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The map label for this gene is rsmC [H]

Identifier: 159184152

GI number: 159184152

Start: 83313

End: 84329

Strand: Reverse

Name: rsmC [H]

Synonym: Atu0081

Alternate gene names: 159184152

Gene position: 84329-83313 (Counterclockwise)

Preceding gene: 15887437

Following gene: 15887433

Centisome position: 2.97

GC content: 61.36

Gene sequence:

>1017_bases
ATGAGCCGTGACGCCGTGAAAACCCTTTTCCATCCCTTTGCCTCGGACATGCTTGCCATGCCGAAAGAAGGCGAACGCGT
TCTGTTTCTGGGCGCGGAAGCCGGCCCACGGCTGGATGGCTTCGATGCGGAGATCGTCGCGGTTCAGCATCTTCGCCCGC
TCTATCGCGCTCTTGAGGCTCAGGGCACAGGGGTTGCCCCAGACGTTTCGGGCGAAGACTACGATGCGGCGCTGCTGCTC
TGCGGCAAGCACCGTGGCGAGAACGAAAACCGTGTCGCAGAAGCGCTTTCGCGCGTGAAGGCCGGCGGCTTGATCGTCGC
GGCCGGATCGAAGGAAGATGGCATTGTGACGCTGCGCAAGACGCTGTCAAAGCTCGGCATCGAGTCGGAATCGACACCGA
AATATCACGGCGTCGCAATCTGGTTCAAACGGCCGGAGGATGTCTCCGCCGCCGTCTTGAAGCTTGCCCAGAAGCCCGCC
ACTGTCGAGGGTCGCTTTACCGCCCTGCCCGGCATGTTCTCCCATGATCGCGTGGATGACGGTTCGGAGCTTCTCGCATC
GCGCCTGCCGACCGACTTTGACGGCAATGCCGCCGATTTCGGTGCAGGCTGGGGTTATCTCTCCATCATGCTGGCGGAAA
AATCGCCGCGCACCGCCCGTATCGATCTTTTCGAAGCGGACTGGAATGCGCTGGAATTCGCCAAGACCAATCTTCTCGAA
AACAATCCGCGACTGACGGCACGCTTCTTCTGGCAGGATCTGGCAAACGAGCCGCCGAAGGAAAAATACGACCTCATCAT
CATGAACCCGCCTTTCCATGCAGCCGGACAGGCGGCGGAACCAGCGTTGGGCCAGGCCTTCATCAAGGCTGCGGCCGGTG
CGTTGCGCAGCGGCGGCAAGCTGCTGATGGTGGCCAATCGCGGTCTGCCCTACGAACCGGTTCTGGCGGCGGAATTCCGC
ACGACCGCCGAAGTGTGCCGCAACGCCCGCTTCAAGATCCTGAGCGCCCAGAAATAA

Upstream 100 bases:

>100_bases
TGCCCGCGCCTTTTTTTCGTTTTTGTTATCGTTTGTCTTTTCGGGAAAACCGGTTTCCACTTTTCCCTGACAAACTCCAT
CCTACCTTGAGGACGCTCCA

Downstream 100 bases:

>100_bases
CCAAAATCAGCTCAGCAGCCAGGCCCATAGAGACACGGACAGAACGCCGGTCGCTGTGGAAATGCTGATGGTGGAGGCCG
CGACACTGTGGCCGATACCG

Product: ribosomal RNA small subunit methyltransferase

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSRDAVKTLFHPFASDMLAMPKEGERVLFLGAEAGPRLDGFDAEIVAVQHLRPLYRALEAQGTGVAPDVSGEDYDAALLL
CGKHRGENENRVAEALSRVKAGGLIVAAGSKEDGIVTLRKTLSKLGIESESTPKYHGVAIWFKRPEDVSAAVLKLAQKPA
TVEGRFTALPGMFSHDRVDDGSELLASRLPTDFDGNAADFGAGWGYLSIMLAEKSPRTARIDLFEADWNALEFAKTNLLE
NNPRLTARFFWQDLANEPPKEKYDLIIMNPPFHAAGQAAEPALGQAFIKAAAGALRSGGKLLMVANRGLPYEPVLAAEFR
TTAEVCRNARFKILSAQK

Sequences:

>Translated_338_residues
MSRDAVKTLFHPFASDMLAMPKEGERVLFLGAEAGPRLDGFDAEIVAVQHLRPLYRALEAQGTGVAPDVSGEDYDAALLL
CGKHRGENENRVAEALSRVKAGGLIVAAGSKEDGIVTLRKTLSKLGIESESTPKYHGVAIWFKRPEDVSAAVLKLAQKPA
TVEGRFTALPGMFSHDRVDDGSELLASRLPTDFDGNAADFGAGWGYLSIMLAEKSPRTARIDLFEADWNALEFAKTNLLE
NNPRLTARFFWQDLANEPPKEKYDLIIMNPPFHAAGQAAEPALGQAFIKAAAGALRSGGKLLMVANRGLPYEPVLAAEFR
TTAEVCRNARFKILSAQK
>Mature_337_residues
SRDAVKTLFHPFASDMLAMPKEGERVLFLGAEAGPRLDGFDAEIVAVQHLRPLYRALEAQGTGVAPDVSGEDYDAALLLC
GKHRGENENRVAEALSRVKAGGLIVAAGSKEDGIVTLRKTLSKLGIESESTPKYHGVAIWFKRPEDVSAAVLKLAQKPAT
VEGRFTALPGMFSHDRVDDGSELLASRLPTDFDGNAADFGAGWGYLSIMLAEKSPRTARIDLFEADWNALEFAKTNLLEN
NPRLTARFFWQDLANEPPKEKYDLIIMNPPFHAAGQAAEPALGQAFIKAAAGALRSGGKLLMVANRGLPYEPVLAAEFRT
TAEVCRNARFKILSAQK

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=323, Percent_Identity=29.4117647058824, Blast_Score=98, Evalue=8e-22,
Organism=Escherichia coli, GI87082206, Length=194, Percent_Identity=25.2577319587629, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR002296
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 36663; Mature: 36532

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRDAVKTLFHPFASDMLAMPKEGERVLFLGAEAGPRLDGFDAEIVAVQHLRPLYRALEA
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHC
QGTGVAPDVSGEDYDAALLLCGKHRGENENRVAEALSRVKAGGLIVAAGSKEDGIVTLRK
CCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEHHHH
TLSKLGIESESTPKYHGVAIWFKRPEDVSAAVLKLAQKPATVEGRFTALPGMFSHDRVDD
HHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC
GSELLASRLPTDFDGNAADFGAGWGYLSIMLAEKSPRTARIDLFEADWNALEFAKTNLLE
HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHC
NNPRLTARFFWQDLANEPPKEKYDLIIMNPPFHAAGQAAEPALGQAFIKAAAGALRSGGK
CCCCEEHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
LLMVANRGLPYEPVLAAEFRTTAEVCRNARFKILSAQK
EEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCC
>Mature Secondary Structure 
SRDAVKTLFHPFASDMLAMPKEGERVLFLGAEAGPRLDGFDAEIVAVQHLRPLYRALEA
CHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHC
QGTGVAPDVSGEDYDAALLLCGKHRGENENRVAEALSRVKAGGLIVAAGSKEDGIVTLRK
CCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEHHHH
TLSKLGIESESTPKYHGVAIWFKRPEDVSAAVLKLAQKPATVEGRFTALPGMFSHDRVDD
HHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC
GSELLASRLPTDFDGNAADFGAGWGYLSIMLAEKSPRTARIDLFEADWNALEFAKTNLLE
HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHC
NNPRLTARFFWQDLANEPPKEKYDLIIMNPPFHAAGQAAEPALGQAFIKAAAGALRSGGK
CCCCEEHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
LLMVANRGLPYEPVLAAEFRTTAEVCRNARFKILSAQK
EEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA