Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889633
Identifier: 15889633
GI number: 15889633
Start: 2333226
End: 2333630
Strand: Reverse
Name: 15889633
Synonym: Atu2359
Alternate gene names: NA
Gene position: 2333630-2333226 (Counterclockwise)
Preceding gene: 159185172
Following gene: 159185169
Centisome position: 82.12
GC content: 58.52
Gene sequence:
>405_bases ATGAGGATCATGTTCGAGAGATTGTCCAGCGGCTTGCGTTTCCTCTCACGCGGTACAGCCATCATCGCCGCGACCCAGAT AGTGGGCGCAAACTCTAACCCGGCGCTGGCTTTCGACGCGGAATCCCGTGCCTTATGGGGTGCCTCGGCGATGGCGGAGG CGGATTATCACCGCAACAACCCCTGTGCGCAGTGGACGGTTGACGAACAGGCGGTCAAGAAAGTCATCGCCTGGAGCGGT CAAACGCTCGCGCAACTGCGTGCATCCGATGATTATCGGGAACAGCGGGAAGCCATAAAGGGTGTGGTTCAGCAATATGG TATCGACATGGCCTGTGATGCGGGTGGTGCCAATTTCGCTGTCGGCGACCATGATTATGGCGTTCTGCGCCATGTCGGCT GGTGA
Upstream 100 bases:
>100_bases CCGGCAGGCTTGGAGACATACCGCGCAGGTTTTATTCCTGCGCGGTATTTATGGGCACCATCGATTCGGGATCGTTGGTC TCCGGTACGCTTCAAAATGG
Downstream 100 bases:
>100_bases GCCGTCGTCATAAGACCCCCGACAAATCCTTAAGTCAACGCATCGATACGGCCTGGTCCTGCCGGCGCGGCCTGCCGCCA TAGCCACGTCTGAAAAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MRIMFERLSSGLRFLSRGTAIIAATQIVGANSNPALAFDAESRALWGASAMAEADYHRNNPCAQWTVDEQAVKKVIAWSG QTLAQLRASDDYREQREAIKGVVQQYGIDMACDAGGANFAVGDHDYGVLRHVGW
Sequences:
>Translated_134_residues MRIMFERLSSGLRFLSRGTAIIAATQIVGANSNPALAFDAESRALWGASAMAEADYHRNNPCAQWTVDEQAVKKVIAWSG QTLAQLRASDDYREQREAIKGVVQQYGIDMACDAGGANFAVGDHDYGVLRHVGW >Mature_134_residues MRIMFERLSSGLRFLSRGTAIIAATQIVGANSNPALAFDAESRALWGASAMAEADYHRNNPCAQWTVDEQAVKKVIAWSG QTLAQLRASDDYREQREAIKGVVQQYGIDMACDAGGANFAVGDHDYGVLRHVGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14633; Mature: 14633
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIMFERLSSGLRFLSRGTAIIAATQIVGANSNPALAFDAESRALWGASAMAEADYHRNN CCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEECCCCCHHCHHHHHHHHHCCCC PCAQWTVDEQAVKKVIAWSGQTLAQLRASDDYREQREAIKGVVQQYGIDMACDAGGANFA CCCEEEECHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCCEEE VGDHDYGVLRHVGW ECCCCCHHHHCCCC >Mature Secondary Structure MRIMFERLSSGLRFLSRGTAIIAATQIVGANSNPALAFDAESRALWGASAMAEADYHRNN CCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEECCCCCHHCHHHHHHHHHCCCC PCAQWTVDEQAVKKVIAWSGQTLAQLRASDDYREQREAIKGVVQQYGIDMACDAGGANFA CCCEEEECHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCCEEE VGDHDYGVLRHVGW ECCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA