Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184311
Identifier: 159184311
GI number: 159184311
Start: 447142
End: 447747
Strand: Reverse
Name: 159184311
Synonym: Atu0452
Alternate gene names: NA
Gene position: 447747-447142 (Counterclockwise)
Preceding gene: 15887810
Following gene: 15887791
Centisome position: 15.76
GC content: 61.72
Gene sequence:
>606_bases ATGACGATCTGCGGGCGGTCCGGGGCCGCCCTGCCGTTCGACATGAACGACAAGCGGACCGTTTCGCCAAAAGCGCCGCC AACCTTCCGGTCAACGGCGGCTTCCAGTTTTCGCCAGTCCACCATCTTACTGATGCAAGATGAGGTCGCCGGTCGCCGAC GGATTGGCGGCGACGGCGGCGGCGTAACCGACCTTGGTATTTGCGCCAGCATTATCGGCGGTGGTCAGCTTGGTACCATC CCAATAAAGGACTGCGCCTTCGGCCCATGCCTGCGCGTTCGTCTTGGGCAGGGCGAAAATGCCCGAGCGGGAAATATTGA CGCGCTGACCAGCCTTGGCGGAAAACTCCGCTACGCCGAACAGCTTGCCAACAAGAACGCCGTCGCCGGAATTGACATCG GCGGGCGCGGTGACTTCCACCGTGTCGGCGGGGCCTCGATAGTTTTTCATGGTGATCTTCCTTGCGATCAACGTGACGAA GAAAGGGAGAGCCGGGCGGCTCCCCCAACGAAGTCAGGCAGGCGGCTTACGCTTGGCCGGGGTTGTGATAGCCGAAGCGG AAATCGGTCGCACCGCAACCGAAGTCGTGTTCCACCGACATGCTGA
Upstream 100 bases:
>100_bases AACGGCATCCGCCGCAGCGAAGCGAACGCGATGAGGGCCGCTGACGGCATTGCCTGCCGGTCGCGTTGTGTCGTCTTCCG TGTGAAGGGCCTCGCAGCGG
Downstream 100 bases:
>100_bases AGCCGACGCGGACCGGCTTGACCAGCGTTACCCGCTCAATCGCGCTATCGCCAATGGCGTCGGCGATTTCACGCTGCGGG GGCCACAGCCGAACCTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MTICGRSGAALPFDMNDKRTVSPKAPPTFRSTAASSFRQSTILLMQDEVAGRRRIGGDGGGVTDLGICASIIGGGQLGTI PIKDCAFGPCLRVRLGQGENARAGNIDALTSLGGKLRYAEQLANKNAVAGIDIGGRGDFHRVGGASIVFHGDLPCDQRDE ERESRAAPPTKSGRRLTLGRGCDSRSGNRSHRNRSRVPPTC
Sequences:
>Translated_201_residues MTICGRSGAALPFDMNDKRTVSPKAPPTFRSTAASSFRQSTILLMQDEVAGRRRIGGDGGGVTDLGICASIIGGGQLGTI PIKDCAFGPCLRVRLGQGENARAGNIDALTSLGGKLRYAEQLANKNAVAGIDIGGRGDFHRVGGASIVFHGDLPCDQRDE ERESRAAPPTKSGRRLTLGRGCDSRSGNRSHRNRSRVPPTC >Mature_200_residues TICGRSGAALPFDMNDKRTVSPKAPPTFRSTAASSFRQSTILLMQDEVAGRRRIGGDGGGVTDLGICASIIGGGQLGTIP IKDCAFGPCLRVRLGQGENARAGNIDALTSLGGKLRYAEQLANKNAVAGIDIGGRGDFHRVGGASIVFHGDLPCDQRDEE RESRAAPPTKSGRRLTLGRGCDSRSGNRSHRNRSRVPPTC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21160; Mature: 21029
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTICGRSGAALPFDMNDKRTVSPKAPPTFRSTAASSFRQSTILLMQDEVAGRRRIGGDGG CEEECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHEEEEEEECCCCCHHCCCCCCC GVTDLGICASIIGGGQLGTIPIKDCAFGPCLRVRLGQGENARAGNIDALTSLGGKLRYAE CCHHHHHHHHHHCCCCCCCEEHHCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCHHHHH QLANKNAVAGIDIGGRGDFHRVGGASIVFHGDLPCDQRDEERESRAAPPTKSGRRLTLGR HHCCCCCEEEEEECCCCCCEECCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCCEEEECC GCDSRSGNRSHRNRSRVPPTC CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TICGRSGAALPFDMNDKRTVSPKAPPTFRSTAASSFRQSTILLMQDEVAGRRRIGGDGG EEECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHEEEEEEECCCCCHHCCCCCCC GVTDLGICASIIGGGQLGTIPIKDCAFGPCLRVRLGQGENARAGNIDALTSLGGKLRYAE CCHHHHHHHHHHCCCCCCCEEHHCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCHHHHH QLANKNAVAGIDIGGRGDFHRVGGASIVFHGDLPCDQRDEERESRAAPPTKSGRRLTLGR HHCCCCCEEEEEECCCCCCEECCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCCEEEECC GCDSRSGNRSHRNRSRVPPTC CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA