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The map label for this gene is yaeJ [C]

Identifier: 159184133

GI number: 159184133

Start: 39327

End: 39761

Strand: Direct

Name: yaeJ [C]

Synonym: Atu0036

Alternate gene names: 159184133

Gene position: 39327-39761 (Clockwise)

Preceding gene: 159184132

Following gene: 229007174

Centisome position: 1.38

GC content: 60.92

Gene sequence:

>435_bases
ATGGCCAGCGACCCGCTTTACATCAGCAACCGTATCACCATCGCCGGCTGGGAGCTGACGGAGCAATTCGTGCTGGCCGG
CGGGCCGGGCGGCCAGAACGTCAACAAGGTCTCGACGGCGGTTCAGCTGTTTTTCGATATTGCCAATTCACCGTCCCTCT
CGGATCGGGTGAAGGCCAATGCCGTCAGGCTTGGCGGTCGACGTGTTTCGAAAGAGGGTGTGCTGATGATCGAGGCCAGC
CGGTTTCGAAGTCAGGAGCGCAATCGTGAAGATGCGCGCGAGCGGCTGAAGGAGCTGATACTGGAAGCTGCCGCCCCGCC
GCCGCCGGTGCGCAAGGCCACCAAACCCACCAAGGGATCTGTCGAACGCCGCCTCAAGGCAAAATCCGGTCGTTCCGATA
TCAAGAAAATGCGCGGCAAACCCTCGGGCGATTAA

Upstream 100 bases:

>100_bases
AACCCGGCCCAGTGCCGGGTTTCTTTTTGCCGGGTTCTTTCATTTTGTCCGCTGTTTTCATTTTTTGCGTTCTGTGGCAT
CACCGGCGCGGAGAAAGATC

Downstream 100 bases:

>100_bases
CCCGCAAGCACCCAGTTTGTCAGAGCTTTCGCAGCGCCACCGTATCTATCAGGTGGTTCTCTCCCTTGCGCAGAATAAGA
TCGGCGCGCGGGCGCGTCGG

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MASDPLYISNRITIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFDIANSPSLSDRVKANAVRLGGRRVSKEGVLMIEAS
RFRSQERNREDARERLKELILEAAAPPPPVRKATKPTKGSVERRLKAKSGRSDIKKMRGKPSGD

Sequences:

>Translated_144_residues
MASDPLYISNRITIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFDIANSPSLSDRVKANAVRLGGRRVSKEGVLMIEAS
RFRSQERNREDARERLKELILEAAAPPPPVRKATKPTKGSVERRLKAKSGRSDIKKMRGKPSGD
>Mature_143_residues
ASDPLYISNRITIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFDIANSPSLSDRVKANAVRLGGRRVSKEGVLMIEASR
FRSQERNREDARERLKELILEAAAPPPPVRKATKPTKGSVERRLKAKSGRSDIKKMRGKPSGD

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=135, Percent_Identity=42.2222222222222, Blast_Score=92, Evalue=2e-20,
Organism=Drosophila melanogaster, GI19921098, Length=124, Percent_Identity=34.6774193548387, Blast_Score=73, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15785; Mature: 15654

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASDPLYISNRITIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFDIANSPSLSDRVKAN
CCCCCEEECCEEEEEECHHCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
AVRLGGRRVSKEGVLMIEASRFRSQERNREDARERLKELILEAAAPPPPVRKATKPTKGS
HHHCCCEEECCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
VERRLKAKSGRSDIKKMRGKPSGD
HHHHHHHCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
ASDPLYISNRITIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFDIANSPSLSDRVKAN
CCCCEEECCEEEEEECHHCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
AVRLGGRRVSKEGVLMIEASRFRSQERNREDARERLKELILEAAAPPPPVRKATKPTKGS
HHHCCCEEECCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
VERRLKAKSGRSDIKKMRGKPSGD
HHHHHHHCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]