Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 15889628

Identifier: 15889628

GI number: 15889628

Start: 2328585

End: 2328848

Strand: Reverse

Name: 15889628

Synonym: Atu2352

Alternate gene names: NA

Gene position: 2328848-2328585 (Counterclockwise)

Preceding gene: 15889630

Following gene: 15889625

Centisome position: 81.96

GC content: 57.95

Gene sequence:

>264_bases
ATGCTGAATATCGATACGAGTCACCCGCTTTATCGCCCGCTATGGGTCCGGTTGCTCATCGTCGGCTTTTGCGCCGCATG
GGCCGTCATCGAATTCGTCAATCGCGAGTTTTTCTGGGGAACCATCGTCGGTGGCGTCGGCGCTTATGCGGCCTATGAAT
TGCTGCTGAAGTTCAAACCTGCGAGTAACGCCGCTGTGTCCAAGGATGGAGCAGAGGAGCCTGCCGCCGAAAGCGCGCCC
ACTGACAAGAACGATGCGGGCTGA

Upstream 100 bases:

>100_bases
ATTTGCCTGTGAAACCGCCAAGACGCATGGATATCTTCGCGCCCTGCGGCACGAAGCCGCGACCATGCGATCGACTGGAA
AGGCCAGAGACCGGAACGCC

Downstream 100 bases:

>100_bases
AGCGGCCTCTATCTTCGGTTTGAAGCATTTCCCGTATTAATCTCACCGCCCGTTTTCAGCGGAAATGCTCGCGGGTCCGC
AGCATGCGAAGCGCCTGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MLNIDTSHPLYRPLWVRLLIVGFCAAWAVIEFVNREFFWGTIVGGVGAYAAYELLLKFKPASNAAVSKDGAEEPAAESAP
TDKNDAG

Sequences:

>Translated_87_residues
MLNIDTSHPLYRPLWVRLLIVGFCAAWAVIEFVNREFFWGTIVGGVGAYAAYELLLKFKPASNAAVSKDGAEEPAAESAP
TDKNDAG
>Mature_87_residues
MLNIDTSHPLYRPLWVRLLIVGFCAAWAVIEFVNREFFWGTIVGGVGAYAAYELLLKFKPASNAAVSKDGAEEPAAESAP
TDKNDAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9430; Mature: 9430

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNIDTSHPLYRPLWVRLLIVGFCAAWAVIEFVNREFFWGTIVGGVGAYAAYELLLKFKP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC
ASNAAVSKDGAEEPAAESAPTDKNDAG
CCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLNIDTSHPLYRPLWVRLLIVGFCAAWAVIEFVNREFFWGTIVGGVGAYAAYELLLKFKP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC
ASNAAVSKDGAEEPAAESAPTDKNDAG
CCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA