Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is coaE
Identifier: 159184121
GI number: 159184121
Start: 2508
End: 3089
Strand: Direct
Name: coaE
Synonym: Atu0004
Alternate gene names: 159184121
Gene position: 2508-3089 (Clockwise)
Preceding gene: 159184120
Following gene: 15887364
Centisome position: 0.09
GC content: 56.19
Gene sequence:
>582_bases ATGATCGTCATCGGTCTCACCGGTTCGATTGGAATGGGAAAAACCACGACGGCGAAGCTCTTCGCCGAAGAGGGTGTTCC GGTTCTCGATTCCGATGAGGTCGTGCACGGGCTTTATCGTGCGGAAGCCGTTCCACTGATCGACGCCGCCTTTCCCGGCA CGACGATTTCCGGCATGGTCGACCGGCAGAAACTTGGAGACGTGCTGCGAAAGAATCCGGCTAATTTTAACAGGTTGGAA GAGATCGTTCATCCGCTGGTGCGCAACAGACAGGAGGCCTTTCTGGCAAAGGCAAGGATAGACGATCGGGCTTTTGCTCT GCTCGACATACCCTTGCTGTTTGAAACGGGGGCGGAAGGACGGGTCGATAAAGTCGTGGTGGTGAGTTGCGCGCCGGAAA TCCAGCGCGAGCGCGTTTTATCCCGGCCCGGCATGACGGAGGAGAAATTCGAAATGATTCTTGCCCGGCAGATGCCGGAT GCGGAAAAGCGCCAGCGCGCCGATTTTGTCGTCGATTCGGGAAATGGTGTCGAAGCGGCACGGGATCAGGTAAAAGAAAT TCTGCAGAAACTAGGCGCTTGA
Upstream 100 bases:
>100_bases TTCATCAGGCAAAACCTGGTTTCAGGCGATGGTTCGGCAGGATTCCGGAGGTGGATGAAACCCTTCGTTCCCTGATCATC GCGGATATGGAGAAACATTG
Downstream 100 bases:
>100_bases GTCGCGCCGCGGAGAGATGAATGCGTGAGATCATTTTCGATACGGAAACCACGGGCCTCGAATCGAAGCTGGACCGCGTG ATTGAAATCGGCGGTATCGA
Product: dephospho-CoA kinase
Products: NA
Alternate protein names: Dephosphocoenzyme A kinase
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MIVIGLTGSIGMGKTTTAKLFAEEGVPVLDSDEVVHGLYRAEAVPLIDAAFPGTTISGMVDRQKLGDVLRKNPANFNRLE EIVHPLVRNRQEAFLAKARIDDRAFALLDIPLLFETGAEGRVDKVVVVSCAPEIQRERVLSRPGMTEEKFEMILARQMPD AEKRQRADFVVDSGNGVEAARDQVKEILQKLGA
Sequences:
>Translated_193_residues MIVIGLTGSIGMGKTTTAKLFAEEGVPVLDSDEVVHGLYRAEAVPLIDAAFPGTTISGMVDRQKLGDVLRKNPANFNRLE EIVHPLVRNRQEAFLAKARIDDRAFALLDIPLLFETGAEGRVDKVVVVSCAPEIQRERVLSRPGMTEEKFEMILARQMPD AEKRQRADFVVDSGNGVEAARDQVKEILQKLGA >Mature_193_residues MIVIGLTGSIGMGKTTTAKLFAEEGVPVLDSDEVVHGLYRAEAVPLIDAAFPGTTISGMVDRQKLGDVLRKNPANFNRLE EIVHPLVRNRQEAFLAKARIDDRAFALLDIPLLFETGAEGRVDKVVVVSCAPEIQRERVLSRPGMTEEKFEMILARQMPD AEKRQRADFVVDSGNGVEAARDQVKEILQKLGA
Specific function: Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
COG id: COG0237
COG function: function code H; Dephospho-CoA kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DPCK (dephospho-CoA kinase) domain
Homologues:
Organism=Homo sapiens, GI191252797, Length=192, Percent_Identity=30.7291666666667, Blast_Score=74, Evalue=6e-14, Organism=Homo sapiens, GI191252795, Length=192, Percent_Identity=30.7291666666667, Blast_Score=74, Evalue=6e-14, Organism=Escherichia coli, GI1786292, Length=181, Percent_Identity=30.939226519337, Blast_Score=82, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17554944, Length=198, Percent_Identity=29.2929292929293, Blast_Score=99, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6320402, Length=200, Percent_Identity=25.5, Blast_Score=80, Evalue=2e-16, Organism=Drosophila melanogaster, GI24644728, Length=192, Percent_Identity=28.6458333333333, Blast_Score=92, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAE_AGRT5 (Q8UJC4)
Other databases:
- EMBL: AE007869 - PIR: AE2577 - PIR: D97359 - RefSeq: NP_353044.2 - ProteinModelPortal: Q8UJC4 - SMR: Q8UJC4 - STRING: Q8UJC4 - GeneID: 1132042 - GenomeReviews: AE007869_GR - KEGG: atu:Atu0004 - eggNOG: COG0237 - HOGENOM: HBG650290 - OMA: RIIEEQY - ProtClustDB: PRK00081 - BioCyc: ATUM176299-1:ATU0004-MONOMER - GO: GO:0005737 - HAMAP: MF_00376 - InterPro: IPR001977 - TIGRFAMs: TIGR00152
Pfam domain/function: PF01121 CoaE
EC number: =2.7.1.24
Molecular weight: Translated: 21210; Mature: 21210
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS51219 DPCK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVIGLTGSIGMGKTTTAKLFAEEGVPVLDSDEVVHGLYRAEAVPLIDAAFPGTTISGMV CEEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCHHHHHH DRQKLGDVLRKNPANFNRLEEIVHPLVRNRQEAFLAKARIDDRAFALLDIPLLFETGAEG HHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEEEHHHHEECCCCC RVDKVVVVSCAPEIQRERVLSRPGMTEEKFEMILARQMPDAEKRQRADFVVDSGNGVEAA CCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHCCCEEEECCCCCHHH RDQVKEILQKLGA HHHHHHHHHHHCC >Mature Secondary Structure MIVIGLTGSIGMGKTTTAKLFAEEGVPVLDSDEVVHGLYRAEAVPLIDAAFPGTTISGMV CEEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCHHHHHH DRQKLGDVLRKNPANFNRLEEIVHPLVRNRQEAFLAKARIDDRAFALLDIPLLFETGAEG HHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEEEHHHHEECCCCC RVDKVVVVSCAPEIQRERVLSRPGMTEEKFEMILARQMPDAEKRQRADFVVDSGNGVEAA CCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHCCCEEEECCCCCHHH RDQVKEILQKLGA HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194