Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is modE [H]
Identifier: 15889822
GI number: 15889822
Start: 2536467
End: 2536862
Strand: Reverse
Name: modE [H]
Synonym: Atu2564
Alternate gene names: 15889822
Gene position: 2536862-2536467 (Counterclockwise)
Preceding gene: 159185269
Following gene: 15889817
Centisome position: 89.28
GC content: 60.1
Gene sequence:
>396_bases ATGAGCGAGAAACGCCTGCCACTGAAACCCGTTCTCCGCATCGATTTTCCACCCGGAGAGCGTCTGGGGCACGGCAAGGT CGAGTTGATGCAATTGATTGCCGAGACCGGATCGATCTCCGCCGCCGGTCGGGCAATGGACATGTCCTATCGACGCGCAT GGCTGCTGGTAGATGCGCTGAACCACATGTTCAGGCAGCCGGTGATCTGTTCCCAGCGTGGGGGCAAGCAGGGTGGCGGC GCAGCACTGACTGTCTTCGGCGCCGAATTGCTGGAACGTTATCGTGGCATGGAAGAGCGGATGAACGAGGCCCTGCGCGA GGATATCGACTGGCTGGAGGCCAACCGCAACCCGCAAGATGCGCTCAATAGGGATCGAGAGCCGCCGACTTTATAA
Upstream 100 bases:
>100_bases GGCGCGGGCGGTGGCGCGCGGCGTCTATGAGGCGACGGCGTTACCTGTGGATGGGGCGCAGAGGGCCTATCGTGACATTC ATGGCCGGGGTTTTTGAACC
Downstream 100 bases:
>100_bases TCGCATGAACCGGTTTGCCGGGTTCCAGATGCAGCCGCTCGCGGGAGAGGTCGGTGATGCGCGACTGGATAATATCGCCG CCGCAATCCATCTGTATCGT
Product: molybdenum-binding transcriptional repressor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSEKRLPLKPVLRIDFPPGERLGHGKVELMQLIAETGSISAAGRAMDMSYRRAWLLVDALNHMFRQPVICSQRGGKQGGG AALTVFGAELLERYRGMEERMNEALREDIDWLEANRNPQDALNRDREPPTL
Sequences:
>Translated_131_residues MSEKRLPLKPVLRIDFPPGERLGHGKVELMQLIAETGSISAAGRAMDMSYRRAWLLVDALNHMFRQPVICSQRGGKQGGG AALTVFGAELLERYRGMEERMNEALREDIDWLEANRNPQDALNRDREPPTL >Mature_130_residues SEKRLPLKPVLRIDFPPGERLGHGKVELMQLIAETGSISAAGRAMDMSYRRAWLLVDALNHMFRQPVICSQRGGKQGGGA ALTVFGAELLERYRGMEERMNEALREDIDWLEANRNPQDALNRDREPPTL
Specific function: Involved in the transport of molybdenum into the cell. May have a role in the early intracellular capture or metabolism of molybdenum [H]
COG id: COG2005
COG function: function code R; N-terminal domain of molybdenum-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the modE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000847 - InterPro: IPR004606 - InterPro: IPR008995 - InterPro: IPR003725 - InterPro: IPR016462 - InterPro: IPR005116 - InterPro: IPR011991 [H]
Pfam domain/function: PF00126 HTH_1; PF03459 TOBE [H]
EC number: NA
Molecular weight: Translated: 14801; Mature: 14670
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKRLPLKPVLRIDFPPGERLGHGKVELMQLIAETGSISAAGRAMDMSYRRAWLLVDAL CCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH NHMFRQPVICSQRGGKQGGGAALTVFGAELLERYRGMEERMNEALREDIDWLEANRNPQD HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHH ALNRDREPPTL HHHCCCCCCCC >Mature Secondary Structure SEKRLPLKPVLRIDFPPGERLGHGKVELMQLIAETGSISAAGRAMDMSYRRAWLLVDAL CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH NHMFRQPVICSQRGGKQGGGAALTVFGAELLERYRGMEERMNEALREDIDWLEANRNPQD HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHH ALNRDREPPTL HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8384683; 7665518 [H]