Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184356
Identifier: 159184356
GI number: 159184356
Start: 524663
End: 525415
Strand: Reverse
Name: 159184356
Synonym: Atu0531
Alternate gene names: NA
Gene position: 525415-524663 (Counterclockwise)
Preceding gene: 159184357
Following gene: 15887876
Centisome position: 18.49
GC content: 59.36
Gene sequence:
>753_bases GTGCTGCTTGCCAATGACAAGAAGCATCTCAAGAGCCTGCTGACCTATCTCAATCTGGCGCCCGCCACACGCTTTGCCGA ACCGCCACCAAAGATGAAGCACGCCAAGCGACAGAAGCTTGCAGCCAGAACGGTTTACCTGCCGCCGCACCTGCTGAAAT TCGAACGGGCTGGCGATAGGCCATCTTTCGCCCGGGACTTCGTTATTTCCGGCAAAGACCTTTGCGACCGCTTCACCGCC GCCGGTTTTTCCAACCCGAAGGGATGGCAGGCCAGCCCGGTCAGCATCCGCAACTTCGAGTGCATGGCCGACCTTGCCGC GGTAAAGGCGGAAGACCCGGCACAGCGCGCATCGCTTTTCATTGACATCAGGGGAGAGGCTTCCGGCGACATTCGCTCCA TCAGAATAAAGGCGGTTGCCCCGGAGACGCCTGACGGCGCCGCCATTTTAACGAAGCTTGAGAAAACGCTCACTTTGGTC ATCGCGCAAACCCACTGGACTGATCTTGCCAGCATGCTTGAACCGGCTCGCAGGATGCAGGCCTATCAAGCGCAGCACTT CGGTATCTCAGTTTCCATCAAACCGGAACCAACCGCACCGCACCGGCTGAACGTGATTTTACTGGCGAGCGAGGAACCGC CGGGGGTGAAGCTGACACGCGCATTTTTCGACCGGGACCGTTGGCTTCGCCCGGCCGCACTTTCGGATCGGCCGATACCG CATCCTTCCGTCACGAAAAGCCACGTCCCGTGA
Upstream 100 bases:
>100_bases CCCTTAAGGTCTTGCGATGGACGCAGGCTTGCAAAAGAGAGTGAGCTCTGGCGCACTGCTGTTTGCGGTGTTGGCCGTCT GTTTTGCCATAGGGGCGACG
Downstream 100 bases:
>100_bases CATAAAGACGGCTCAGCCTATCGCTGCCAGCTTGCGCCGCATCGGCGGTATTCTGCCGCTTTGCTGGGCCTGACGCTTGG CTTCCCATTGAAGCGCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Exopolysaccharide Synthesis Protein
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MLLANDKKHLKSLLTYLNLAPATRFAEPPPKMKHAKRQKLAARTVYLPPHLLKFERAGDRPSFARDFVISGKDLCDRFTA AGFSNPKGWQASPVSIRNFECMADLAAVKAEDPAQRASLFIDIRGEASGDIRSIRIKAVAPETPDGAAILTKLEKTLTLV IAQTHWTDLASMLEPARRMQAYQAQHFGISVSIKPEPTAPHRLNVILLASEEPPGVKLTRAFFDRDRWLRPAALSDRPIP HPSVTKSHVP
Sequences:
>Translated_250_residues MLLANDKKHLKSLLTYLNLAPATRFAEPPPKMKHAKRQKLAARTVYLPPHLLKFERAGDRPSFARDFVISGKDLCDRFTA AGFSNPKGWQASPVSIRNFECMADLAAVKAEDPAQRASLFIDIRGEASGDIRSIRIKAVAPETPDGAAILTKLEKTLTLV IAQTHWTDLASMLEPARRMQAYQAQHFGISVSIKPEPTAPHRLNVILLASEEPPGVKLTRAFFDRDRWLRPAALSDRPIP HPSVTKSHVP >Mature_250_residues MLLANDKKHLKSLLTYLNLAPATRFAEPPPKMKHAKRQKLAARTVYLPPHLLKFERAGDRPSFARDFVISGKDLCDRFTA AGFSNPKGWQASPVSIRNFECMADLAAVKAEDPAQRASLFIDIRGEASGDIRSIRIKAVAPETPDGAAILTKLEKTLTLV IAQTHWTDLASMLEPARRMQAYQAQHFGISVSIKPEPTAPHRLNVILLASEEPPGVKLTRAFFDRDRWLRPAALSDRPIP HPSVTKSHVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27750; Mature: 27750
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLANDKKHLKSLLTYLNLAPATRFAEPPPKMKHAKRQKLAARTVYLPPHLLKFERAGDR CCCCCCHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHEEEECCHHHHHHHCCCCC PSFARDFVISGKDLCDRFTAAGFSNPKGWQASPVSIRNFECMADLAAVKAEDPAQRASLF CCHHHHHEECCHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCEEE IDIRGEASGDIRSIRIKAVAPETPDGAAILTKLEKTLTLVIAQTHWTDLASMLEPARRMQ EEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHH AYQAQHFGISVSIKPEPTAPHRLNVILLASEEPPGVKLTRAFFDRDRWLRPAALSDRPIP HHHHHHCCEEEEECCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC HPSVTKSHVP CCCCCCCCCC >Mature Secondary Structure MLLANDKKHLKSLLTYLNLAPATRFAEPPPKMKHAKRQKLAARTVYLPPHLLKFERAGDR CCCCCCHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHEEEECCHHHHHHHCCCCC PSFARDFVISGKDLCDRFTAAGFSNPKGWQASPVSIRNFECMADLAAVKAEDPAQRASLF CCHHHHHEECCHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCEEE IDIRGEASGDIRSIRIKAVAPETPDGAAILTKLEKTLTLVIAQTHWTDLASMLEPARRMQ EEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHH AYQAQHFGISVSIKPEPTAPHRLNVILLASEEPPGVKLTRAFFDRDRWLRPAALSDRPIP HHHHHHCCEEEEECCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC HPSVTKSHVP CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA