Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184182
Identifier: 159184182
GI number: 159184182
Start: 156680
End: 157276
Strand: Reverse
Name: 159184182
Synonym: Atu0148
Alternate gene names: NA
Gene position: 157276-156680 (Counterclockwise)
Preceding gene: 159184183
Following gene: 159184181
Centisome position: 5.53
GC content: 54.27
Gene sequence:
>597_bases ATGCGACTGGCCAGACTGAAGCCATTGCTGGAAAAATTCGGGTTCTCCCGTGACGGGACAGCAGCCATCGAATTCGCGAT CCTGGCCATTCCTTATTTCCTCGTCGTTTTTGCGATCATCGAGACCTTCATCGCCCTCATGGCGGAACAGGTCGTCGCCA ACGCCACCGAGACCATGTCGCGGCGTCTGCGCACCGGGCAGATCAGCAGCTCGATTACGAAAGAGGATTTTCGCAGGAGT TTCTGCAACGAAGTTTCTGTGATGATCGCCTGCTCGGAAGACGAGATCAAAAAAGAAGAGAAACTGTATGTCGACCTTCG CTCTTTTACCGCCTTCAAGGATATTCCGACCACGATACCCCTGAAAGCCTATGGCGAATATTACGATCTCGATACGGCCC AGTTCGGTTTCAAGCCAGGCGGACCGGAAACCATCAACATGTTGCGCGTCTATTATCGCTGGCGTGTGGTCGCCGATATC ATCCGACCCTATCTCACCAAAATACGCCCCGCCGACGGATCGATGCCCTCCCATTTCCTCATCGTCGCGACGAGTGCGTT CATGAGCGAGAAATACATCACAGGCGGGGGGGCATGA
Upstream 100 bases:
>100_bases AGTTTATCGAAGTAACTGAATTTAAACATGGGGTGGTTATGGTCCGCAACAAATTCAACGGTTGCGCTTGCCGCATATTC TTAGAGATCGACACCACCTC
Downstream 100 bases:
>100_bases TGGAAAGGCTTGTCTTGGTTGCGGCAAGCGGCAGGCGGCGTCTGATCGCGCTCGTTTCACGCTTTGCCGGAGATAGCCGG GGCGTGGGCGCGGTGGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: Flp Pilus Assembly Protein TadG; TadE-Like; TadE-Like Protein; TadG-Like Pilus Assembly Protein; Transmembrane Protein; Signal Peptide; Tade Family Protein
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MRLARLKPLLEKFGFSRDGTAAIEFAILAIPYFLVVFAIIETFIALMAEQVVANATETMSRRLRTGQISSSITKEDFRRS FCNEVSVMIACSEDEIKKEEKLYVDLRSFTAFKDIPTTIPLKAYGEYYDLDTAQFGFKPGGPETINMLRVYYRWRVVADI IRPYLTKIRPADGSMPSHFLIVATSAFMSEKYITGGGA
Sequences:
>Translated_198_residues MRLARLKPLLEKFGFSRDGTAAIEFAILAIPYFLVVFAIIETFIALMAEQVVANATETMSRRLRTGQISSSITKEDFRRS FCNEVSVMIACSEDEIKKEEKLYVDLRSFTAFKDIPTTIPLKAYGEYYDLDTAQFGFKPGGPETINMLRVYYRWRVVADI IRPYLTKIRPADGSMPSHFLIVATSAFMSEKYITGGGA >Mature_198_residues MRLARLKPLLEKFGFSRDGTAAIEFAILAIPYFLVVFAIIETFIALMAEQVVANATETMSRRLRTGQISSSITKEDFRRS FCNEVSVMIACSEDEIKKEEKLYVDLRSFTAFKDIPTTIPLKAYGEYYDLDTAQFGFKPGGPETINMLRVYYRWRVVADI IRPYLTKIRPADGSMPSHFLIVATSAFMSEKYITGGGA
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22386; Mature: 22386
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLARLKPLLEKFGFSRDGTAAIEFAILAIPYFLVVFAIIETFIALMAEQVVANATETMS CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRLRTGQISSSITKEDFRRSFCNEVSVMIACSEDEIKKEEKLYVDLRSFTAFKDIPTTIP HHHHHCHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCC LKAYGEYYDLDTAQFGFKPGGPETINMLRVYYRWRVVADIIRPYLTKIRPADGSMPSHFL HHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE IVATSAFMSEKYITGGGA EEEHHHHHHHHCCCCCCC >Mature Secondary Structure MRLARLKPLLEKFGFSRDGTAAIEFAILAIPYFLVVFAIIETFIALMAEQVVANATETMS CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRLRTGQISSSITKEDFRRSFCNEVSVMIACSEDEIKKEEKLYVDLRSFTAFKDIPTTIP HHHHHCHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCC LKAYGEYYDLDTAQFGFKPGGPETINMLRVYYRWRVVADIIRPYLTKIRPADGSMPSHFL HHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE IVATSAFMSEKYITGGGA EEEHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA