Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is gguC
Identifier: 15889622
GI number: 15889622
Start: 2321718
End: 2322764
Strand: Reverse
Name: gguC
Synonym: Atu2345
Alternate gene names: NA
Gene position: 2322764-2321718 (Counterclockwise)
Preceding gene: 15889623
Following gene: 159185164
Centisome position: 81.74
GC content: 61.99
Gene sequence:
>1047_bases ATGCACCGCGTAGAAGAGACAAGGCGCATTGCGCCGGAGGAAGGAAATCCCGTGCTCATTTCACAGATCAAAGATGCCAG TGGCAACATCACCGTCGCGGTTCGCGAAGAAGGCGGGCAGGCGCGCGCCGTCAAGGGTGCAGCCTCGGTTTATGCGCTCG CCATGGAAGCCGCCAATGGCGGCAAGAGCCTCGCCGATGTCGTATCTGCCCATGGTCTGGGCGACGCCGTCGATCTCGAC AAGGCCTATGCCGAAGGCCGTTTCCTGCCGCCGATCACCCATCCCGATCCGGCGCATCTGCATCTGACCGGCACCGGCCT GACCCATCTCGGCTCTGCCGCGACCCGCGACAGCATGCACAAGAAGACCACGGAAGCCGCCGAAGAAAGCCTGACGGATT CCATGAAGATGTTCCGCATGGGTCTCGAAAACGGCAAGCCGAAGGCTGGCGAAAAGGGCGTTCAGCCCGAGTGGTTCTAC AAGGGCAACGGCCATGTGGCGGCGGCACCGGGTGCGGCTCTCACCTCTCCGTCCTTCGCGCTCGATGGCGGCGAAGAGCC TGAGATGGCGGGCATCTATGTGATTTCCGACAAGGGCGAGGCTGTGCGTATCGGCTTTGCCGTCTCGAACGAGTTTTCCG ACCACGTCACCGAGCGGGTCAACTACCTCTACCTCGCCCATTCCAAGCTGCGCCCGGCCAGCTTCGGCCCGGAAATCCGC GTCGGTGCAGCACCGTCGGATATTCGCGGCACCTCGCGCATCCGTCGCGGCGACAAGGTCATCTTCGAAAAGCCGTTCGT TTCGGGTGAGGACAACATGTCCCACACCTTTGCGAACCTCGAATATCACCACTTCAAATATGGCCTGTTCCGCGCGCCGG GCGACGTGCATGTGCACATGTTCGGCACGGCAACGCTCTCCTTCGCGGAAGGCATCAAGCCGGAAGCGGGTGACGTGTTC GAAATCGAGGCAGCCGGTTTCGGCCTGCCGCTGAAGAACCCGCTGGCGGTGGATTCGGAAGAAGAGATCGTGGTTCGGCA GATCTGA
Upstream 100 bases:
>100_bases TCTTCGACGTCTACAACAAGAACAAGGGCTGATCGGCCCAACTCCTATCGCAGTCAAAAAAGTGGCCGGTTTCCGGCCAC TTTCATAAGATGCAGGTGCA
Downstream 100 bases:
>100_bases TCTGACGGACTGCGTATGACAATGGTCGAGGGTGGGGCGCCCTGCGTCACTCCCCCTCGACGTCATCCTCGGGCTTGTCC CGAGGATCTGCAAGCGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MHRVEETRRIAPEEGNPVLISQIKDASGNITVAVREEGGQARAVKGAASVYALAMEAANGGKSLADVVSAHGLGDAVDLD KAYAEGRFLPPITHPDPAHLHLTGTGLTHLGSAATRDSMHKKTTEAAEESLTDSMKMFRMGLENGKPKAGEKGVQPEWFY KGNGHVAAAPGAALTSPSFALDGGEEPEMAGIYVISDKGEAVRIGFAVSNEFSDHVTERVNYLYLAHSKLRPASFGPEIR VGAAPSDIRGTSRIRRGDKVIFEKPFVSGEDNMSHTFANLEYHHFKYGLFRAPGDVHVHMFGTATLSFAEGIKPEAGDVF EIEAAGFGLPLKNPLAVDSEEEIVVRQI
Sequences:
>Translated_348_residues MHRVEETRRIAPEEGNPVLISQIKDASGNITVAVREEGGQARAVKGAASVYALAMEAANGGKSLADVVSAHGLGDAVDLD KAYAEGRFLPPITHPDPAHLHLTGTGLTHLGSAATRDSMHKKTTEAAEESLTDSMKMFRMGLENGKPKAGEKGVQPEWFY KGNGHVAAAPGAALTSPSFALDGGEEPEMAGIYVISDKGEAVRIGFAVSNEFSDHVTERVNYLYLAHSKLRPASFGPEIR VGAAPSDIRGTSRIRRGDKVIFEKPFVSGEDNMSHTFANLEYHHFKYGLFRAPGDVHVHMFGTATLSFAEGIKPEAGDVF EIEAAGFGLPLKNPLAVDSEEEIVVRQI >Mature_348_residues MHRVEETRRIAPEEGNPVLISQIKDASGNITVAVREEGGQARAVKGAASVYALAMEAANGGKSLADVVSAHGLGDAVDLD KAYAEGRFLPPITHPDPAHLHLTGTGLTHLGSAATRDSMHKKTTEAAEESLTDSMKMFRMGLENGKPKAGEKGVQPEWFY KGNGHVAAAPGAALTSPSFALDGGEEPEMAGIYVISDKGEAVRIGFAVSNEFSDHVTERVNYLYLAHSKLRPASFGPEIR VGAAPSDIRGTSRIRRGDKVIFEKPFVSGEDNMSHTFANLEYHHFKYGLFRAPGDVHVHMFGTATLSFAEGIKPEAGDVF EIEAAGFGLPLKNPLAVDSEEEIVVRQI
Specific function: Unknown
COG id: COG3802
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37271; Mature: 37271
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRVEETRRIAPEEGNPVLISQIKDASGNITVAVREEGGQARAVKGAASVYALAMEAANG CCCCCHHHCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEHHHHHEEEEEEECCCC GKSLADVVSAHGLGDAVDLDKAYAEGRFLPPITHPDPAHLHLTGTGLTHLGSAATRDSMH CHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHCCCHHHHHHHH KKTTEAAEESLTDSMKMFRMGLENGKPKAGEKGVQPEWFYKGNGHVAAAPGAALTSPSFA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCEE LDGGEEPEMAGIYVISDKGEAVRIGFAVSNEFSDHVTERVNYLYLAHSKLRPASFGPEIR ECCCCCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHEEEEEECCCCCCCCCCCCEE VGAAPSDIRGTSRIRRGDKVIFEKPFVSGEDNMSHTFANLEYHHFKYGLFRAPGDVHVHM ECCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCEEEECCEEEEEEEEEEECCCCEEEEE FGTATLSFAEGIKPEAGDVFEIEAAGFGLPLKNPLAVDSEEEIVVRQI EEEEEEHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MHRVEETRRIAPEEGNPVLISQIKDASGNITVAVREEGGQARAVKGAASVYALAMEAANG CCCCCHHHCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEHHHHHEEEEEEECCCC GKSLADVVSAHGLGDAVDLDKAYAEGRFLPPITHPDPAHLHLTGTGLTHLGSAATRDSMH CHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHCCCHHHHHHHH KKTTEAAEESLTDSMKMFRMGLENGKPKAGEKGVQPEWFYKGNGHVAAAPGAALTSPSFA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCEE LDGGEEPEMAGIYVISDKGEAVRIGFAVSNEFSDHVTERVNYLYLAHSKLRPASFGPEIR ECCCCCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHEEEEEECCCCCCCCCCCCEE VGAAPSDIRGTSRIRRGDKVIFEKPFVSGEDNMSHTFANLEYHHFKYGLFRAPGDVHVHM ECCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCEEEECCEEEEEEEEEEECCCCEEEEE FGTATLSFAEGIKPEAGDVFEIEAAGFGLPLKNPLAVDSEEEIVVRQI EEEEEEHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA