Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889599
Identifier: 15889599
GI number: 15889599
Start: 2299754
End: 2300497
Strand: Reverse
Name: 15889599
Synonym: Atu2322
Alternate gene names: NA
Gene position: 2300497-2299754 (Counterclockwise)
Preceding gene: 15889600
Following gene: 15889597
Centisome position: 80.96
GC content: 60.89
Gene sequence:
>744_bases ATGATCTTTGCCGCGATTGCCGATATTCACGGAAACTGCGCCGCACTGGAAGCCGTGCTCGAGGATATTGCGAAGCTGGG CATCAAGGACATCGTCAATCTCGGCGATTGTTTCAGTGGCCCGCTGGAGGCAGGTTTCACCGGCGACGTCTTGGTTGGCA ACTGGATACCCAGCATTCGCGGCAATCATGACCGGGAACTGATCGAGCGCGCGCCGGAGAACATGGGTAGTTGGGAGAAG CCGGCCCATGCGCAGCTCACCGCAGCACATCTGGACTGGCTGCATACGTTACCTTTCAGCATGGTGTTCAGGGATGTCGC CTATTGCTGCCACGGTTCGCCGCTCGGCGATCTCGACTACTGGCTGGAAACGCTGTCGCCGGAAGGCGTGCTGAAACTGC GGCCGCTCGCCGAGATCGAGGAGAGGGCGGAAGGCATCACCCAGCCGCTGATGCTGTGTGGCCACACGCATATTCCCCGC GCGGTGCAGCTTTCCGATGGCCGGCTAATCGTCAATCCCGGCAGCGTCGGATGCCCCGGCTGGAAGGACGACACACCTTT CGACCACCATGTCGAGGCCGGTCATGCGCTCGCCACCTATGCCGTGCTGGAAGAGACGGGGCGTGGCTGGCAGGTCTATT TCCGGAATATCCGCTACGATAATCTGGCCATGTCTGAAATGGCGCGCGTGAACGGCATCCCGTATCTGGCGGATGCGTTG ACGAACGGGTGGCTCAAGCGCTGA
Upstream 100 bases:
>100_bases TCCCCATCCGCTTCGGCATTGCCGACGAGAGCGGCCATTATCATGTGCCGCTTCTGCTTTCGCCCTATAGCTATTCCACC TATCGAGGAAGCTGATAGCC
Downstream 100 bases:
>100_bases ATCACCCCTCGCTGGTCATCACCACGCAGGCATAGGATTGCGCCTTCAGTTCCTTGCAGGCGGATACGGCCGAAGACTGG TCTTCGAAGCCGGTGAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphoesterase; Phosphodiesterase; DNA Repair Protein; Ser/Thr Protein Phosphatase Family Protein; Diadenosine Tetraphosphatase; Calcineurin Superfamily Metallophosphoesterase; Metallophosphoesterase Calcineurin Superfamily; Serine/Threonine Protein Phosphatase
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MIFAAIADIHGNCAALEAVLEDIAKLGIKDIVNLGDCFSGPLEAGFTGDVLVGNWIPSIRGNHDRELIERAPENMGSWEK PAHAQLTAAHLDWLHTLPFSMVFRDVAYCCHGSPLGDLDYWLETLSPEGVLKLRPLAEIEERAEGITQPLMLCGHTHIPR AVQLSDGRLIVNPGSVGCPGWKDDTPFDHHVEAGHALATYAVLEETGRGWQVYFRNIRYDNLAMSEMARVNGIPYLADAL TNGWLKR
Sequences:
>Translated_247_residues MIFAAIADIHGNCAALEAVLEDIAKLGIKDIVNLGDCFSGPLEAGFTGDVLVGNWIPSIRGNHDRELIERAPENMGSWEK PAHAQLTAAHLDWLHTLPFSMVFRDVAYCCHGSPLGDLDYWLETLSPEGVLKLRPLAEIEERAEGITQPLMLCGHTHIPR AVQLSDGRLIVNPGSVGCPGWKDDTPFDHHVEAGHALATYAVLEETGRGWQVYFRNIRYDNLAMSEMARVNGIPYLADAL TNGWLKR >Mature_247_residues MIFAAIADIHGNCAALEAVLEDIAKLGIKDIVNLGDCFSGPLEAGFTGDVLVGNWIPSIRGNHDRELIERAPENMGSWEK PAHAQLTAAHLDWLHTLPFSMVFRDVAYCCHGSPLGDLDYWLETLSPEGVLKLRPLAEIEERAEGITQPLMLCGHTHIPR AVQLSDGRLIVNPGSVGCPGWKDDTPFDHHVEAGHALATYAVLEETGRGWQVYFRNIRYDNLAMSEMARVNGIPYLADAL TNGWLKR
Specific function: Unknown
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27232; Mature: 27232
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFAAIADIHGNCAALEAVLEDIAKLGIKDIVNLGDCFSGPLEAGFTGDVLVGNWIPSIR CEEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCC GNHDRELIERAPENMGSWEKPAHAQLTAAHLDWLHTLPFSMVFRDVAYCCHGSPLGDLDY CCCHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH WLETLSPEGVLKLRPLAEIEERAEGITQPLMLCGHTHIPRAVQLSDGRLIVNPGSVGCPG HHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCCCCC WKDDTPFDHHVEAGHALATYAVLEETGRGWQVYFRNIRYDNLAMSEMARVNGIPYLADAL CCCCCCCCCHHHCCHHHHHHHHHHHCCCCEEEHEECCCCCHHHHHHHHHHCCCCHHHHHH TNGWLKR HHHHCCC >Mature Secondary Structure MIFAAIADIHGNCAALEAVLEDIAKLGIKDIVNLGDCFSGPLEAGFTGDVLVGNWIPSIR CEEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCC GNHDRELIERAPENMGSWEKPAHAQLTAAHLDWLHTLPFSMVFRDVAYCCHGSPLGDLDY CCCHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH WLETLSPEGVLKLRPLAEIEERAEGITQPLMLCGHTHIPRAVQLSDGRLIVNPGSVGCPG HHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCCCCC WKDDTPFDHHVEAGHALATYAVLEETGRGWQVYFRNIRYDNLAMSEMARVNGIPYLADAL CCCCCCCCCHHHCCHHHHHHHHHHHCCCCEEEHEECCCCCHHHHHHHHHHCCCCHHHHHH TNGWLKR HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA