Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 159184130

Identifier: 159184130

GI number: 159184130

Start: 31670

End: 31837

Strand: Reverse

Name: 159184130

Synonym: Atu0028

Alternate gene names: NA

Gene position: 31837-31670 (Counterclockwise)

Preceding gene: 15887387

Following gene: 15887386

Centisome position: 1.12

GC content: 55.36

Gene sequence:

>168_bases
GTGCGCTTGACAAAGCGCGCGGCATCTTTTTTGCGCGCTCCCTTCCCGCAGATTTATGAAGACGGTATTGTCATCGGACT
TGATTCGGACACACCAAAGGGCGGCGTGGACGAAATGGGATGTCTTGTCGAAGATGCGGCACATAGGACGGAGACAGACC
GGGGATGA

Upstream 100 bases:

>100_bases
ATTATATCGGCATCTCCAAGCAGGGTCCGTTCAAGGCTGAACACTACAGATATTAATATCATAGTTAATATCCACTGAAA
TTACACAATATCTAGATGCC

Downstream 100 bases:

>100_bases
CGGTTCACAATTCGGATCTGCGCGAGCAGACAGTTCAACGCGTTGAAAACACGCACGCAAGCGTGGCATCAAGCACGCGG
GCGTTGGAGCGTTTCTGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 55

Protein sequence:

>55_residues
MRLTKRAASFLRAPFPQIYEDGIVIGLDSDTPKGGVDEMGCLVEDAAHRTETDRG

Sequences:

>Translated_55_residues
MRLTKRAASFLRAPFPQIYEDGIVIGLDSDTPKGGVDEMGCLVEDAAHRTETDRG
>Mature_55_residues
MRLTKRAASFLRAPFPQIYEDGIVIGLDSDTPKGGVDEMGCLVEDAAHRTETDRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6008; Mature: 6008

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTKRAASFLRAPFPQIYEDGIVIGLDSDTPKGGVDEMGCLVEDAAHRTETDRG
CCCHHHHHHHHHCCCCHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRLTKRAASFLRAPFPQIYEDGIVIGLDSDTPKGGVDEMGCLVEDAAHRTETDRG
CCCHHHHHHHHHCCCCHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA