Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is zwf [H]
Identifier: 159184383
GI number: 159184383
Start: 585849
End: 587324
Strand: Reverse
Name: zwf [H]
Synonym: Atu0600
Alternate gene names: 159184383
Gene position: 587324-585849 (Counterclockwise)
Preceding gene: 15887946
Following gene: 159184382
Centisome position: 20.67
GC content: 60.3
Gene sequence:
>1476_bases ATGAGCAGTCAGATCATTCCTGTTGAACCTTTTGATTGTGTCGTTTTCGGCGGCACGGGCGATCTTGCCGAGCGCAAGCT TCTGCCGGCCCTTTATCACCGGCAGGTCGAAGGCCAGTTCACGGAGCCGACCCGCATCATCGGCGCGTCGCGTTCGGTCA TGACCCATGAGGAATATCGCAAATTCGCGCAGGACGCCCTGAAGGAACACCTGAAGGCCGGCGAATATGACGATGCGCAG GTGACCCTGTTCCTCAACCGGCTTTTCTACGTGCCCGTCGATGCCAAGTCCGGCAATGGCTGGGACGTGCTGAAGAAACT GCTCGATGAGGGCAAGGAACGCATCCGCGCGTTTTATCTGGCCGTCGCACCCGGCATTTTCGGCGACATCGCCGACAAGA TCCGTGAGCACAAGCTGATCACCCGCTCGACCCGCATCGTCGTTGAAAAGCCGATCGGCCGGGATCTCGCATCCGCGCAG GAACTGAACGACACCATCGGTCACGTCTTCAAGGAAGAGCAGATCTTCCGCATCGACCACTATCTCGGCAAGGAGACGGT GCAGAACCTGATGGCGCTGCGTTTCGCCAATGCGCTTTACGAGCCGCTGTGGAATTCCGCCCATATCGACCACGTTCAGA TCACCGTTGCCGAAGCGGTGGGTCTTGAAGGTCGCGCCGGTTATTACGACAAGGCCGGTGCGCTGCGCGACATGGTGCAG AACCACATTCTCCAGCTGCTTTGCCTCGTTGCCATGGAGCCGCCCGCTTCCATGAAATCGGAGGCAGTGCGCGACGAAAA GCTCAAGGTACTGCGCTCGCTGAAGCCAATCGATACCAGCAATGTCGAAAAGCTGACGGTACGCGGCCAGTACCGCGCCG GCGCTTCCGCAGGCGGCCCCGTCAAGGGTTATCTGGAAGAGCTGGAAGGCGGCGTTTCCAACACCGAAACCTTCGTCGCC ATCAAGGCTGAAATCGCCAACTGGCGCTGGGCCGGCGTTCCCTTCTACATCCGCACCGGCAAACGCCTCGCGACCCGTGT TTCGGAAATCGTCGTCACCTTCAAGCAGATCCCGCACTCGATCTTCGACGATGCGGCTGGCAAGATCGAAGCCAACAAGC TGGTCATTCGCCTGCAGCCGGATGAAGGCGTCAAGCAGTCGCTCCTCATCAAGGATCCCGGTCCAGGCGGCATGCGCCTG CGTCAGGTCTCGCTGGACATGAGCTTTGCCGAAGCCTTCAACGTGCGCAGCCCCGATGCCTATGAGCGGCTGTTGATGGA CACCATTCGTTCCAACCAGACATTGTTCATGCGCCGCGACGAGGTCGAGGCCGCGTGGGACTGGATCGACCCCATCTTGA AGAGCTGGGAAGAGCTGGGACAGAGCGTACAGGGTTACACTGCCGGCACCTGGGGCCCGAGCGGTTCGATCGCACTGATC GAGCGCGACGGCCGCACCTGGCACGATGCCGACTGA
Upstream 100 bases:
>100_bases TTGGCGGAAGCAAAACTCATAATTTCACATAACTGAGTCTGGCATTTTTAAATCGATTAGATTATTGATGCCCCAACCTT TGAAGATCGAGAGAATCGAT
Downstream 100 bases:
>100_bases GGGCCGGGCGATGAGCGAAACGATCCACGTCTTCGACACCGCCGCCGCGCTGGCCACCGCACTTGCGGCGGAGGTTGCCA AACGCCTTGATGCGGCGACC
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MSSQIIPVEPFDCVVFGGTGDLAERKLLPALYHRQVEGQFTEPTRIIGASRSVMTHEEYRKFAQDALKEHLKAGEYDDAQ VTLFLNRLFYVPVDAKSGNGWDVLKKLLDEGKERIRAFYLAVAPGIFGDIADKIREHKLITRSTRIVVEKPIGRDLASAQ ELNDTIGHVFKEEQIFRIDHYLGKETVQNLMALRFANALYEPLWNSAHIDHVQITVAEAVGLEGRAGYYDKAGALRDMVQ NHILQLLCLVAMEPPASMKSEAVRDEKLKVLRSLKPIDTSNVEKLTVRGQYRAGASAGGPVKGYLEELEGGVSNTETFVA IKAEIANWRWAGVPFYIRTGKRLATRVSEIVVTFKQIPHSIFDDAAGKIEANKLVIRLQPDEGVKQSLLIKDPGPGGMRL RQVSLDMSFAEAFNVRSPDAYERLLMDTIRSNQTLFMRRDEVEAAWDWIDPILKSWEELGQSVQGYTAGTWGPSGSIALI ERDGRTWHDAD
Sequences:
>Translated_491_residues MSSQIIPVEPFDCVVFGGTGDLAERKLLPALYHRQVEGQFTEPTRIIGASRSVMTHEEYRKFAQDALKEHLKAGEYDDAQ VTLFLNRLFYVPVDAKSGNGWDVLKKLLDEGKERIRAFYLAVAPGIFGDIADKIREHKLITRSTRIVVEKPIGRDLASAQ ELNDTIGHVFKEEQIFRIDHYLGKETVQNLMALRFANALYEPLWNSAHIDHVQITVAEAVGLEGRAGYYDKAGALRDMVQ NHILQLLCLVAMEPPASMKSEAVRDEKLKVLRSLKPIDTSNVEKLTVRGQYRAGASAGGPVKGYLEELEGGVSNTETFVA IKAEIANWRWAGVPFYIRTGKRLATRVSEIVVTFKQIPHSIFDDAAGKIEANKLVIRLQPDEGVKQSLLIKDPGPGGMRL RQVSLDMSFAEAFNVRSPDAYERLLMDTIRSNQTLFMRRDEVEAAWDWIDPILKSWEELGQSVQGYTAGTWGPSGSIALI ERDGRTWHDAD >Mature_490_residues SSQIIPVEPFDCVVFGGTGDLAERKLLPALYHRQVEGQFTEPTRIIGASRSVMTHEEYRKFAQDALKEHLKAGEYDDAQV TLFLNRLFYVPVDAKSGNGWDVLKKLLDEGKERIRAFYLAVAPGIFGDIADKIREHKLITRSTRIVVEKPIGRDLASAQE LNDTIGHVFKEEQIFRIDHYLGKETVQNLMALRFANALYEPLWNSAHIDHVQITVAEAVGLEGRAGYYDKAGALRDMVQN HILQLLCLVAMEPPASMKSEAVRDEKLKVLRSLKPIDTSNVEKLTVRGQYRAGASAGGPVKGYLEELEGGVSNTETFVAI KAEIANWRWAGVPFYIRTGKRLATRVSEIVVTFKQIPHSIFDDAAGKIEANKLVIRLQPDEGVKQSLLIKDPGPGGMRLR QVSLDMSFAEAFNVRSPDAYERLLMDTIRSNQTLFMRRDEVEAAWDWIDPILKSWEELGQSVQGYTAGTWGPSGSIALIE RDGRTWHDAD
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI108773793, Length=479, Percent_Identity=39.0396659707724, Blast_Score=313, Evalue=2e-85, Organism=Homo sapiens, GI109389365, Length=479, Percent_Identity=39.0396659707724, Blast_Score=313, Evalue=2e-85, Organism=Homo sapiens, GI52145310, Length=479, Percent_Identity=29.6450939457203, Blast_Score=176, Evalue=4e-44, Organism=Escherichia coli, GI1788158, Length=482, Percent_Identity=50.8298755186722, Blast_Score=480, Evalue=1e-137, Organism=Caenorhabditis elegans, GI17538218, Length=487, Percent_Identity=35.7289527720739, Blast_Score=310, Evalue=1e-84, Organism=Saccharomyces cerevisiae, GI6324088, Length=473, Percent_Identity=38.2663847780127, Blast_Score=303, Evalue=5e-83, Organism=Drosophila melanogaster, GI24643350, Length=476, Percent_Identity=35.9243697478992, Blast_Score=291, Evalue=8e-79, Organism=Drosophila melanogaster, GI24643352, Length=476, Percent_Identity=35.9243697478992, Blast_Score=291, Evalue=9e-79, Organism=Drosophila melanogaster, GI221513548, Length=498, Percent_Identity=29.718875502008, Blast_Score=203, Evalue=2e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 55052; Mature: 54920
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00069 G6P_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQIIPVEPFDCVVFGGTGDLAERKLLPALYHRQVEGQFTEPTRIIGASRSVMTHEEYR CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHH KFAQDALKEHLKAGEYDDAQVTLFLNRLFYVPVDAKSGNGWDVLKKLLDEGKERIRAFYL HHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH AVAPGIFGDIADKIREHKLITRSTRIVVEKPIGRDLASAQELNDTIGHVFKEEQIFRIDH HHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YLGKETVQNLMALRFANALYEPLWNSAHIDHVQITVAEAVGLEGRAGYYDKAGALRDMVQ HHCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHCCCCCCCCCHHHHHHHHHHH NHILQLLCLVAMEPPASMKSEAVRDEKLKVLRSLKPIDTSNVEKLTVRGQYRAGASAGGP HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCC VKGYLEELEGGVSNTETFVAIKAEIANWRWAGVPFYIRTGKRLATRVSEIVVTFKQIPHS HHHHHHHHCCCCCCCCEEEEEEEEECCEEECCCCEEEECCHHHHHHHHHHHHHHHHHCHH IFDDAAGKIEANKLVIRLQPDEGVKQSLLIKDPGPGGMRLRQVSLDMSFAEAFNVRSPDA HHHHCCCCEEECEEEEEECCCCCCCCEEEEECCCCCCCEEEEEECCHHHHHHHCCCCCHH YERLLMDTIRSNQTLFMRRDEVEAAWDWIDPILKSWEELGQSVQGYTAGTWGPSGSIALI HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE ERDGRTWHDAD ECCCCCCCCCC >Mature Secondary Structure SSQIIPVEPFDCVVFGGTGDLAERKLLPALYHRQVEGQFTEPTRIIGASRSVMTHEEYR CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHH KFAQDALKEHLKAGEYDDAQVTLFLNRLFYVPVDAKSGNGWDVLKKLLDEGKERIRAFYL HHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH AVAPGIFGDIADKIREHKLITRSTRIVVEKPIGRDLASAQELNDTIGHVFKEEQIFRIDH HHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YLGKETVQNLMALRFANALYEPLWNSAHIDHVQITVAEAVGLEGRAGYYDKAGALRDMVQ HHCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHCCCCCCCCCHHHHHHHHHHH NHILQLLCLVAMEPPASMKSEAVRDEKLKVLRSLKPIDTSNVEKLTVRGQYRAGASAGGP HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCC VKGYLEELEGGVSNTETFVAIKAEIANWRWAGVPFYIRTGKRLATRVSEIVVTFKQIPHS HHHHHHHHCCCCCCCCEEEEEEEEECCEEECCCCEEEECCHHHHHHHHHHHHHHHHHCHH IFDDAAGKIEANKLVIRLQPDEGVKQSLLIKDPGPGGMRLRQVSLDMSFAEAFNVRSPDA HHHHCCCCEEECEEEEEECCCCCCCCEEEEECCCCCCCEEEEEECCHHHHHHHCCCCCHH YERLLMDTIRSNQTLFMRRDEVEAAWDWIDPILKSWEELGQSVQGYTAGTWGPSGSIALI HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE ERDGRTWHDAD ECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10400573; 11481430 [H]