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The map label for this gene is pss [H]

Identifier: 159184156

GI number: 159184156

Start: 105470

End: 106195

Strand: Reverse

Name: pss [H]

Synonym: Atu0102

Alternate gene names: 159184156

Gene position: 106195-105470 (Counterclockwise)

Preceding gene: 15887457

Following gene: 15887454

Centisome position: 3.74

GC content: 57.02

Gene sequence:

>726_bases
ATGCTGGGTACTAAAAGCTCATCGCATGCCGTTTTTTACGGCGCTCCCTATCCTGCCGTCCCGTTTGAAACGGCGGAAAT
GCAATCTCCCATATCGGATAAAAAACCATCTTCATTGCAGCGCGGTCAGTTTGCGCTCAAAAGAACCATAGACATTGCAG
GGGCGTCCATCGCCCTTGTCGCACTTGCCCCTGTATTGGCGACCGTCGCATTGCTGGTAAAGCTCGACAGCAAAGGCCCG
GTCCTGTTCTCGCAGGTCCGCTGGGGCATGAATGGAAGAAAAATCCGCGTCTATAAATTTCGCTCGATGCAGGCCGAACT
GGGTGATGTCACCGGAGTAGCGCAAACGGTGAAGAACGACCCGCGGATAACCCGTATTGGCGCCATTCTCCGGCGTACGA
ATATCGACGAACTGCCGCAGCTGATCAATGTCCTGAAGGGCGACATGTCGCTGGTGGGCCCACGCTGCCATGCCGTCGGC
ATGCTGGCAGCCGGCCGTCTTTATGAGGAGCTGGTTCCGCACTATCACATGCGGCACCGAATGCGGCCCGGCATTACCGG
CCTCGCCCAGATGCGGGGACTACGCGGCCCGACGGATCGCAGCGACAAGGCTCGTGCCCGAATCGTCTCCGATCTCTATT
ATGTCGAGAATTTTTCGGTCTGGCTGGATATCAAGATCATGGTCGGAACGGTGATTTCCGAATTGCGCGGCGGCAAGGGC
TTCTGA

Upstream 100 bases:

>100_bases
TACGACTACATTTCGGGTGACTTTTTAGGGTAAATGAATTATTAATCGTTCATATAAATTAATTTTCTTGTTTCAAAATA
ACTTTTCAGGGTTCCATATT

Downstream 100 bases:

>100_bases
TTTTTCAGGCGCCATTGCCGTATTTTCAATCCGCCCGTCCAAAAACAAAAGCCCGGCAGCGATACCGGGCTTTTATCATG
AACCATCATGATCATCAGTT

Product: exopolysaccharide production protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MLGTKSSSHAVFYGAPYPAVPFETAEMQSPISDKKPSSLQRGQFALKRTIDIAGASIALVALAPVLATVALLVKLDSKGP
VLFSQVRWGMNGRKIRVYKFRSMQAELGDVTGVAQTVKNDPRITRIGAILRRTNIDELPQLINVLKGDMSLVGPRCHAVG
MLAAGRLYEELVPHYHMRHRMRPGITGLAQMRGLRGPTDRSDKARARIVSDLYYVENFSVWLDIKIMVGTVISELRGGKG
F

Sequences:

>Translated_241_residues
MLGTKSSSHAVFYGAPYPAVPFETAEMQSPISDKKPSSLQRGQFALKRTIDIAGASIALVALAPVLATVALLVKLDSKGP
VLFSQVRWGMNGRKIRVYKFRSMQAELGDVTGVAQTVKNDPRITRIGAILRRTNIDELPQLINVLKGDMSLVGPRCHAVG
MLAAGRLYEELVPHYHMRHRMRPGITGLAQMRGLRGPTDRSDKARARIVSDLYYVENFSVWLDIKIMVGTVISELRGGKG
F
>Mature_241_residues
MLGTKSSSHAVFYGAPYPAVPFETAEMQSPISDKKPSSLQRGQFALKRTIDIAGASIALVALAPVLATVALLVKLDSKGP
VLFSQVRWGMNGRKIRVYKFRSMQAELGDVTGVAQTVKNDPRITRIGAILRRTNIDELPQLINVLKGDMSLVGPRCHAVG
MLAAGRLYEELVPHYHMRHRMRPGITGLAQMRGLRGPTDRSDKARARIVSDLYYVENFSVWLDIKIMVGTVISELRGGKG
F

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=212, Percent_Identity=48.5849056603774, Blast_Score=195, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 26516; Mature: 26516

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGTKSSSHAVFYGAPYPAVPFETAEMQSPISDKKPSSLQRGQFALKRTIDIAGASIALV
CCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
ALAPVLATVALLVKLDSKGPVLFSQVRWGMNGRKIRVYKFRSMQAELGDVTGVAQTVKND
HHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCC
PRITRIGAILRRTNIDELPQLINVLKGDMSLVGPRCHAVGMLAAGRLYEELVPHYHMRHR
CCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MRPGITGLAQMRGLRGPTDRSDKARARIVSDLYYVENFSVWLDIKIMVGTVISELRGGKG
CCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCC
F
C
>Mature Secondary Structure
MLGTKSSSHAVFYGAPYPAVPFETAEMQSPISDKKPSSLQRGQFALKRTIDIAGASIALV
CCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
ALAPVLATVALLVKLDSKGPVLFSQVRWGMNGRKIRVYKFRSMQAELGDVTGVAQTVKND
HHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCC
PRITRIGAILRRTNIDELPQLINVLKGDMSLVGPRCHAVGMLAAGRLYEELVPHYHMRHR
CCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MRPGITGLAQMRGLRGPTDRSDKARARIVSDLYYVENFSVWLDIKIMVGTVISELRGGKG
CCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2851702 [H]