Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 15889885

Identifier: 15889885

GI number: 15889885

Start: 2614370

End: 2614903

Strand: Reverse

Name: 15889885

Synonym: Atu2630

Alternate gene names: NA

Gene position: 2614903-2614370 (Counterclockwise)

Preceding gene: 159185301

Following gene: 159185300

Centisome position: 92.02

GC content: 61.05

Gene sequence:

>534_bases
ATGGTGGCCCTTGCCGCACCGGGCGGCTGGGGTACAGAGATGCGAAACAACGAAGACATATTGCCGGGCGCCGACTGGTG
CGATCGCTTTCAGGGAGAGATGATGACACCGGGAATGAGCTCGCTCGACGTGAGCAGGCTCCTTTTCGATCATCCTCCGG
CATGGATTAGCGGGCTGATGGCACTTCGAAACCGCGTCGTTTCGCTTTTTGGGTTAAAAACAGTCGAGTTGGTAGCTGGC
GCTTCGGCGGGCGGATTTCCGGTCCTGTCCTCCAGCCGGGAGCAGACCGTGCTGGGCTTCGATGACCGCCATCTCGATTT
CCGGATCGTCGTTGACCTGGAAGAACAGGAATGCCGCCAGCTGGTGAGTGTCACCACCCTCGTGCGGCGCAAGAACCTGT
TCGGGCGGCTCTATCTTTTTGCCGTCGGACCGTTTCACCGCCGTATCGTGCCGGCGACCATGCGGCCGTTCTGCACCGAT
GTCCGGCCTGTCAGCACCGAGACTGCGTGGTTCAGTCGACCCGCGTCAGGGTGA

Upstream 100 bases:

>100_bases
TTCACCAGTTCTACTGGCGCACCAATGTCCTGAAGCGCATGACGCACGGCTAGGGTCTGAGCGGCGGTTTGTCGCGTTTT
CGGTTCGACGGAAAAAGACG

Downstream 100 bases:

>100_bases
AGCCCTCTGCGCGCAGCAGTTCGACAAGGCCTTCCTCGCCGGGCAGATGCAGTGCGCCGACGGCCATGAAGACATTGCCC
TTGGCAAGCTCGGGGGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MVALAAPGGWGTEMRNNEDILPGADWCDRFQGEMMTPGMSSLDVSRLLFDHPPAWISGLMALRNRVVSLFGLKTVELVAG
ASAGGFPVLSSSREQTVLGFDDRHLDFRIVVDLEEQECRQLVSVTTLVRRKNLFGRLYLFAVGPFHRRIVPATMRPFCTD
VRPVSTETAWFSRPASG

Sequences:

>Translated_177_residues
MVALAAPGGWGTEMRNNEDILPGADWCDRFQGEMMTPGMSSLDVSRLLFDHPPAWISGLMALRNRVVSLFGLKTVELVAG
ASAGGFPVLSSSREQTVLGFDDRHLDFRIVVDLEEQECRQLVSVTTLVRRKNLFGRLYLFAVGPFHRRIVPATMRPFCTD
VRPVSTETAWFSRPASG
>Mature_177_residues
MVALAAPGGWGTEMRNNEDILPGADWCDRFQGEMMTPGMSSLDVSRLLFDHPPAWISGLMALRNRVVSLFGLKTVELVAG
ASAGGFPVLSSSREQTVLGFDDRHLDFRIVVDLEEQECRQLVSVTTLVRRKNLFGRLYLFAVGPFHRRIVPATMRPFCTD
VRPVSTETAWFSRPASG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19657; Mature: 19657

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVALAAPGGWGTEMRNNEDILPGADWCDRFQGEMMTPGMSSLDVSRLLFDHPPAWISGLM
CEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHH
ALRNRVVSLFGLKTVELVAGASAGGFPVLSSSREQTVLGFDDRHLDFRIVVDLEEQECRQ
HHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCHHHHHH
LVSVTTLVRRKNLFGRLYLFAVGPFHRRIVPATMRPFCTDVRPVSTETAWFSRPASG
HHHHHHHHHHHHHHHEEEEEEECCHHHHCCCCHHCHHHCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MVALAAPGGWGTEMRNNEDILPGADWCDRFQGEMMTPGMSSLDVSRLLFDHPPAWISGLM
CEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHH
ALRNRVVSLFGLKTVELVAGASAGGFPVLSSSREQTVLGFDDRHLDFRIVVDLEEQECRQ
HHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCHHHHHH
LVSVTTLVRRKNLFGRLYLFAVGPFHRRIVPATMRPFCTDVRPVSTETAWFSRPASG
HHHHHHHHHHHHHHHEEEEEEECCHHHHCCCCHHCHHHCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA