Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is ilvA [H]
Identifier: 15889984
GI number: 15889984
Start: 2730631
End: 2731605
Strand: Reverse
Name: ilvA [H]
Synonym: Atu2735
Alternate gene names: 15889984
Gene position: 2731605-2730631 (Counterclockwise)
Preceding gene: 15889985
Following gene: 159185355
Centisome position: 96.13
GC content: 61.74
Gene sequence:
>975_bases ATGACAGATATTTCGATGATCGAGGCGGCGCGTGAGCGCATCGGCAACCATGCGGTGCGAACACCGCTGCTCACCTCGCC TTTTCTGGACGAGATCGCCGGGCGAAAGCTGTTCGTTAAGGCGGAATGCCTGCAAAGGACGGGATCCTTCAAGTTTCGCG GCGGCTGGTCGGCGGTATCCGGCCTGCCGGCGGATGTGCGCGCCAAGGGTGTGATCGCTTTTTCCTCCGGCAACCATGCG CAGGGCGTGGCGCTCGCGGCCCGCCTGCATGGCATTCCCGCCGTCATCATCATGCCTTCGGATGCGCCGAAGATCAAAAT CGACAATACCCGCGCCTATGGCGCCGAGGTGGTGCTTTACGACCGGGCGAATGAAGACCGTGACGCCATTGGCAACCGGT TGTCGAGCGAGCGCGGTTTGACCCTGATCAGGCCTTACGATGAACCGCTGGTGATTGCGGGGCAGGGGACCGCTGGGCTG GAAATCGCTGAGCAAGGCGCCGAACTCGGTATCGGTGCTGCCGAGGTTCTGGTGCCTTGCGGTGGCGGCGGCCTCACCTC CGGCATCTCTCTTGCACTCGATGCGAAAGCGCGAAATTATAAGGTCAGGACGGCAGAACCGGAGCGTTTCGATGACGTGG CGCGCTCCCTTGCGGCGGGCAAGATCGAGCGGAATGCGACGACATCGGGTTCGATCTGTGATGCAATCGTCACGCCGCAG CCTGGCAATATCACCTTTCCCATCATGGCAGGGCTTTGCGGGAAAGGTATCGCCGTCAGCGAGGAGGAAGCGCTGCGGGC CATGGTTCTCGCCTTCAACCGGCTGAAGGTCGTTATCGAGCCGGGTGGTGCTGTTGCGCTTGCCGCAGCGCTTTTTCATG GCAAGGAACTGGAAAGCGAAACCGTGATTGCGGTTGCCTCCGGCGGCAATGTCGATCCCGGGATCATGGCCGACGCTCTG TCACGCTTCGGTTGA
Upstream 100 bases:
>100_bases AGGACCGGGGATTTTTCTTTTGGAGGCGGTTTCGCATTTGATCACGACCTCCTAATGTAGCCTGAGATTCCGCATTAGAT CCGCTTACCGGGGGCAGGGC
Downstream 100 bases:
>100_bases TATCAGGCCTCCAACCGTGCGGCGATCTCGCCGGCAATCGCCAGAGACGCGGTCAGGCCGGGACTTTCTATTCCGAACAG ATTGACGAGGCCGGGAAAAC
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTDISMIEAARERIGNHAVRTPLLTSPFLDEIAGRKLFVKAECLQRTGSFKFRGGWSAVSGLPADVRAKGVIAFSSGNHA QGVALAARLHGIPAVIIMPSDAPKIKIDNTRAYGAEVVLYDRANEDRDAIGNRLSSERGLTLIRPYDEPLVIAGQGTAGL EIAEQGAELGIGAAEVLVPCGGGGLTSGISLALDAKARNYKVRTAEPERFDDVARSLAAGKIERNATTSGSICDAIVTPQ PGNITFPIMAGLCGKGIAVSEEEALRAMVLAFNRLKVVIEPGGAVALAAALFHGKELESETVIAVASGGNVDPGIMADAL SRFG
Sequences:
>Translated_324_residues MTDISMIEAARERIGNHAVRTPLLTSPFLDEIAGRKLFVKAECLQRTGSFKFRGGWSAVSGLPADVRAKGVIAFSSGNHA QGVALAARLHGIPAVIIMPSDAPKIKIDNTRAYGAEVVLYDRANEDRDAIGNRLSSERGLTLIRPYDEPLVIAGQGTAGL EIAEQGAELGIGAAEVLVPCGGGGLTSGISLALDAKARNYKVRTAEPERFDDVARSLAAGKIERNATTSGSICDAIVTPQ PGNITFPIMAGLCGKGIAVSEEEALRAMVLAFNRLKVVIEPGGAVALAAALFHGKELESETVIAVASGGNVDPGIMADAL SRFG >Mature_323_residues TDISMIEAARERIGNHAVRTPLLTSPFLDEIAGRKLFVKAECLQRTGSFKFRGGWSAVSGLPADVRAKGVIAFSSGNHAQ GVALAARLHGIPAVIIMPSDAPKIKIDNTRAYGAEVVLYDRANEDRDAIGNRLSSERGLTLIRPYDEPLVIAGQGTAGLE IAEQGAELGIGAAEVLVPCGGGGLTSGISLALDAKARNYKVRTAEPERFDDVARSLAAGKIERNATTSGSICDAIVTPQP GNITFPIMAGLCGKGIAVSEEEALRAMVLAFNRLKVVIEPGGAVALAAALFHGKELESETVIAVASGGNVDPGIMADALS RFG
Specific function: Acts on both serine and threonine, and properly considered as a hydroxy amino acid deaminase [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=312, Percent_Identity=38.4615384615385, Blast_Score=196, Evalue=2e-50, Organism=Escherichia coli, GI1789505, Length=311, Percent_Identity=37.620578778135, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI1790207, Length=294, Percent_Identity=33.6734693877551, Blast_Score=127, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17508781, Length=316, Percent_Identity=32.2784810126582, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI71991565, Length=321, Percent_Identity=34.5794392523364, Blast_Score=134, Evalue=7e-32, Organism=Caenorhabditis elegans, GI17537387, Length=322, Percent_Identity=33.2298136645963, Blast_Score=110, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6322631, Length=303, Percent_Identity=42.9042904290429, Blast_Score=213, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6320930, Length=287, Percent_Identity=35.5400696864112, Blast_Score=125, Evalue=9e-30, Organism=Saccharomyces cerevisiae, GI6319788, Length=311, Percent_Identity=24.4372990353698, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI21355833, Length=305, Percent_Identity=31.4754098360656, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI24645328, Length=227, Percent_Identity=29.0748898678414, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005789 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 33727; Mature: 33596
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDISMIEAARERIGNHAVRTPLLTSPFLDEIAGRKLFVKAECLQRTGSFKFRGGWSAVS CCCHHHHHHHHHHHCCHHHCCCCCCCHHHHHHCCCEEEEEEHHHHHCCCEEECCCCHHHC GLPADVRAKGVIAFSSGNHAQGVALAARLHGIPAVIIMPSDAPKIKIDNTRAYGAEVVLY CCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCEEEEEE DRANEDRDAIGNRLSSERGLTLIRPYDEPLVIAGQGTAGLEIAEQGAELGIGAAEVLVPC ECCCCCHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCHHHHHCCCCCCCCHHHEEEEC GGGGLTSGISLALDAKARNYKVRTAEPERFDDVARSLAAGKIERNATTSGSICDAIVTPQ CCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC PGNITFPIMAGLCGKGIAVSEEEALRAMVLAFNRLKVVIEPGGAVALAAALFHGKELESE CCCEEHHHHHCCCCCCCEECHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCCCCC TVIAVASGGNVDPGIMADALSRFG EEEEEECCCCCCCHHHHHHHHHCC >Mature Secondary Structure TDISMIEAARERIGNHAVRTPLLTSPFLDEIAGRKLFVKAECLQRTGSFKFRGGWSAVS CCHHHHHHHHHHHCCHHHCCCCCCCHHHHHHCCCEEEEEEHHHHHCCCEEECCCCHHHC GLPADVRAKGVIAFSSGNHAQGVALAARLHGIPAVIIMPSDAPKIKIDNTRAYGAEVVLY CCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCEEEEEE DRANEDRDAIGNRLSSERGLTLIRPYDEPLVIAGQGTAGLEIAEQGAELGIGAAEVLVPC ECCCCCHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCHHHHHCCCCCCCCHHHEEEEC GGGGLTSGISLALDAKARNYKVRTAEPERFDDVARSLAAGKIERNATTSGSICDAIVTPQ CCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC PGNITFPIMAGLCGKGIAVSEEEALRAMVLAFNRLKVVIEPGGAVALAAALFHGKELESE CCCEEHHHHHCCCCCCCEECHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCCCCC TVIAVASGGNVDPGIMADALSRFG EEEEEECCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA