Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184366
Identifier: 159184366
GI number: 159184366
Start: 544782
End: 545417
Strand: Reverse
Name: 159184366
Synonym: Atu0559
Alternate gene names: NA
Gene position: 545417-544782 (Counterclockwise)
Preceding gene: 159184378
Following gene: 15887904
Centisome position: 19.19
GC content: 57.39
Gene sequence:
>636_bases ATGGCCGATACACGTCTTTACAATTACGCGCTGAAAGCCCACGGCCTGGAAGACATGGCCTATGCAAAAGCCTTCATCCG CAAGGTGTTGACGGAAGGGGCGAGCGATAAGAACGCCTTCGCCAACAAGCTCTCCGACAATCGTTATGCCGAGCTTGCAA AGTCGCTGGATTTCGCGGGCCTGGGTGCGGCGGCAACCGCGACCGAGGCGGCCAAATCAGGTGTCATCGGCAACTACGCC CGCCAGACGCTGGAACAGGAAGCGGGCGACGACAATAACGGCGTCCGGCTCGCCCTTTATTTCGAGCGCAAGGCACCGAC AATCAAATCCGGCCTCGATTTTCTGGCCGACGACGCGCTTGCGCAGGTCTTCCGCACAACGTTCAACCTGCCTGACGCAT TTGCTGCTGCTGATGTCGACAAGCAGGCCGCCCTCATCGAAAAGAGCATCAATATCAAGGATCTGCAGGATCCTGAAAAG GTCGGCAAGTTGCTCGAGCGTTTCACCATCATGTGGGAAATGCAAAACCCCTCGACGACCTACGATCCCCTGGCCGTTTT CGGCTCCTCCAGCGGCTACGGCATTTCCCCCGACCTGCTGATTTCCATCAACTCCCTGAAACTCGGAGGCAAATGA
Upstream 100 bases:
>100_bases CGGCAAATCGCTCGAGCGGGTCTCGAAGCAGCCAGACGTGGCACGCGAGACCGAATATTACCGTGAAAAGATCGGCAGCG TGAAATCCATCGACGATTTC
Downstream 100 bases:
>100_bases TATGCAATCCGGACTATATGTCGCCCTGTCCTCGCAGATCGCGCTGGAGCGCCGTCTCACCACCATTTCTGACAATATGG CGAATGTGAACACGGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MADTRLYNYALKAHGLEDMAYAKAFIRKVLTEGASDKNAFANKLSDNRYAELAKSLDFAGLGAAATATEAAKSGVIGNYA RQTLEQEAGDDNNGVRLALYFERKAPTIKSGLDFLADDALAQVFRTTFNLPDAFAAADVDKQAALIEKSINIKDLQDPEK VGKLLERFTIMWEMQNPSTTYDPLAVFGSSSGYGISPDLLISINSLKLGGK
Sequences:
>Translated_211_residues MADTRLYNYALKAHGLEDMAYAKAFIRKVLTEGASDKNAFANKLSDNRYAELAKSLDFAGLGAAATATEAAKSGVIGNYA RQTLEQEAGDDNNGVRLALYFERKAPTIKSGLDFLADDALAQVFRTTFNLPDAFAAADVDKQAALIEKSINIKDLQDPEK VGKLLERFTIMWEMQNPSTTYDPLAVFGSSSGYGISPDLLISINSLKLGGK >Mature_210_residues ADTRLYNYALKAHGLEDMAYAKAFIRKVLTEGASDKNAFANKLSDNRYAELAKSLDFAGLGAAATATEAAKSGVIGNYAR QTLEQEAGDDNNGVRLALYFERKAPTIKSGLDFLADDALAQVFRTTFNLPDAFAAADVDKQAALIEKSINIKDLQDPEKV GKLLERFTIMWEMQNPSTTYDPLAVFGSSSGYGISPDLLISINSLKLGGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22843; Mature: 22712
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTRLYNYALKAHGLEDMAYAKAFIRKVLTEGASDKNAFANKLSDNRYAELAKSLDFAG CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCC LGAAATATEAAKSGVIGNYARQTLEQEAGDDNNGVRLALYFERKAPTIKSGLDFLADDAL CCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH AQVFRTTFNLPDAFAAADVDKQAALIEKSINIKDLQDPEKVGKLLERFTIMWEMQNPSTT HHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCC YDPLAVFGSSSGYGISPDLLISINSLKLGGK CCCCEEEECCCCCCCCCCEEEEEECEECCCC >Mature Secondary Structure ADTRLYNYALKAHGLEDMAYAKAFIRKVLTEGASDKNAFANKLSDNRYAELAKSLDFAG CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCC LGAAATATEAAKSGVIGNYARQTLEQEAGDDNNGVRLALYFERKAPTIKSGLDFLADDAL CCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH AQVFRTTFNLPDAFAAADVDKQAALIEKSINIKDLQDPEKVGKLLERFTIMWEMQNPSTT HHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCC YDPLAVFGSSSGYGISPDLLISINSLKLGGK CCCCEEEECCCCCCCCCCEEEEEECEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA