| Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
|---|---|
| Accession | NC_003062 |
| Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is rhlE [H]
Identifier: 15889610
GI number: 15889610
Start: 2310614
End: 2312122
Strand: Direct
Name: rhlE [H]
Synonym: Atu2333
Alternate gene names: 15889610
Gene position: 2310614-2312122 (Clockwise)
Preceding gene: 15889608
Following gene: 159185163
Centisome position: 81.31
GC content: 62.23
Gene sequence:
>1509_bases ATGAGTTTGTTTTGGCGCCCCGAAAGGCAATATATATTGACCAGTTTTAACGAACTCGGCCTCTCCGAAAAGATTGTGGC CAGTGTTACCCAGCTTGGCTATACGACCCCTACCCCCATTCAGGCGAAAGCCATTCCGCTGCTGCTCGAAGGCCGTGACC TGATCGGCCTCGCACAGACCGGCACCGGCAAGACGGCCGCTTTCGGGCTGCCGATCATCGAAATGCTGATGAAGCAGGCG GATCGTCCGGCAAATCGCACCACCCGCACGCTGATCCTTGCACCGACCCGCGAACTGGTGAACCAGATCGGCGACAACCT GCGTTCCTTCGTGAAGAAGACGCCGTTGCGCATCAACCAGGTTGTTGGCGGCGCGTCGATCAACAAGCAGCAGCTTCAGC TCGAAAAGGGCACTGACATCCTCGTGGCGACCCCCGGCCGCCTGCTGGACCTCATCGCCCGCAACGCCATCTCGCTCTCG AAGGTGACGTATCTCGTTCTCGACGAAGCCGACCAGATGCTCGATCTCGGCTTCATCCATGATCTGCGCAAGATTTCCCG CATGGTTCCGCCCAAGCGCCAGACGCTGCTGTTTTCGGCCACCATGCCGAAGGCCATTTCCGAGCTTGCCAGCAACTTCC TGACCGACCCGATCAAGGTCGAGGTGACACCTCCGGGCAAGGCTGCCGACAAGGTCGAGCAGTACGTGCATTTCGTCGCC GGCAAGAACGACAAGACCGATCTTTTGAAGAAGTCGCTCAACGAGAACCCGGATGGCCGCTCCATCGTGTTCCTGCGCAC CAAGCACGGCGCGGAGAAGCTTTACAAGCATCTCGAACATATCGGCTTCAAGGTCGCCTCCATTCACGGCAACAAGAGCC AGGGCCAGCGCGAGCGGGCACTGAAGGGCTTCAAGGACGGTGAGATCAAGGTTCTGGTCGCGACCGACGTCGCTGCCCGC GGCATCGATATCCCGGCCGTAACGCACGTCTTCAATTACGACCTCCCGGAAGTGCCGGATGCTTACGTTCACCGCATCGG CCGTACCGCCCGCGCCGGCCGCGACGGCATCGCCATCGCTTTCTGCGCACCGGACGAAACCCGCCTGCTGCACGACATCG AAAAGCTGATGAAGATCGATATCCCGGTTGCGTCTGGCGAACGTCCGGCTGGTCTTGCAAGCCCCACACGCCCCAATAAC AACCGTGGCGGTCGCAACAACAATGGCGGCCAGCCGCGCGGCCCGCGTGAAGGTGGACGTCACAACGGCGAATCCCGCCC GTCCCGCAACCACGCGCCGCGTGATGCGGACAACGATCTGGAAGTAACCTCCGACTTCAAGCGCGTTAAGCAGGCTGAAG GCGACGCAGGCCGCCCGGCCGGCCCGCGCAAGCAGCGCCGCCCCGCCCGCAAGCCCGGCGGCAGCGGCGCCAACCGCCAC GCACCTGCTGGCGGCAACGGCCAGGAAAAGCGTGCTTCCGGCAACGGCAATCGCGGCCGTAACCGCTAA
Upstream 100 bases:
>100_bases AATTGCCGCACTGATGCGCAGAAAGTTATTCCAACCCACAAGTTCCCAATTCACGCGGGGTTCTTGACGCCGAAACCACC GGACAGCAGCACTGCTCCGG
Downstream 100 bases:
>100_bases CTGTTAAGCCAGGGTCGCGGACGCTCGGCATTGCGGCGCTCGCCAATCAAAGCCCCGCAGGCAATCCGCCCGCGGGGTTT TTCTTTGTCTTCAACCGCCC
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 502; Mature: 501
Protein sequence:
>502_residues MSLFWRPERQYILTSFNELGLSEKIVASVTQLGYTTPTPIQAKAIPLLLEGRDLIGLAQTGTGKTAAFGLPIIEMLMKQA DRPANRTTRTLILAPTRELVNQIGDNLRSFVKKTPLRINQVVGGASINKQQLQLEKGTDILVATPGRLLDLIARNAISLS KVTYLVLDEADQMLDLGFIHDLRKISRMVPPKRQTLLFSATMPKAISELASNFLTDPIKVEVTPPGKAADKVEQYVHFVA GKNDKTDLLKKSLNENPDGRSIVFLRTKHGAEKLYKHLEHIGFKVASIHGNKSQGQRERALKGFKDGEIKVLVATDVAAR GIDIPAVTHVFNYDLPEVPDAYVHRIGRTARAGRDGIAIAFCAPDETRLLHDIEKLMKIDIPVASGERPAGLASPTRPNN NRGGRNNNGGQPRGPREGGRHNGESRPSRNHAPRDADNDLEVTSDFKRVKQAEGDAGRPAGPRKQRRPARKPGGSGANRH APAGGNGQEKRASGNGNRGRNR
Sequences:
>Translated_502_residues MSLFWRPERQYILTSFNELGLSEKIVASVTQLGYTTPTPIQAKAIPLLLEGRDLIGLAQTGTGKTAAFGLPIIEMLMKQA DRPANRTTRTLILAPTRELVNQIGDNLRSFVKKTPLRINQVVGGASINKQQLQLEKGTDILVATPGRLLDLIARNAISLS KVTYLVLDEADQMLDLGFIHDLRKISRMVPPKRQTLLFSATMPKAISELASNFLTDPIKVEVTPPGKAADKVEQYVHFVA GKNDKTDLLKKSLNENPDGRSIVFLRTKHGAEKLYKHLEHIGFKVASIHGNKSQGQRERALKGFKDGEIKVLVATDVAAR GIDIPAVTHVFNYDLPEVPDAYVHRIGRTARAGRDGIAIAFCAPDETRLLHDIEKLMKIDIPVASGERPAGLASPTRPNN NRGGRNNNGGQPRGPREGGRHNGESRPSRNHAPRDADNDLEVTSDFKRVKQAEGDAGRPAGPRKQRRPARKPGGSGANRH APAGGNGQEKRASGNGNRGRNR >Mature_501_residues SLFWRPERQYILTSFNELGLSEKIVASVTQLGYTTPTPIQAKAIPLLLEGRDLIGLAQTGTGKTAAFGLPIIEMLMKQAD RPANRTTRTLILAPTRELVNQIGDNLRSFVKKTPLRINQVVGGASINKQQLQLEKGTDILVATPGRLLDLIARNAISLSK VTYLVLDEADQMLDLGFIHDLRKISRMVPPKRQTLLFSATMPKAISELASNFLTDPIKVEVTPPGKAADKVEQYVHFVAG KNDKTDLLKKSLNENPDGRSIVFLRTKHGAEKLYKHLEHIGFKVASIHGNKSQGQRERALKGFKDGEIKVLVATDVAARG IDIPAVTHVFNYDLPEVPDAYVHRIGRTARAGRDGIAIAFCAPDETRLLHDIEKLMKIDIPVASGERPAGLASPTRPNNN RGGRNNNGGQPRGPREGGRHNGESRPSRNHAPRDADNDLEVTSDFKRVKQAEGDAGRPAGPRKQRRPARKPGGSGANRHA PAGGNGQEKRASGNGNRGRNR
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI45446747, Length=361, Percent_Identity=41.2742382271468, Blast_Score=288, Evalue=6e-78, Organism=Homo sapiens, GI45446743, Length=361, Percent_Identity=41.2742382271468, Blast_Score=288, Evalue=6e-78, Organism=Homo sapiens, GI301171467, Length=383, Percent_Identity=43.3420365535248, Blast_Score=288, Evalue=7e-78, Organism=Homo sapiens, GI301171475, Length=383, Percent_Identity=43.3420365535248, Blast_Score=288, Evalue=1e-77, Organism=Homo sapiens, GI87196351, Length=383, Percent_Identity=43.3420365535248, Blast_Score=287, Evalue=1e-77, Organism=Homo sapiens, GI169881239, Length=410, Percent_Identity=40.7317073170732, Blast_Score=283, Evalue=4e-76, Organism=Homo sapiens, GI13514809, Length=410, Percent_Identity=40.7317073170732, Blast_Score=283, Evalue=4e-76, Organism=Homo sapiens, GI41327771, Length=403, Percent_Identity=38.4615384615385, Blast_Score=276, Evalue=4e-74, Organism=Homo sapiens, GI41327773, Length=370, Percent_Identity=40.2702702702703, Blast_Score=273, Evalue=4e-73, Organism=Homo sapiens, GI216548263, Length=359, Percent_Identity=44.2896935933148, Blast_Score=273, Evalue=4e-73, Organism=Homo sapiens, GI13518015, Length=359, Percent_Identity=44.2896935933148, Blast_Score=272, Evalue=5e-73, Organism=Homo sapiens, GI262231852, Length=359, Percent_Identity=44.2896935933148, Blast_Score=272, Evalue=5e-73, Organism=Homo sapiens, GI262118318, Length=358, Percent_Identity=43.5754189944134, Blast_Score=271, Evalue=1e-72, Organism=Homo sapiens, GI21071032, Length=376, Percent_Identity=40.1595744680851, Blast_Score=265, Evalue=6e-71, Organism=Homo sapiens, GI20149629, Length=369, Percent_Identity=39.5663956639566, Blast_Score=264, Evalue=2e-70, Organism=Homo sapiens, GI7661920, Length=379, Percent_Identity=35.8839050131926, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI224593278, Length=379, Percent_Identity=39.0501319261214, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI4758138, Length=375, Percent_Identity=36.5333333333333, Blast_Score=258, Evalue=9e-69, Organism=Homo sapiens, GI148613856, Length=367, Percent_Identity=37.6021798365123, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI38201710, Length=367, Percent_Identity=37.6021798365123, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI31542656, Length=397, Percent_Identity=38.5390428211587, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI222352149, Length=363, Percent_Identity=39.6694214876033, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI55749865, Length=359, Percent_Identity=38.4401114206128, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI51094101, Length=381, Percent_Identity=36.2204724409449, Blast_Score=242, Evalue=7e-64, Organism=Homo sapiens, GI164419743, Length=381, Percent_Identity=36.2204724409449, Blast_Score=242, Evalue=7e-64, Organism=Homo sapiens, GI188035877, Length=396, Percent_Identity=36.8686868686869, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI13129006, Length=376, Percent_Identity=38.563829787234, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI50659095, Length=389, Percent_Identity=37.7892030848329, Blast_Score=230, Evalue=3e-60, Organism=Homo sapiens, GI41327776, Length=369, Percent_Identity=35.7723577235772, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI38327634, Length=366, Percent_Identity=37.431693989071, Blast_Score=212, Evalue=8e-55, Organism=Homo sapiens, GI38569505, Length=370, Percent_Identity=34.5945945945946, Blast_Score=209, Evalue=6e-54, Organism=Homo sapiens, GI164664518, Length=376, Percent_Identity=31.6489361702128, Blast_Score=208, Evalue=9e-54, Organism=Homo sapiens, GI13514831, Length=398, Percent_Identity=33.6683417085427, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI38569503, Length=370, Percent_Identity=34.5945945945946, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI41327779, Length=364, Percent_Identity=35.989010989011, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI83700235, Length=367, Percent_Identity=34.0599455040872, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI4503529, Length=384, Percent_Identity=33.8541666666667, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI21040371, Length=393, Percent_Identity=30.5343511450382, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI17505907, Length=427, Percent_Identity=32.3185011709602, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI4758112, Length=372, Percent_Identity=30.6451612903226, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI18375623, Length=372, Percent_Identity=30.6451612903226, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI6005743, Length=360, Percent_Identity=33.8888888888889, Blast_Score=186, Evalue=6e-47, Organism=Homo sapiens, GI9506931, Length=398, Percent_Identity=31.4070351758794, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI8922886, Length=360, Percent_Identity=33.3333333333333, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI256223453, Length=387, Percent_Identity=31.0077519379845, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI164419732, Length=386, Percent_Identity=33.6787564766839, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI62241022, Length=339, Percent_Identity=33.9233038348083, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI62241024, Length=317, Percent_Identity=33.7539432176656, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI154759257, Length=396, Percent_Identity=31.0606060606061, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI9966805, Length=325, Percent_Identity=34.1538461538462, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI4826686, Length=343, Percent_Identity=30.3206997084548, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI256773275, Length=397, Percent_Identity=28.7153652392947, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI20336298, Length=369, Percent_Identity=30.0813008130081, Blast_Score=136, Evalue=4e-32, Organism=Escherichia coli, GI1787016, Length=369, Percent_Identity=53.3875338753388, Blast_Score=375, Evalue=1e-105, Organism=Escherichia coli, GI87082221, Length=370, Percent_Identity=42.4324324324324, Blast_Score=290, Evalue=1e-79, Organism=Escherichia coli, GI1790214, Length=416, Percent_Identity=41.3461538461538, Blast_Score=283, Evalue=2e-77, Organism=Escherichia coli, GI1787605, Length=371, Percent_Identity=39.8921832884097, Blast_Score=259, Evalue=2e-70, Organism=Escherichia coli, GI1788930, Length=361, Percent_Identity=43.213296398892, Blast_Score=254, Evalue=1e-68, Organism=Escherichia coli, GI48994977, Length=360, Percent_Identity=23.6111111111111, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI32565321, Length=402, Percent_Identity=39.0547263681592, Blast_Score=285, Evalue=4e-77, Organism=Caenorhabditis elegans, GI17510309, Length=380, Percent_Identity=42.6315789473684, Blast_Score=276, Evalue=2e-74, Organism=Caenorhabditis elegans, GI17510307, Length=380, Percent_Identity=42.6315789473684, Blast_Score=276, Evalue=2e-74, Organism=Caenorhabditis elegans, GI71995514, Length=380, Percent_Identity=42.6315789473684, Blast_Score=276, Evalue=2e-74, Organism=Caenorhabditis elegans, GI71995724, Length=390, Percent_Identity=36.1538461538462, Blast_Score=262, Evalue=3e-70, Organism=Caenorhabditis elegans, GI17507121, Length=390, Percent_Identity=35.6410256410256, Blast_Score=260, Evalue=1e-69, Organism=Caenorhabditis elegans, GI17555296, Length=367, Percent_Identity=40.3269754768392, Blast_Score=258, Evalue=4e-69, Organism=Caenorhabditis elegans, GI115533224, Length=397, Percent_Identity=38.7909319899244, Blast_Score=257, Evalue=1e-68, Organism=Caenorhabditis elegans, GI71995718, Length=367, Percent_Identity=40.5994550408719, Blast_Score=256, Evalue=3e-68, Organism=Caenorhabditis elegans, GI17507945, Length=374, Percent_Identity=39.3048128342246, Blast_Score=255, Evalue=3e-68, Organism=Caenorhabditis elegans, GI17510559, Length=388, Percent_Identity=37.6288659793814, Blast_Score=253, Evalue=1e-67, Organism=Caenorhabditis elegans, GI86570094, Length=357, Percent_Identity=38.655462184874, Blast_Score=251, Evalue=9e-67, Organism=Caenorhabditis elegans, GI17552642, Length=411, Percent_Identity=35.2798053527981, Blast_Score=245, Evalue=4e-65, Organism=Caenorhabditis elegans, GI71987143, Length=382, Percent_Identity=33.5078534031414, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17507879, Length=401, Percent_Identity=36.9077306733167, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI71999644, Length=375, Percent_Identity=35.4666666666667, Blast_Score=232, Evalue=4e-61, Organism=Caenorhabditis elegans, GI71999646, Length=375, Percent_Identity=35.4666666666667, Blast_Score=231, Evalue=7e-61, Organism=Caenorhabditis elegans, GI115532548, Length=373, Percent_Identity=38.0697050938338, Blast_Score=231, Evalue=8e-61, Organism=Caenorhabditis elegans, GI115532546, Length=373, Percent_Identity=38.0697050938338, Blast_Score=231, Evalue=9e-61, Organism=Caenorhabditis elegans, GI17507877, Length=377, Percent_Identity=37.4005305039788, Blast_Score=228, Evalue=5e-60, Organism=Caenorhabditis elegans, GI17537549, Length=363, Percent_Identity=36.6391184573003, Blast_Score=226, Evalue=3e-59, Organism=Caenorhabditis elegans, GI17507881, Length=412, Percent_Identity=35.1941747572816, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17505370, Length=351, Percent_Identity=38.1766381766382, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17552114, Length=372, Percent_Identity=31.1827956989247, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI193208216, Length=390, Percent_Identity=31.5384615384615, Blast_Score=201, Evalue=7e-52, Organism=Caenorhabditis elegans, GI71982858, Length=373, Percent_Identity=31.9034852546917, Blast_Score=197, Evalue=8e-51, Organism=Caenorhabditis elegans, GI17509811, Length=373, Percent_Identity=32.9758713136729, Blast_Score=191, Evalue=1e-48, Organism=Caenorhabditis elegans, GI71990816, Length=356, Percent_Identity=35.9550561797753, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI25148203, Length=418, Percent_Identity=29.6650717703349, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=31.8652849740933, Blast_Score=178, Evalue=7e-45, Organism=Caenorhabditis elegans, GI17556951, Length=373, Percent_Identity=31.6353887399464, Blast_Score=175, Evalue=4e-44, Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=32.378223495702, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI32564046, Length=373, Percent_Identity=32.171581769437, Blast_Score=167, Evalue=8e-42, Organism=Caenorhabditis elegans, GI17536103, Length=398, Percent_Identity=32.1608040201005, Blast_Score=167, Evalue=8e-42, Organism=Caenorhabditis elegans, GI17536101, Length=398, Percent_Identity=32.1608040201005, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17536099, Length=398, Percent_Identity=32.1608040201005, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17508543, Length=388, Percent_Identity=28.8659793814433, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17553716, Length=356, Percent_Identity=27.8089887640449, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI25148291, Length=344, Percent_Identity=29.6511627906977, Blast_Score=142, Evalue=5e-34, Organism=Caenorhabditis elegans, GI25148205, Length=329, Percent_Identity=29.1793313069909, Blast_Score=142, Evalue=5e-34, Organism=Caenorhabditis elegans, GI71982862, Length=206, Percent_Identity=31.5533980582524, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71997889, Length=400, Percent_Identity=27, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17557982, Length=387, Percent_Identity=26.8733850129199, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI71987152, Length=92, Percent_Identity=44.5652173913043, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI32564293, Length=351, Percent_Identity=23.6467236467236, Blast_Score=75, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6324778, Length=416, Percent_Identity=41.8269230769231, Blast_Score=300, Evalue=4e-82, Organism=Saccharomyces cerevisiae, GI6325138, Length=402, Percent_Identity=40.2985074626866, Blast_Score=285, Evalue=1e-77, Organism=Saccharomyces cerevisiae, GI6321360, Length=364, Percent_Identity=44.2307692307692, Blast_Score=276, Evalue=5e-75, Organism=Saccharomyces cerevisiae, GI6324217, Length=352, Percent_Identity=40.0568181818182, Blast_Score=273, Evalue=4e-74, Organism=Saccharomyces cerevisiae, GI6321856, Length=376, Percent_Identity=41.4893617021277, Blast_Score=263, Evalue=7e-71, Organism=Saccharomyces cerevisiae, GI6323021, Length=377, Percent_Identity=40.3183023872679, Blast_Score=256, Evalue=4e-69, Organism=Saccharomyces cerevisiae, GI6320173, Length=419, Percent_Identity=33.890214797136, Blast_Score=240, Evalue=4e-64, Organism=Saccharomyces cerevisiae, GI6320224, Length=371, Percent_Identity=34.7708894878706, Blast_Score=232, Evalue=8e-62, Organism=Saccharomyces cerevisiae, GI6320449, Length=379, Percent_Identity=35.3562005277045, Blast_Score=225, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6323947, Length=370, Percent_Identity=37.2972972972973, Blast_Score=223, Evalue=4e-59, Organism=Saccharomyces cerevisiae, GI6319714, Length=394, Percent_Identity=32.48730964467, Blast_Score=219, Evalue=9e-58, Organism=Saccharomyces cerevisiae, GI6320041, Length=371, Percent_Identity=32.8840970350404, Blast_Score=216, Evalue=6e-57, Organism=Saccharomyces cerevisiae, GI6324620, Length=361, Percent_Identity=35.4570637119114, Blast_Score=215, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6321963, Length=381, Percent_Identity=36.4829396325459, Blast_Score=211, Evalue=3e-55, Organism=Saccharomyces cerevisiae, GI6319618, Length=414, Percent_Identity=32.1256038647343, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6322912, Length=383, Percent_Identity=31.331592689295, Blast_Score=196, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6322323, Length=383, Percent_Identity=31.331592689295, Blast_Score=196, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6321111, Length=350, Percent_Identity=35.1428571428571, Blast_Score=196, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6322427, Length=362, Percent_Identity=34.2541436464088, Blast_Score=193, Evalue=6e-50, Organism=Saccharomyces cerevisiae, GI6321267, Length=378, Percent_Identity=34.6560846560847, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6320119, Length=396, Percent_Identity=31.8181818181818, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6320400, Length=413, Percent_Identity=31.4769975786925, Blast_Score=166, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6323306, Length=414, Percent_Identity=29.7101449275362, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6322876, Length=428, Percent_Identity=28.0373831775701, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6324366, Length=356, Percent_Identity=28.0898876404494, Blast_Score=113, Evalue=6e-26, Organism=Saccharomyces cerevisiae, GI6321374, Length=195, Percent_Identity=31.7948717948718, Blast_Score=84, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6323844, Length=355, Percent_Identity=22.2535211267606, Blast_Score=67, Evalue=5e-12, Organism=Drosophila melanogaster, GI17985987, Length=393, Percent_Identity=40.9669211195929, Blast_Score=295, Evalue=4e-80, Organism=Drosophila melanogaster, GI24584399, Length=369, Percent_Identity=42.8184281842818, Blast_Score=291, Evalue=6e-79, Organism=Drosophila melanogaster, GI24584994, Length=394, Percent_Identity=39.3401015228426, Blast_Score=285, Evalue=4e-77, Organism=Drosophila melanogaster, GI24642151, Length=370, Percent_Identity=39.4594594594595, Blast_Score=272, Evalue=5e-73, Organism=Drosophila melanogaster, GI21355075, Length=357, Percent_Identity=40.6162464985994, Blast_Score=271, Evalue=7e-73, Organism=Drosophila melanogaster, GI18857967, Length=422, Percent_Identity=36.2559241706161, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI28574962, Length=367, Percent_Identity=38.6920980926431, Blast_Score=265, Evalue=7e-71, Organism=Drosophila melanogaster, GI21356161, Length=370, Percent_Identity=40.2702702702703, Blast_Score=264, Evalue=9e-71, Organism=Drosophila melanogaster, GI24644479, Length=354, Percent_Identity=37.8531073446328, Blast_Score=259, Evalue=4e-69, Organism=Drosophila melanogaster, GI24644483, Length=354, Percent_Identity=37.8531073446328, Blast_Score=258, Evalue=6e-69, Organism=Drosophila melanogaster, GI281361218, Length=354, Percent_Identity=37.8531073446328, Blast_Score=258, Evalue=7e-69, Organism=Drosophila melanogaster, GI24644481, Length=354, Percent_Identity=37.8531073446328, Blast_Score=258, Evalue=7e-69, Organism=Drosophila melanogaster, GI24644487, Length=354, Percent_Identity=37.8531073446328, Blast_Score=258, Evalue=7e-69, Organism=Drosophila melanogaster, GI45551833, Length=354, Percent_Identity=37.8531073446328, Blast_Score=258, Evalue=7e-69, Organism=Drosophila melanogaster, GI24644485, Length=354, Percent_Identity=37.8531073446328, Blast_Score=258, Evalue=7e-69, Organism=Drosophila melanogaster, GI24662330, Length=350, Percent_Identity=40.5714285714286, Blast_Score=258, Evalue=8e-69, Organism=Drosophila melanogaster, GI24585582, Length=417, Percent_Identity=37.1702637889688, Blast_Score=257, Evalue=2e-68, Organism=Drosophila melanogaster, GI24645031, Length=390, Percent_Identity=35.1282051282051, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI17977678, Length=375, Percent_Identity=36.8, Blast_Score=240, Evalue=1e-63, Organism=Drosophila melanogaster, GI28575014, Length=363, Percent_Identity=36.0881542699724, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI281365720, Length=310, Percent_Identity=39.0322580645161, Blast_Score=227, Evalue=2e-59, Organism=Drosophila melanogaster, GI24582080, Length=382, Percent_Identity=35.0785340314136, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24582078, Length=382, Percent_Identity=35.0785340314136, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI17136248, Length=382, Percent_Identity=35.0785340314136, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24582075, Length=382, Percent_Identity=35.0785340314136, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI17136814, Length=370, Percent_Identity=38.9189189189189, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI24583281, Length=380, Percent_Identity=33.4210526315789, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24583279, Length=380, Percent_Identity=33.4210526315789, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI28571808, Length=363, Percent_Identity=37.1900826446281, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI28571809, Length=363, Percent_Identity=37.1900826446281, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI24666101, Length=355, Percent_Identity=35.7746478873239, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI24581954, Length=372, Percent_Identity=31.7204301075269, Blast_Score=192, Evalue=3e-49, Organism=Drosophila melanogaster, GI24581952, Length=372, Percent_Identity=31.7204301075269, Blast_Score=192, Evalue=3e-49, Organism=Drosophila melanogaster, GI24581956, Length=372, Percent_Identity=31.7204301075269, Blast_Score=192, Evalue=3e-49, Organism=Drosophila melanogaster, GI21355559, Length=385, Percent_Identity=34.2857142857143, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24642822, Length=409, Percent_Identity=31.7848410757946, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI20130173, Length=444, Percent_Identity=29.5045045045045, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24643725, Length=403, Percent_Identity=28.7841191066998, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI17647335, Length=360, Percent_Identity=29.7222222222222, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI28571338, Length=455, Percent_Identity=29.010989010989, Blast_Score=169, Evalue=6e-42, Organism=Drosophila melanogaster, GI18859659, Length=455, Percent_Identity=29.010989010989, Blast_Score=168, Evalue=6e-42, Organism=Drosophila melanogaster, GI24640164, Length=384, Percent_Identity=26.8229166666667, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI24668515, Length=337, Percent_Identity=28.7833827893175, Blast_Score=138, Evalue=7e-33, Organism=Drosophila melanogaster, GI17136666, Length=480, Percent_Identity=26.4583333333333, Blast_Score=129, Evalue=5e-30, Organism=Drosophila melanogaster, GI19920478, Length=341, Percent_Identity=30.2052785923754, Blast_Score=129, Evalue=5e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 54863; Mature: 54732
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFWRPERQYILTSFNELGLSEKIVASVTQLGYTTPTPIQAKAIPLLLEGRDLIGLAQT CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEECC GTGKTAAFGLPIIEMLMKQADRPANRTTRTLILAPTRELVNQIGDNLRSFVKKTPLRINQ CCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHH VVGGASINKQQLQLEKGTDILVATPGRLLDLIARNAISLSKVTYLVLDEADQMLDLGFIH HHCCCCCCHHHHHHCCCCEEEEECCHHHHHHHHHCCHHHHHEEEEEECCHHHHHHHHHHH DLRKISRMVPPKRQTLLFSATMPKAISELASNFLTDPIKVEVTPPGKAADKVEQYVHFVA HHHHHHHHCCCCHHEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHC GKNDKTDLLKKSLNENPDGRSIVFLRTKHGAEKLYKHLEHIGFKVASIHGNKSQGQRERA CCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHH LKGFKDGEIKVLVATDVAARGIDIPAVTHVFNYDLPEVPDAYVHRIGRTARAGRDGIAIA HCCCCCCCEEEEEEECHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEE FCAPDETRLLHDIEKLMKIDIPVASGERPAGLASPTRPNNNRGGRNNNGGQPRGPREGGR EECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HNGESRPSRNHAPRDADNDLEVTSDFKRVKQAEGDAGRPAGPRKQRRPARKPGGSGANRH CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCC APAGGNGQEKRASGNGNRGRNR CCCCCCCCHHCCCCCCCCCCCC >Mature Secondary Structure SLFWRPERQYILTSFNELGLSEKIVASVTQLGYTTPTPIQAKAIPLLLEGRDLIGLAQT CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEECC GTGKTAAFGLPIIEMLMKQADRPANRTTRTLILAPTRELVNQIGDNLRSFVKKTPLRINQ CCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHH VVGGASINKQQLQLEKGTDILVATPGRLLDLIARNAISLSKVTYLVLDEADQMLDLGFIH HHCCCCCCHHHHHHCCCCEEEEECCHHHHHHHHHCCHHHHHEEEEEECCHHHHHHHHHHH DLRKISRMVPPKRQTLLFSATMPKAISELASNFLTDPIKVEVTPPGKAADKVEQYVHFVA HHHHHHHHCCCCHHEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHC GKNDKTDLLKKSLNENPDGRSIVFLRTKHGAEKLYKHLEHIGFKVASIHGNKSQGQRERA CCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHH LKGFKDGEIKVLVATDVAARGIDIPAVTHVFNYDLPEVPDAYVHRIGRTARAGRDGIAIA HCCCCCCCEEEEEEECHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEE FCAPDETRLLHDIEKLMKIDIPVASGERPAGLASPTRPNNNRGGRNNNGGQPRGPREGGR EECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HNGESRPSRNHAPRDADNDLEVTSDFKRVKQAEGDAGRPAGPRKQRRPARKPGGSGANRH CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCC APAGGNGQEKRASGNGNRGRNR CCCCCCCCHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]