Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is uxaB [H]
Identifier: 15890060
GI number: 15890060
Start: 2816031
End: 2817164
Strand: Reverse
Name: uxaB [H]
Synonym: Atu2813
Alternate gene names: 15890060
Gene position: 2817164-2816031 (Counterclockwise)
Preceding gene: 15890061
Following gene: 159185393
Centisome position: 99.14
GC content: 60.76
Gene sequence:
>1134_bases ATGACACCCGATACGCCCATCCTGCAATTCGGCACCAGCCGTTTTCTTCTCGCCCATGCGGATCTGTTCGTTTCGCAGGC GCTCGATAGTGGCGAGGCGCTGGGCCGCATTGCAATCGTCCAGACGACCGGCAATGCCGAGAGCCTGAAGCGCGTTGCGG CGCTGAACAGCGGCGCACCCTACCCCGTGCGTATTCGCGGTATCAGCGATGGGCAGGAAGTTGACGAGGAAATTCAGGGC AAGGCAGTCGCGCGGGCTTTGACCGCCGCGACCGATTGGGCCGAGGTGCGCCGTCTCGCCTGTGTGGTCGAGGTCATTCT GTCCAACACGGGCGATCGCGGTTATGAGCTGGATTCGGGCGACGGACCCGAGCTTGCCGCCGATTTCACCATCGTGCCGA AAAGCTTTCCGGCGAAGCTTTGCATGCTGCTGCTGGAGCGTTTTGAGCTTAATCCCGAAGCGCCCGTCTCGATTTTCCCC TGCGAGCTCGTGCCGCGCAACGGCGAAAAGCTGAGCCAAGTCATTCGCCGGCTTGCAGACGAATGGCAATTGCCGGCGGG TTTTGCCTTCTATCTGAATGAGAAGTGCCGTTTCGCCAATAGTCTGGTGGACCGCATCGTCTCCGAGCCGATCGATCCTG TCGGCGCCGTGGCGGAACCCTATGCACTCTGGGCGATCGAGAAACAGGAAGGTCTCGTCCTTCCCTGTACCCACCCCGCG GTGGTGCTGACAGATGATCTCGACCACTATGAAAAACTGAAGTTGTTCCTGCTCAATCTCGGTCACTCCTATCTGGCGGA GCGCTGGGTGCAGGATGCACGCTCGAAGGGAGAGACGGTGCGGCAGGCCATGGCCGACGACGCTCTGGTGGCGGATATGG AAGCGCTCTGGCACGACGAGGTTCTGCCGGTCTTTGCAGCTGAAGGCATGGGAGACGAGGCGAAAGCCTATATCGGCCTG TTGCGGGAGCGTTTGCGCAATCCCTTTCTCGCGCATCGCCTTGCCGATATCGCCGGCAACCATGACGAAAAGAAGCGCCG CCGTTTTGCCCCGGTCATTGCCGCCGCCGAAAGGCTGGAATTGAAGTTGCCGCAGTCGAAGCTGCGTGCGGCGCTTGCCG CCATCAAGCAATAA
Upstream 100 bases:
>100_bases CACTAATCACCCATCGCATGACACTTGCCGATGTTCCCTCGAAGTTCGCCGGCCTGACCGATCCGAAAGCCGGAGTCATC AAGGGCATGGTGGAGGTCGC
Downstream 100 bases:
>100_bases TGGAGTTTTTCATGCAGCGCATGGGCATGGTCATCGGCGTCAAGCCTGAGATGATCGCGGAATATAAAAGGCTGCACGCC GCGGTCTGGCCGGAGGTTCT
Product: altronate oxidoreductase
Products: NA
Alternate protein names: Tagaturonate dehydrogenase; Tagaturonate reductase [H]
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MTPDTPILQFGTSRFLLAHADLFVSQALDSGEALGRIAIVQTTGNAESLKRVAALNSGAPYPVRIRGISDGQEVDEEIQG KAVARALTAATDWAEVRRLACVVEVILSNTGDRGYELDSGDGPELAADFTIVPKSFPAKLCMLLLERFELNPEAPVSIFP CELVPRNGEKLSQVIRRLADEWQLPAGFAFYLNEKCRFANSLVDRIVSEPIDPVGAVAEPYALWAIEKQEGLVLPCTHPA VVLTDDLDHYEKLKLFLLNLGHSYLAERWVQDARSKGETVRQAMADDALVADMEALWHDEVLPVFAAEGMGDEAKAYIGL LRERLRNPFLAHRLADIAGNHDEKKRRRFAPVIAAAERLELKLPQSKLRAALAAIKQ
Sequences:
>Translated_377_residues MTPDTPILQFGTSRFLLAHADLFVSQALDSGEALGRIAIVQTTGNAESLKRVAALNSGAPYPVRIRGISDGQEVDEEIQG KAVARALTAATDWAEVRRLACVVEVILSNTGDRGYELDSGDGPELAADFTIVPKSFPAKLCMLLLERFELNPEAPVSIFP CELVPRNGEKLSQVIRRLADEWQLPAGFAFYLNEKCRFANSLVDRIVSEPIDPVGAVAEPYALWAIEKQEGLVLPCTHPA VVLTDDLDHYEKLKLFLLNLGHSYLAERWVQDARSKGETVRQAMADDALVADMEALWHDEVLPVFAAEGMGDEAKAYIGL LRERLRNPFLAHRLADIAGNHDEKKRRRFAPVIAAAERLELKLPQSKLRAALAAIKQ >Mature_376_residues TPDTPILQFGTSRFLLAHADLFVSQALDSGEALGRIAIVQTTGNAESLKRVAALNSGAPYPVRIRGISDGQEVDEEIQGK AVARALTAATDWAEVRRLACVVEVILSNTGDRGYELDSGDGPELAADFTIVPKSFPAKLCMLLLERFELNPEAPVSIFPC ELVPRNGEKLSQVIRRLADEWQLPAGFAFYLNEKCRFANSLVDRIVSEPIDPVGAVAEPYALWAIEKQEGLVLPCTHPAV VLTDDLDHYEKLKLFLLNLGHSYLAERWVQDARSKGETVRQAMADDALVADMEALWHDEVLPVFAAEGMGDEAKAYIGLL RERLRNPFLAHRLADIAGNHDEKKRRRFAPVIAAAERLELKLPQSKLRAALAAIKQ
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family. UxaB subfamily [H]
Homologues:
Organism=Escherichia coli, GI48994885, Length=396, Percent_Identity=30.050505050505, Blast_Score=129, Evalue=5e-31, Organism=Escherichia coli, GI1788497, Length=374, Percent_Identity=24.5989304812834, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790028, Length=243, Percent_Identity=27.5720164609054, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR013118 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: =1.1.1.58 [H]
Molecular weight: Translated: 41553; Mature: 41422
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDTPILQFGTSRFLLAHADLFVSQALDSGEALGRIAIVQTTGNAESLKRVAALNSGAP CCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCC YPVRIRGISDGQEVDEEIQGKAVARALTAATDWAEVRRLACVVEVILSNTGDRGYELDSG CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DGPELAADFTIVPKSFPAKLCMLLLERFELNPEAPVSIFPCELVPRNGEKLSQVIRRLAD CCCCCEECEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH EWQLPAGFAFYLNEKCRFANSLVDRIVSEPIDPVGAVAEPYALWAIEKQEGLVLPCTHPA HCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEECCCCEEEECCCCC VVLTDDLDHYEKLKLFLLNLGHSYLAERWVQDARSKGETVRQAMADDALVADMEALWHDE EEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VLPVFAAEGMGDEAKAYIGLLRERLRNPFLAHRLADIAGNHDEKKRRRFAPVIAAAERLE CHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LKLPQSKLRAALAAIKQ HCCCHHHHHHHHHHHCC >Mature Secondary Structure TPDTPILQFGTSRFLLAHADLFVSQALDSGEALGRIAIVQTTGNAESLKRVAALNSGAP CCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCC YPVRIRGISDGQEVDEEIQGKAVARALTAATDWAEVRRLACVVEVILSNTGDRGYELDSG CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DGPELAADFTIVPKSFPAKLCMLLLERFELNPEAPVSIFPCELVPRNGEKLSQVIRRLAD CCCCCEECEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH EWQLPAGFAFYLNEKCRFANSLVDRIVSEPIDPVGAVAEPYALWAIEKQEGLVLPCTHPA HCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEECCCCEEEECCCCC VVLTDDLDHYEKLKLFLLNLGHSYLAERWVQDARSKGETVRQAMADDALVADMEALWHDE EEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VLPVFAAEGMGDEAKAYIGLLRERLRNPFLAHRLADIAGNHDEKKRRRFAPVIAAAERLE CHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LKLPQSKLRAALAAIKQ HCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]