ECCCCCCCCCCCCHHEEHHHCCCCCCCHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHH
EEEAINVFARNLKDLLLAAPAGSRATMGLDPGIRTGVKVAIVDGTGKLLDTSTVYPFPPK
HHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCC
NDVRGTQAELASLIRKHNVELIAIGNGTGSRETEKLVADLLAQLPASASGAKPTKVIVSE
CCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEHHHH
AGASVYSASERAAAEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQG
CCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
RLSRSLDAVVEDAVNAVGVDLNTASSPLLARVSGLGSSIADAIVAHRDQTGPFASRKELL
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHH
KVPRLGQRTFEQCAGFLRIPNGKEPLDSSSVHPEAYGVAKKIVAACGRDLRSLMGDSAAL
HCCCCCHHHHHHHHCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
KALDPKRFIDEQFGLPTVKDIIAELEKPGRDPRPSFKTATFADGVDEITDLKPGMLLEGT
HHCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHCCCCCEEECCH
VTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKVRVVEVDVKRKRIGL
HHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCHHHHHHCCCEEEEEEEEEEHHHHHHCE
TMRKDGGEAVPQPMREKNNAGAMRHATAKPKERNEGSQSGGALAAALAEAMKRR
EEECCCCCCCCCHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]