Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889594
Identifier: 15889594
GI number: 15889594
Start: 2295279
End: 2295875
Strand: Reverse
Name: 15889594
Synonym: Atu2317
Alternate gene names: NA
Gene position: 2295875-2295279 (Counterclockwise)
Preceding gene: 15889596
Following gene: 159185154
Centisome position: 80.8
GC content: 45.9
Gene sequence:
>597_bases GTGGAATTGTTGCTCATGTCATCTTCCTTTTTTAAAATTCTTGCAGCCTCTCTTTTATCTCCAAATATTGCTCTCGCAGC AGAGTGCCCTACGATTAAGAGCGACAAGAATGGATTTGTACTCAGTCACAGTGGCGTGCAAAGCGCGTTCAAAACAGCGG GGCCTGTCGTTTCCGTAGAACATGGCTTTGCTGACGGCGGAAAACAAAAGGCATTTCTTTATCAAGGCCTTATCGAAATT TCTCGTTCGGGAAGTGACGAAGATTACAATGCTTATTTCACATCAAATCTTTCTTCTTTCTGGCCTCTGAAAGTCGGTGC CCGCCGGACTTTCGACTTCATTCCGCTGAAGGTTGATGCCTTTAAGGAGAAGTGGACTCTGAGTCTTAACGTTACAAAAC GGCGATCTTTTTCTATTGGCTACTGCAGTTATGATGTTTTTAACGTGGTTTACGACGTCAGGAGAAACGACGAGGAAGTC GAGCGGTGGACCGCGGTTTATGCGCCTGATCTGCTTGCAACGGTTGCAAAGATCTACGACGAAGGTACCAATAACGAAGA AACCGTGAGCTACACGGCGATCAAGCCGCTAAAATAA
Upstream 100 bases:
>100_bases GTTCGTCGATCGTAGTTTTAGGGTTTTTTGAATCGCTTGTATCTAGAAATCAGAGTTGAGTTTTCATTAGAAACCGGCAA TCTGTAGTTACCTTATCTCC
Downstream 100 bases:
>100_bases GGTGCTTGCCGGTTTGGCCACAGCACGGGTTAACTCCAGAAAGCTCGAAAGAATAATTCAACGCCCAACACGAGCAGGCA GATGAGAAACCAGCGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MELLLMSSSFFKILAASLLSPNIALAAECPTIKSDKNGFVLSHSGVQSAFKTAGPVVSVEHGFADGGKQKAFLYQGLIEI SRSGSDEDYNAYFTSNLSSFWPLKVGARRTFDFIPLKVDAFKEKWTLSLNVTKRRSFSIGYCSYDVFNVVYDVRRNDEEV ERWTAVYAPDLLATVAKIYDEGTNNEETVSYTAIKPLK
Sequences:
>Translated_198_residues MELLLMSSSFFKILAASLLSPNIALAAECPTIKSDKNGFVLSHSGVQSAFKTAGPVVSVEHGFADGGKQKAFLYQGLIEI SRSGSDEDYNAYFTSNLSSFWPLKVGARRTFDFIPLKVDAFKEKWTLSLNVTKRRSFSIGYCSYDVFNVVYDVRRNDEEV ERWTAVYAPDLLATVAKIYDEGTNNEETVSYTAIKPLK >Mature_198_residues MELLLMSSSFFKILAASLLSPNIALAAECPTIKSDKNGFVLSHSGVQSAFKTAGPVVSVEHGFADGGKQKAFLYQGLIEI SRSGSDEDYNAYFTSNLSSFWPLKVGARRTFDFIPLKVDAFKEKWTLSLNVTKRRSFSIGYCSYDVFNVVYDVRRNDEEV ERWTAVYAPDLLATVAKIYDEGTNNEETVSYTAIKPLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22070; Mature: 22070
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLLMSSSFFKILAASLLSPNIALAAECPTIKSDKNGFVLSHSGVQSAFKTAGPVVSVE CEEEEECHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHCCCEEEEE HGFADGGKQKAFLYQGLIEISRSGSDEDYNAYFTSNLSSFWPLKVGARRTFDFIPLKVDA CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEECCCCCCEEEEEEEEEC FKEKWTLSLNVTKRRSFSIGYCSYDVFNVVYDVRRNDEEVERWTAVYAPDLLATVAKIYD CCCEEEEEEEEEECCCEEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHC EGTNNEETVSYTAIKPLK CCCCCCCEEEEEEECCCC >Mature Secondary Structure MELLLMSSSFFKILAASLLSPNIALAAECPTIKSDKNGFVLSHSGVQSAFKTAGPVVSVE CEEEEECHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHCCCEEEEE HGFADGGKQKAFLYQGLIEISRSGSDEDYNAYFTSNLSSFWPLKVGARRTFDFIPLKVDA CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEECCCCCCEEEEEEEEEC FKEKWTLSLNVTKRRSFSIGYCSYDVFNVVYDVRRNDEEVERWTAVYAPDLLATVAKIYD CCCEEEEEEEEEECCCEEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHC EGTNNEETVSYTAIKPLK CCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA