Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is parA [H]
Identifier: 15890074
GI number: 15890074
Start: 2833540
End: 2834334
Strand: Reverse
Name: parA [H]
Synonym: Atu2829
Alternate gene names: 15890074
Gene position: 2834334-2833540 (Counterclockwise)
Preceding gene: 15890075
Following gene: 159185404
Centisome position: 99.75
GC content: 54.34
Gene sequence:
>795_bases ATGACCTTTGAAAAAAACCGAATTATCGCAGTTGCGAACCAGAAAGGCGGCGTTGGCAAGACAACAACCGCTATCAATCT GGCGACCGCGCTTGCGGCTATTGGTGAGCGTGTGCTGATCATCGACCTGGACCCGCAGGGCAATGCGAGTACTGGGCTCG GAATTGACCGCAAAGAGCGCAAGCTTTCGTCCTATGATCTTCTGGTAGGAGAACATGGGATTGCGGAGGTTGCTGTACCC ACGGCGGTGCCGAATCTCGATATCGTGCCCTCCACAATGGATTTGCTCGGTTTCGAGATGCAGGTCGCGAATGTCGCAAA CCGCGTTTTCCTGTTGCGTGCGGCAATGGAAACGCCGGAAGCCAGAGGCTATTCCTATATTCTCGTTGATTGCCCGCCCT CTTTCAATCTTTTGACGATGAATGCGATGACGGCCGCGCATTCTGTGCTGGTGCCGCTGCAATGCGAGTTCTTTGCCCTG GAAGGTCTCAGTCAGCTGCTGGATACGGTTAGCCAGATACGCGGCTCGGTCAACCCGCAGCTTGATATACAGGGCATCGT TTTGACGATGTTCGATGCGCGTAACAATCTTGCGCAGCAGGTCGTTTCGGATGTGCGTAGCCATCTTGGCGAAAAGGTTT ACCATACTCTTATCCCGCGCAACGTCCGTGTTTCGGAAGCGCCGTCCTATGGTAAGCCGGCCATTCTCTATGATCTGAAA TGCGCCGGCAGTCAGGCCTATTTGCAACTGGCATCAGAAGTGATCCAGAGAGAGCGACTGCGCAAAGCCGCCTGA
Upstream 100 bases:
>100_bases TTTGATCTGATAAAACATCGGAGTGCCATTGAGGCAGATTCTGTTGTTCTTGAAATCAGCAACCTCGTTTTGAGACGCTG ACAAGCTGGCCAGGTGCGGC
Downstream 100 bases:
>100_bases CATTTGCGGACTGTATGGAGTAATATCTTATGAGTGATGATCTTTCGAAGCGTCGATTGGGGCGCGGTCTTGCCGCATTG ATTGGTGAAATGGATCAGCC
Product: chromosome partitioning protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTFEKNRIIAVANQKGGVGKTTTAINLATALAAIGERVLIIDLDPQGNASTGLGIDRKERKLSSYDLLVGEHGIAEVAVP TAVPNLDIVPSTMDLLGFEMQVANVANRVFLLRAAMETPEARGYSYILVDCPPSFNLLTMNAMTAAHSVLVPLQCEFFAL EGLSQLLDTVSQIRGSVNPQLDIQGIVLTMFDARNNLAQQVVSDVRSHLGEKVYHTLIPRNVRVSEAPSYGKPAILYDLK CAGSQAYLQLASEVIQRERLRKAA
Sequences:
>Translated_264_residues MTFEKNRIIAVANQKGGVGKTTTAINLATALAAIGERVLIIDLDPQGNASTGLGIDRKERKLSSYDLLVGEHGIAEVAVP TAVPNLDIVPSTMDLLGFEMQVANVANRVFLLRAAMETPEARGYSYILVDCPPSFNLLTMNAMTAAHSVLVPLQCEFFAL EGLSQLLDTVSQIRGSVNPQLDIQGIVLTMFDARNNLAQQVVSDVRSHLGEKVYHTLIPRNVRVSEAPSYGKPAILYDLK CAGSQAYLQLASEVIQRERLRKAA >Mature_263_residues TFEKNRIIAVANQKGGVGKTTTAINLATALAAIGERVLIIDLDPQGNASTGLGIDRKERKLSSYDLLVGEHGIAEVAVPT AVPNLDIVPSTMDLLGFEMQVANVANRVFLLRAAMETPEARGYSYILVDCPPSFNLLTMNAMTAAHSVLVPLQCEFFALE GLSQLLDTVSQIRGSVNPQLDIQGIVLTMFDARNNLAQQVVSDVRSHLGEKVYHTLIPRNVRVSEAPSYGKPAILYDLKC AGSQAYLQLASEVIQRERLRKAA
Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 28617; Mature: 28486
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFEKNRIIAVANQKGGVGKTTTAINLATALAAIGERVLIIDLDPQGNASTGLGIDRKER CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHH KLSSYDLLVGEHGIAEVAVPTAVPNLDIVPSTMDLLGFEMQVANVANRVFLLRAAMETPE HHCHHEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ARGYSYILVDCPPSFNLLTMNAMTAAHSVLVPLQCEFFALEGLSQLLDTVSQIRGSVNPQ CCCEEEEEEECCCCCCEEEEHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCC LDIQGIVLTMFDARNNLAQQVVSDVRSHLGEKVYHTLIPRNVRVSEAPSYGKPAILYDLK EEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEEEE CAGSQAYLQLASEVIQRERLRKAA CCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TFEKNRIIAVANQKGGVGKTTTAINLATALAAIGERVLIIDLDPQGNASTGLGIDRKER CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHH KLSSYDLLVGEHGIAEVAVPTAVPNLDIVPSTMDLLGFEMQVANVANRVFLLRAAMETPE HHCHHEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ARGYSYILVDCPPSFNLLTMNAMTAAHSVLVPLQCEFFALEGLSQLLDTVSQIRGSVNPQ CCCEEEEEEECCCCCCEEEEHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCC LDIQGIVLTMFDARNNLAQQVVSDVRSHLGEKVYHTLIPRNVRVSEAPSYGKPAILYDLK EEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEEEE CAGSQAYLQLASEVIQRERLRKAA CCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9054507 [H]