Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889579
Identifier: 15889579
GI number: 15889579
Start: 2278094
End: 2279077
Strand: Direct
Name: 15889579
Synonym: Atu2303
Alternate gene names: NA
Gene position: 2278094-2279077 (Clockwise)
Preceding gene: 159185148
Following gene: 159185152
Centisome position: 80.17
GC content: 60.26
Gene sequence:
>984_bases ATGTTTCGCCCCTTTGCCGCTTTTTCTCTGTCGCTTCTCGCCGCCCTTCCTGCACTTGCGCAGGAGGCGCAGAAGCCGAA GCAGTTGGTCATCGTCTCCTTCGACGGTGCGGGCGACAATACGCTGTGGGAAAGAAGCCGGGCGACGGGCAAGCAGGTCG GCGCGCATTTCACCTATTTTCTCGCCTGCACGCTGGTGATGGACCGCAAGACCAGCGCCAAGACCTATCAGGGACCGGGC CAGAAGGCCGGCCGCTCCAATGTCGGCTTCGGGCAGTCACAGGAAGAGGTGGAAACGAGGCTGAGAAACATCTGGGCCGC CTATCGTGAAGGCCACGAGATCGGCAACCATACCTGCGGCCATTTCGATGGCGGGCAGTGGACCGCCGAACAATGGGATG GCGAATTCACCACCTTCACCAGTACCCTGGAAAATGCCTGGCAGATGATCGGCAAGAAGGGCGAGGAGCCCGAAGGCTGG CGCGATATGGTCAAGAAGATCAATGGTTTCCGCGCCCCCTATCTGTCGCAGGGCCCGGCGCTAACTGCCGCGCAGAAGAA GCACGGCTTCGTTTATGACGCCACCAGCATCACCAAGGGGCCGGAATGGCCGGTGGAGCGCGAAGGCATCCAGCATTTCG GCCTGCCGCTCATTCCAGAGGGGCCCGGCAACCGCCCGATCATCGCCATGGACTACAATCTCTTCATCCGCCACTCCATC GGCATCGAAACGCCTGACCGTGCCGGGGAATTTGAGGAGCGCGCCTATACGGCCTTCCGCAATGCATTCGACAGGCAATA TAATGGCGAGCGCATTCCGTTGCAGATGGGCTTTCACTTCGTGAAGATGAATGGCGGCGCTTATTGGAATGCCTATGAGC GGCTGCTGCGCGAAGTCTGCCAGAAAGAGGATGTGGCCTGCGTCAGCTATGCCGAGGCGATGCCGATGATCGAGGCGCGC AGGAAGCAGAAGACGGAGGGTTAA
Upstream 100 bases:
>100_bases AACAGGAATTAGGCTGAAAGCCATGAAAACGCCAGCCACTTCAAAGCTTCGCCTTATTCCACCCGCAAAAGGCCACGGTG TTTCATATGACGGATAACTG
Downstream 100 bases:
>100_bases GGCCCCCGTTTCACGAAAAAGGCGGCCGATTGGCCGCCTTTTTATATGTTTTAGGGCTTATTTGCCGCCAGTTCACCAGC TTCCGCTTCCCGTTGCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Polysaccharide Deacetylase; Lipoprotein
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MFRPFAAFSLSLLAALPALAQEAQKPKQLVIVSFDGAGDNTLWERSRATGKQVGAHFTYFLACTLVMDRKTSAKTYQGPG QKAGRSNVGFGQSQEEVETRLRNIWAAYREGHEIGNHTCGHFDGGQWTAEQWDGEFTTFTSTLENAWQMIGKKGEEPEGW RDMVKKINGFRAPYLSQGPALTAAQKKHGFVYDATSITKGPEWPVEREGIQHFGLPLIPEGPGNRPIIAMDYNLFIRHSI GIETPDRAGEFEERAYTAFRNAFDRQYNGERIPLQMGFHFVKMNGGAYWNAYERLLREVCQKEDVACVSYAEAMPMIEAR RKQKTEG
Sequences:
>Translated_327_residues MFRPFAAFSLSLLAALPALAQEAQKPKQLVIVSFDGAGDNTLWERSRATGKQVGAHFTYFLACTLVMDRKTSAKTYQGPG QKAGRSNVGFGQSQEEVETRLRNIWAAYREGHEIGNHTCGHFDGGQWTAEQWDGEFTTFTSTLENAWQMIGKKGEEPEGW RDMVKKINGFRAPYLSQGPALTAAQKKHGFVYDATSITKGPEWPVEREGIQHFGLPLIPEGPGNRPIIAMDYNLFIRHSI GIETPDRAGEFEERAYTAFRNAFDRQYNGERIPLQMGFHFVKMNGGAYWNAYERLLREVCQKEDVACVSYAEAMPMIEAR RKQKTEG >Mature_327_residues MFRPFAAFSLSLLAALPALAQEAQKPKQLVIVSFDGAGDNTLWERSRATGKQVGAHFTYFLACTLVMDRKTSAKTYQGPG QKAGRSNVGFGQSQEEVETRLRNIWAAYREGHEIGNHTCGHFDGGQWTAEQWDGEFTTFTSTLENAWQMIGKKGEEPEGW RDMVKKINGFRAPYLSQGPALTAAQKKHGFVYDATSITKGPEWPVEREGIQHFGLPLIPEGPGNRPIIAMDYNLFIRHSI GIETPDRAGEFEERAYTAFRNAFDRQYNGERIPLQMGFHFVKMNGGAYWNAYERLLREVCQKEDVACVSYAEAMPMIEAR RKQKTEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36846; Mature: 36846
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRPFAAFSLSLLAALPALAQEAQKPKQLVIVSFDGAGDNTLWERSRATGKQVGAHFTYF CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH LACTLVMDRKTSAKTYQGPGQKAGRSNVGFGQSQEEVETRLRNIWAAYREGHEIGNHTCG HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC HFDGGQWTAEQWDGEFTTFTSTLENAWQMIGKKGEEPEGWRDMVKKINGFRAPYLSQGPA CCCCCCEEHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC LTAAQKKHGFVYDATSITKGPEWPVEREGIQHFGLPLIPEGPGNRPIIAMDYNLFIRHSI CCHHHHHCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCEEEEEEC GIETPDRAGEFEERAYTAFRNAFDRQYNGERIPLQMGFHFVKMNGGAYWNAYERLLREVC CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCEEEEEECCCEEHHHHHHHHHHHH QKEDVACVSYAEAMPMIEARRKQKTEG HCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFRPFAAFSLSLLAALPALAQEAQKPKQLVIVSFDGAGDNTLWERSRATGKQVGAHFTYF CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH LACTLVMDRKTSAKTYQGPGQKAGRSNVGFGQSQEEVETRLRNIWAAYREGHEIGNHTCG HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC HFDGGQWTAEQWDGEFTTFTSTLENAWQMIGKKGEEPEGWRDMVKKINGFRAPYLSQGPA CCCCCCEEHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC LTAAQKKHGFVYDATSITKGPEWPVEREGIQHFGLPLIPEGPGNRPIIAMDYNLFIRHSI CCHHHHHCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCEEEEEEC GIETPDRAGEFEERAYTAFRNAFDRQYNGERIPLQMGFHFVKMNGGAYWNAYERLLREVC CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCEEEEEECCCEEHHHHHHHHHHHH QKEDVACVSYAEAMPMIEARRKQKTEG HCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA